Basic Information

Gene Symbol
Arid4b
Assembly
None
Location
scaffold:14694-22374[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.2e-29 1.8e-25 89.1 0.1 1 89 297 384 297 384 0.94

Sequence Information

Coding Sequence
ATGCTGGGAGACGATCCACCATACCTGTCGGTGGGCACGGAAGTCAGTGCCAAGTACAAGGGTGCTTTTTGTGAAGCTAAAATCCGTAAAGTTGTACGTTCAGTTAAATGTAGAGTAACTTACAAACAGGGTCTAGGTACTGCAACTGTTACGGATGATCAAATAAAAGGAACATTAAGAGTTGGAGCTTCTGTAGAGGCTCGTCATGTCGACAAAAAAGAATTCGTTGAGGCGACTATCACCAAGATCCAGGATTGCAGTCAGTACACGGTAGTCTTTGATGATGGTGACATAACAACACTGAGACGCACGGCTTTGTGCTTGAAGAGTGGCAGACACTTTGCTGAGAGTGAGACTTTGGACCAGCTGCCGTTGACACATCCTGAGCACTTTGGTAATCCGGTGATTGGAGGTAGACGTGGCAGACGTTCGAGGCAAGCACATCCACCACGTGGAAGTCCCTCTGGCTCGGGTCTCGGCGGCAAAGAAGGAGCAGAAACAGAGCCTGAAATTGGACGAGTTGTTTGTGTTGAATTGGGTGACAAGAAGAAGAAAGACAATTGGTTTCCCGGATTAGTTGTTGCTCCAACTGCTCAAGACACTGTTAGAATACGTGTTCGTGATGATTATCTAGTTAGATCCTTCAAGGATGCTAGATATTATACTGTCCCGAAGAAAGAAGCCACTGAATTTACCAAGGAATTGGGTACAAAAGTTGAAAATAGCGTTTTAAAAGACGCTGTTACTAAAGCGTTAAATTTTCTGGAGAAAAATGAATTACCACCTCACTGGGATCGTGATTCATTGTTTGGTAATAGCATGTCCAGTGGTAATAGTGATACAGATGGTGATTTAGATTCAGACAGCTCAGATGATGAGCCACGTGAAGAGAAAGATCATTTTGTAGCTCAATTGTATAAATTTATGGATGATCGAGGCACTCCAATTAATAATTGTCCTATGATTGGCAATGAGGATATTGATTTGTATCGTTTGTTTCGAGCTGTTGAAAAATTAGGCGGCTATAATCGTGTAACTAATCAAAATCAGTGGAAATCAATAACACGAAGGCTCGGAATTTCAATGCAACCAACTCAAGCTACCCACAATCTTGTTAAGCAGGCGTACAAAAAATTTTTACACTCTTTTGAAGATTTTTACAGAAAGCTTGGCTGTACTATGGTCAATCATCCGAGAGGCAGTACACGTAAACAAAGGCCTGGAAGAAGTCTTATTAGAGACAAAGATCGTAACACACCAGTTCCAACAGCTCATCAAAATATTCCTAAAACAGAGAAAGAAAAAGCTGAAGGTGATGAAGAGCACAAAGAAAAGAAAATTTCTGTTGATGAAGAAAAACCTATCAGTAGTGAGTCCAGTGCACCTCGAGACATTGTCAAAGAGGAAGAACCGACGAAATCTGTTAAGAAAAAAGAAATTGTTGAAGAGCCTGTTAGCGGACAGGAGAGTGATATTGTAGATATTAATGTAGAAGCCGAGAGTACTGAATCTTCAAGCAGTGAAAAGTCACAAAAACCTCCTGCAAGATTCACTCCGGTATCTCTGAGCCGGGCTAAATCATTAACAACTACACCGTCAACTACCGTAATAACTTCTGCAGTAACAACAGCAACGCCAACGTTTACTACAACAGCAACAGGTAAAAATAAAGAAGAATCTAAAAAAAAGACTTATGAAAAGAAAAAACAAGAGGGAAATTCATCATCATCTAGTTCCGGTGCTAGCGTGACCGGAAAGAAAGAAATTTCTAAAAAAGACGAGGAAACAACAAAGACCCGTTCAAAGTCTAAAGAAGACACTAAAGTAAAGGACTCGCGTGAAACACGTACGCCCTCGCGTGAGTCGGAAAAAACTCGTGGTAATTCTTTGAAACCACGACGTCTAACAGACGATGAACTTAAAAAACAGCAGCGAGGACGGAAAAAACGAGAAGACACTGAAAAATCTCGCGTTGATAAAGATGAAAGTAGTGGAGCTGAAAGTTCTTCAGCACCGTGTTATAAGGGTCCAGTGCAATTAGGTGACAGGCTTAAAGTTTATTATGGACCAACCCATGAATCTAAAGTAACTTATGAGGCAAAAGTTATTGGAGTTGAATCTCTTGATGGCTCTGAAGAAATGAATTATCTCGTTCATTATACAGGCTGGAATACGAGATATGATGAATGGATCAAAGCTGGGAGAATAGCGCAAAATTTTACACAAAGTCAGGCAAGAGTTCGGAGAACCAAGGCAACACCGAGACCTCAAACTCCCAGTACAAGCTCAAGTAAATCTGCTAAAACACCAACCACTGGCTTGCAAGGTGGTAGACGTAGAGCTCAAAGTGTTGCACCGACTACTTCGAAAACTTTTTCATCGACAACTTCAACAAGTAGTTCAGCTTCATCTGTAAATAATAAAGACAATAAAGAATCATCTCAACCAGCAAGATCTACTACACCTTTGTCGGTTAACAGTTTTAGCTCTCGAACTAAAAGTCCAGCCACTCCAGCAGGCAGTCGACCGACTAGAAATACAAGGAATGCCGAACAATTGGGCATTGAATTACGTAGACGTACCAGAAGAATGTCTGGACACACTGATTTGTCGGTGGTAACTGAAAGTGAAGACAGTGATGCTTATGAGACTGATACTACAGAACCTGAAAGAGCTAGAACGAGATCGCGAGGCACTGAGGAACGTAGAAGACGAGAAGTAAGACGCAGAGTTGAAGATAGAATAAAACCAGATGAAAATAGCGAAGTTGAGGATGAAAAAGACGCTCTCAAAGGTTTTGATAAGGCTGTTAAAATGGATATATTGAGAATGGAGCCTGAAAATTCTGGAGATGAAGACTCCAAATCACGTGTTGAAGATCTTCAAAAAGAAATTAAAGAGGAGAAGAAAAAAATTAAAGATATTAAAGTTGAAGAAACAGTTGATATAAAACCAGCTGTCGAGACACTTGCTATTAAAGCTGATCCATCGCCTTCGCCTACTGAGGACGTTTATGAATTTAAAGAACCTGAACCATTTGAGTTTGAAGTGAGAAACAAACGAGACTCTTCAGGTGATAAAGATAAATTGAAAAAGCGGGTCTTTGATGAAGAACCTAAAAGTCCGAAAAAGAAGCAAAAAACTTCAGTAACTAGTCCAAAAGAAACTAAATCAGAAATTGAGGTTGATTCTAAACGTAAGGCCAGAAGAACGCCTGTTAAACGTCTTGAAGAGACTCCAGAAGTTATTAAACCGATTATTGTCCCCACGCCGAAAGAGTTTGAAAAAGTCATCGAACCTCCTACGCTGATACCATCAAAAGCAACATCTGTTACTCTTTCGCCGCTGACTTTAGTCTCGGCAGTTATTGTTGAAGAACAAACTAAGAATAGTTCTAGCATTGAGTTGTTTAATGATTCGACGAGCAATGACGATGGAACTGGAGATGTTGATGATCCAGAAGACCGTTTGATTATTTCTGAAACAGAAGTGTCTGAGACTGAAAATGAAAATCCACCGTCGACTTATCAACAAGAAATATTGCCAAGTGTTGAAGCTCCCAATAAAAATGAGTTTAATAAAAAAGTTGAAAATAATAAAGATAAAGAAGAGAAACATACAAGTTCTAATGTCCCCAGTACCAGTGGTATGCCTACAATTACATCCTCAGTAGATTCATTACCACTTTCGGATGATACTAGGGTAGGATATGAGCCAAAACAATGGGTTATGAAGCCTATGAATTACAAAAATCCATGGGGCAATGAAATAAAACTACCACCACCACCACCACCACCACCACCACCACCACCACCAACACTAACACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCAACAACACCAACAACACCAACAACACCAACAACACCAACACCACCAACACCACCACCGCCGCCGCCGCCATCTTCTCCTGCAGTCATTGATAAAAAAGTTGTTGAGGTAAAGCCACCGATAATTGAAAGAAAAATTGTTGATACAAAGCCACCGACTATTGAAAGGAAAGTTATTGATGTTAAGCCACCAACTTTGCCACAATCTAACAGTGATGTTAAACCATCAGTGATTGAAAAGAAAACATCTGATAGTAAATCACCATCTAATGATAAACTTGTTGACATAAAGTCATCGTCAACTATTGCTTCTTTAACTACTACAACTTTAGGATCACCTATTGTACTTGCTCCAATCAGTGCCAGATTACCAGCTACTTCGACTATCGAAGAAAAATTATCAGCTGCAGCTATGGCATTCAGACAATCAAAGCCCAGAGATTCTAAACGTGATGACGAGTCAAGTGAGTCAAAGAAAAATTCCAAAGATAGCTCTAAGAAAACTGAAACGCATGGAAAAAGAACAAGAGTTATAAATGATGAGCAAGCTAAACTTAAGCAAGAATTGAAAAGAAGGAAAGAACTGGAGGCAGTTTTGGAAGAAATTTTGGAAAAACGTTCTAGAGAAGCTATAAGAGCTACTTTGAAACAAAAAGAAGATGAACTTGAGCAATTGAAAATTCATAAAGAAGATTTAAAGAAAGTTGCTGATGTTAAAATTGATCAAAGAAAAATTGTTGATAAACGTGAAGACTTGTGGAAAAAGAAGGATAAAGTTGATATAATGGACGTTGAGGTTTCTAAAGAAATTCCTGCTGAGCCCAAGGAGAATGAAAAACAAAAACGTAAAAAAGTTTTAAGTCAAGAGTTTGTTGATTCAACCGATAGCAGTGATTCGGAGCAGAAACTTGTTATTGATAGCTCACAAGTTAAAGAAGATAGACATGAATCGTCTGATTTTGAGGGTAAAGTTAAATCTGAGATTGAACTTTATCCAGAGGCACGTCCGGATCATCATCAACAAGTATCCAGTATTGTCACCCAGCATGAACAGTCAATTAATTCTACAAAGAGTGTTATGAGTGTGAAAACCGAGGAGGAAGGTGAAAATATGAATTTACTCTGTGAAGAAGAGATTCCAGGTTCTCCTGCACCTGTAATTGATACAACGGAGCAGGAACGACCAGGAGATCATCACCATCACCACCACCACCACCACCACCACCACCACCATAATTTAATAAAAAATGAATCAAATGAAAAGAAACTTGTGCTTTTAGAAATGCCGTTTGCCAGCGCCCCGGCACTAGGACCTCAGAGCAGCAGTACCAGCCAAGGATCAATCAATGAAGCTGCTCCTGTGATGGACAATACACCGCCAACCACACCAGACTCAACTATTTCTAACATATCTACGTCTCCGAGGGGTGACGAGAGAACTGGTGGATCTTCGCCCCTGTCTGATGAAAATATTAAATTAAATCGCGACACTTCGGAGGCGGACAACGATAGTGCTGGTAAAGCTCCCTCGGGATACAGCGAAGACGACGCTACTTTAAACACTGACGGAACTACTGCCGAAAGAGGCTCCTCTAAAGCAATCAAGAGATCCGCTGAAGATCCAGCGTCGCCCAAGAAGAAAAAACGGAGTCGTAAAAGCTCAGAGTGTGGAAGCAATGCTGGAAGAAAAACCAGTGGCAGACACTCGGCCAGACAAACCAGACAAAGCAGTGCTGCTGGAAGTGACAGTGATGACACTAGTGAGGGATCGAGTTCAGCTAATAATATTAATAATAATGGTAATATTAATACGAACAGTAGTCATTCGTCGACGGTTGTCATTGAAAGTACGAATACTGCATCCACTACGACGACAACGGCAACTACTAATGGAATTACAGATCTCAATAGTATATCTTCTCGATCTCCCAAACCGATGAAGTACAACTTTTATGTAGAGCTAGATCCTCAACTGGACGGTAGCCAAAGGATAGCTTTACTTCAACAAAAACTTACAGAGTTGAAGAATACTTATAATACAGTAAAGTTGGAATTAGCGGCCATTGAGAGGCGGAGAAAAAAATTACGGAGAAGAGAAAGAGAAGCAATGAAAGCCGCAAAAGCAGAAATGCAACAAGCGTGTTCTTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVGASVEARHVDKKEFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAHPPRGSPSGSGLGGKEGAETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELGTKVENSVLKDAVTKALNFLEKNELPPHWDRDSLFGNSMSSGNSDTDGDLDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVEKLGGYNRVTNQNQWKSITRRLGISMQPTQATHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSTRKQRPGRSLIRDKDRNTPVPTAHQNIPKTEKEKAEGDEEHKEKKISVDEEKPISSESSAPRDIVKEEEPTKSVKKKEIVEEPVSGQESDIVDINVEAESTESSSSEKSQKPPARFTPVSLSRAKSLTTTPSTTVITSAVTTATPTFTTTATGKNKEESKKKTYEKKKQEGNSSSSSSGASVTGKKEISKKDEETTKTRSKSKEDTKVKDSRETRTPSRESEKTRGNSLKPRRLTDDELKKQQRGRKKREDTEKSRVDKDESSGAESSSAPCYKGPVQLGDRLKVYYGPTHESKVTYEAKVIGVESLDGSEEMNYLVHYTGWNTRYDEWIKAGRIAQNFTQSQARVRRTKATPRPQTPSTSSSKSAKTPTTGLQGGRRRAQSVAPTTSKTFSSTTSTSSSASSVNNKDNKESSQPARSTTPLSVNSFSSRTKSPATPAGSRPTRNTRNAEQLGIELRRRTRRMSGHTDLSVVTESEDSDAYETDTTEPERARTRSRGTEERRRREVRRRVEDRIKPDENSEVEDEKDALKGFDKAVKMDILRMEPENSGDEDSKSRVEDLQKEIKEEKKKIKDIKVEETVDIKPAVETLAIKADPSPSPTEDVYEFKEPEPFEFEVRNKRDSSGDKDKLKKRVFDEEPKSPKKKQKTSVTSPKETKSEIEVDSKRKARRTPVKRLEETPEVIKPIIVPTPKEFEKVIEPPTLIPSKATSVTLSPLTLVSAVIVEEQTKNSSSIELFNDSTSNDDGTGDVDDPEDRLIISETEVSETENENPPSTYQQEILPSVEAPNKNEFNKKVENNKDKEEKHTSSNVPSTSGMPTITSSVDSLPLSDDTRVGYEPKQWVMKPMNYKNPWGNEIKLPPPPPPPPPPPPPTLTPXXXXXXXXXXPTTPTTPTTPTTPTPPTPPPPPPPSSPAVIDKKVVEVKPPIIERKIVDTKPPTIERKVIDVKPPTLPQSNSDVKPSVIEKKTSDSKSPSNDKLVDIKSSSTIASLTTTTLGSPIVLAPISARLPATSTIEEKLSAAAMAFRQSKPRDSKRDDESSESKKNSKDSSKKTETHGKRTRVINDEQAKLKQELKRRKELEAVLEEILEKRSREAIRATLKQKEDELEQLKIHKEDLKKVADVKIDQRKIVDKREDLWKKKDKVDIMDVEVSKEIPAEPKENEKQKRKKVLSQEFVDSTDSSDSEQKLVIDSSQVKEDRHESSDFEGKVKSEIELYPEARPDHHQQVSSIVTQHEQSINSTKSVMSVKTEEEGENMNLLCEEEIPGSPAPVIDTTEQERPGDHHHHHHHHHHHHHHNLIKNESNEKKLVLLEMPFASAPALGPQSSSTSQGSINEAAPVMDNTPPTTPDSTISNISTSPRGDERTGGSSPLSDENIKLNRDTSEADNDSAGKAPSGYSEDDATLNTDGTTAERGSSKAIKRSAEDPASPKKKKRSRKSSECGSNAGRKTSGRHSARQTRQSSAAGSDSDDTSEGSSSANNINNNGNINTNSSHSSTVVIESTNTASTTTTTATTNGITDLNSISSRSPKPMKYNFYVELDPQLDGSQRIALLQQKLTELKNTYNTVKLELAAIERRRKKLRRREREAMKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-