Basic Information

Insect: Cotesia congregata
Gene Symbol: L_1
Assembly: None
Location: contig:19811827-19820855[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.2e-06 0.00014 22.7 1.1 1 23 102 124 102 124 0.98

2 18 0.54 64 5.0 3.9 1 23 130 152 130 152 0.97

3 18 8.7e-07 0.0001 23.2 2.3 1 23 158 180 158 180 0.99

4 18 4.1e-05 0.0049 17.9 0.9 1 23 186 208 186 208 0.98

5 18 5.9 7e+02 1.7 0.2 3 23 279 301 277 301 0.80

6 18 0.63 75 4.8 0.6 6 23 346 363 340 364 0.90

7 18 0.19 22 6.4 0.1 2 22 391 411 390 413 0.85

8 18 0.42 50 5.3 0.3 3 23 454 474 452 474 0.95

9 18 0.0015 0.18 13.0 0.2 3 23 488 508 486 508 0.96

10 18 0.009 1.1 10.6 0.1 1 23 548 571 548 571 0.95

11 18 1.4 1.6e+02 3.7 0.1 9 23 608 623 606 623 0.91

12 18 0.03 3.6 8.9 4.7 2 23 667 688 666 688 0.97

13 18 0.003 0.35 12.1 0.1 1 23 693 716 693 716 0.95

14 18 0.16 19 6.6 0.4 3 23 813 835 812 835 0.94

15 18 0.0066 0.79 11.0 1.9 2 23 859 880 859 881 0.94

16 18 0.22 26 6.2 0.1 1 13 891 903 891 914 0.78

17 18 2.6 3.2e+02 2.8 0.2 2 23 922 943 921 943 0.96

18 18 0.0043 0.52 11.6 0.2 1 23 1230 1253 1230 1253 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.2e-06	0.00014	22.7	1.1	1	23	102	124	102	124	0.98
2	18	0.54	64	5.0	3.9	1	23	130	152	130	152	0.97
3	18	8.7e-07	0.0001	23.2	2.3	1	23	158	180	158	180	0.99
4	18	4.1e-05	0.0049	17.9	0.9	1	23	186	208	186	208	0.98
5	18	5.9	7e+02	1.7	0.2	3	23	279	301	277	301	0.80
6	18	0.63	75	4.8	0.6	6	23	346	363	340	364	0.90
7	18	0.19	22	6.4	0.1	2	22	391	411	390	413	0.85
8	18	0.42	50	5.3	0.3	3	23	454	474	452	474	0.95
9	18	0.0015	0.18	13.0	0.2	3	23	488	508	486	508	0.96
10	18	0.009	1.1	10.6	0.1	1	23	548	571	548	571	0.95
11	18	1.4	1.6e+02	3.7	0.1	9	23	608	623	606	623	0.91
12	18	0.03	3.6	8.9	4.7	2	23	667	688	666	688	0.97
13	18	0.003	0.35	12.1	0.1	1	23	693	716	693	716	0.95
14	18	0.16	19	6.6	0.4	3	23	813	835	812	835	0.94
15	18	0.0066	0.79	11.0	1.9	2	23	859	880	859	881	0.94
16	18	0.22	26	6.2	0.1	1	13	891	903	891	914	0.78
17	18	2.6	3.2e+02	2.8	0.2	2	23	922	943	921	943	0.96
18	18	0.0043	0.52	11.6	0.2	1	23	1230	1253	1230	1253	0.93

Sequence Information

Coding Sequence: ATGTTATTTAAAGGAAATAGTTCAAGATTAGAATTTTTAATTGAAAAAATTCAAGCGCATAAAGAATTATCACCCTCACCACTTCCAGATGACAAGATCTTTACTTTAAGATCAAAAGAAGGACTGATGAATGGAAGTTACTCATGGCGCAGTGAAGACGATAGCCTTAATGGGCAGAGGGGTGGCGGCACACCATCTTCTTGTACGACTTCTACATCACTGAGTTTCCCCTCAGAAACAGAGACTGACGTTGATGTTAAATTAAATGGTATTGACAGCAGCAGCACCTCTGGGCTATGTCCATACCCATGTCAATTTTGTGATAAATCTTTTCCCAGCTTGAGTCAACTGAAAAAACACGAGCAGACTCATGGTGACCAAATGCCATACCGTTGTAGCTGGTGTGCTAGATTGTTTAAACATAAACGCAGTAGAGATCGTCATGTAAAATTACATACTGGTGACAGAAGATATCGTTGCACACAGTGTGAAGCTGCATTTTCACGAAGCGATCATCTAAAAATCCACATGAAAACTCACGACAACCAAAAGCCGTATCACTGCAGCGAGTGTTCTCGTGGTTATAACACAGCAGCGGCATTAACATCGCACATGCAGACTCACAAGCGTCCTCAGTCACAGCAACTAACGAATTTCCCGTCAAAAATGTCAGAAAACGAGCGAAGTTCTCTGTGGCCAAGCGAAGGCTCATCCCCTAGTGTCAGTTCGCCACTACCCTCGTCTCTCCACAAGCTACCGCCCTACTCACCAGACTCCTCGGCAAACGAATCGTCCCCCGCAGTGTCATTTCTTCGGTCATCTCTGACCCTCGCGTGTATGTATTGCACCAAAGACACCTTCACCAGCATGGAGCAGCTCCAATTGCACGTCCAAGCTGTCCACGAGCTCGCTGTGAGCACCCTCAGTCCTTCGTCCTCGCCGAACAAAATCACCGATAACAATTACAAGCGGCGTAAAAAAAAAGATTTTAATTTAAAAATAAAGGACGAATTGTTATCGTGTGTCGACAGCGCGTGTGCTATGAAATTCACAAAATTAAATCTATTAAACGAGCATATTAGAGCTCATCACAGTAATAATGATAAAGCTCCGATAAATAACTATGATAATGACACATCAGCATCAGCAACGGAATCAGCATTCACGTTATCATGCCCTTTGTGTGGGTTATCGTGCTCATCCCCTGCAGTCTATGCTGAGCACTACGTTCTCGAGCACTGCGAAAATCGGCGAGTTATCGCTGATAAATCGCCAGAAAAAACTAATTACGGTAAAAAAATATCCAACGATAATAGCAGCAATTTAAGCGCAGGGGTTTTTTCTTCTAGCACTTTGCTCTGCGGGCAATGTGGAGCGGCGTTGAAAGACTTTGAGTCCTTTCGCGTTCACCTGGCGCATCATTTGCAAGTAAATAATTACCAGAAGCAATTCAGTGTAAATTGCCCTAAGTGCGAGCTGATTTTCACCTCCCAGGACGAGATGGTCAATCACTTGACAAAGCACTATCTGAGCGATGAAAAAATTTTAAAGCACCAGTACTGGTGTGATGCGTGCGACAGACACTATTTAGACATTGAGTCACTGAAAAAGCACACATTTGAGGAGCACACGCAGCGCTTGTACAGATGCAGTGTGTGCAGAGAGACCTTTGAGACGGCTGTTGGCATTCAGGTGCATTTAACTGTTAAGCACACACGGGAGTGCGCTGTTTATCAGTGTACGGATTGTGTAAATAATCCGGGATTCACAAAAGGGATAGAGACAGTGGGTTGTGATAAGAATAGAATGGAGAGAGACAGTGTCTTTAAAAGTTCCACAGAGCTGATGAAACACGTGATGAATGCTCATTTGTCGTGTTCCTCGTCGTTGGCATTATCATTATCGTCTGCGAAAGCTCAGGATCGGATTACTCAGATAAAGGGCCGAATCGGTCCAGCTGCACCAGAAACAACCAGAGCTTGCGGTGAATTATTTTTACGATGCTGTTTTTGTGGTGTACATTGTAATACGGAAGCTGATTTACAGCGACACTTGGCAACCCACTCGACGTGCCTTTATAGATGCCCGATTTGTCGTCAAGGTTTTACTGTTGAATTTTTGCTGGACAAGCACATTGCTCAGATACATAACAATAACTCACCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATCGATTGTCAGAATGTTTTTAATCATTCTAAACTACATGATGAGGTGAGACATAAAAGAAAGCAGTTGACACCTGAATTATGTCAACAAAATCCTTCAGAATATAAACGATTAACAATAAACCGTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTAAAGATAAATAATTGTGAATATTGTGATCGAAAGGATTTTACAAGTGAATTAGAGCTTCGCGCCCATAAAAAGCTGGCTCACAAATTATCAATCGAATCAGTAGGAAATAATCTCCAGCAGCAACCAAAATCATTATCGCAAAATCTAGAAAGTTGTAGTTATTGCGGTGAATTACTGCATTCACGCAGCGAATTGGAAGCTCACACAAGGATCCACCACTCGACGAATGAATTAGGAAAGCGCCGATACAAATGTAACATATGCGATGAATTATTTTCCACAGGGGGTATTTTGGCAGAGCACAAATTAGACAAGCACTGCAAAATAAAGTTGAGCGATGTTTGCACCGTCTGCAGAGTTGTTTTACACAGCGAAGTAGATTTTATCGAGCACGTACAGAAACACAGTTTCGAAGCGATTGATTCGTACCAACAAAGACACGAAACCATGGCATCAGCTCCCGTTTCAGCAACTACTCAAACAATTTCTGTTACAAATACTGCTACAAATACTGCTCTTATCTCTAATAACTCTAATGCTAGTATTACAGCAGCAAGTACTCATGCGCCCGTTTATTGTGTTGTCTGCAGGCAGACTCTCATTAGCGAATTCGAATGTCAATTACACGCCAGGTATCATTTACGACCCCAGTCTTCTGTTTCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATTTGCTTACGCGAATTTGATAATAATAATTCTGTTATTCCTTTGTCAAACAACGTTACAAGTAATGAAAGACAATTGAATGTTTGTAACAGGTGTTATGTACGTCATTTAAATGGTTTACCTATTTTAGGTAATAATTTTTATAATGATAATGATTGTAAAGTGAGTGAAAGTTTCGAGCGAAGAAATGTTGAAAATAATTGTAAATTAAAATCCATTAAATTAGAGTGTGTGAATGAGAAAGATGATAATTGTAATGATGAGGAAGATATTGATGTTGATGTTGATATTGATGTTAATAATGAGGAAGAAGAGGAAAAAGATAAAGGAAATGGAGAAGATAATGAAAATGAGAATAAGCATGAAAAAGAAGACGATAGTATTTATAATGAAAATAAGAATAAGGAAAATAAAATAGGAGTGAGATTTGAAAATAATTCACATGAGAAAAATAGCGCTGGCGTCCGTCCATATAACTGTCCTCAATGTAACCTCGAGTTTGCTCTTAAAGTTGAATTGGAGCATCACCTTACTGCTGTACATATGAATAAAAATATGTCTTGTATGGTTAATGCTACAGAGGGGAGGAAAAACAATTCCCGAAAAGAGGAAGAAGGGCATTCACGTGATGCTAATATTAAAGACAATGCCAGTGAAGATGGGCTGATTGTCAAAGAAGAAATTTTTGATACCGAGGTTGAAGAAGAAAATTGTGAAGAAAGAATAATGATTAATTGA
Protein Sequence: MLFKGNSSRLEFLIEKIQAHKELSPSPLPDDKIFTLRSKEGLMNGSYSWRSEDDSLNGQRGGGTPSSCTTSTSLSFPSETETDVDVKLNGIDSSSTSGLCPYPCQFCDKSFPSLSQLKKHEQTHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTQCEAAFSRSDHLKIHMKTHDNQKPYHCSECSRGYNTAAALTSHMQTHKRPQSQQLTNFPSKMSENERSSLWPSEGSSPSVSSPLPSSLHKLPPYSPDSSANESSPAVSFLRSSLTLACMYCTKDTFTSMEQLQLHVQAVHELAVSTLSPSSSPNKITDNNYKRRKKKDFNLKIKDELLSCVDSACAMKFTKLNLLNEHIRAHHSNNDKAPINNYDNDTSASATESAFTLSCPLCGLSCSSPAVYAEHYVLEHCENRRVIADKSPEKTNYGKKISNDNSSNLSAGVFSSSTLLCGQCGAALKDFESFRVHLAHHLQVNNYQKQFSVNCPKCELIFTSQDEMVNHLTKHYLSDEKILKHQYWCDACDRHYLDIESLKKHTFEEHTQRLYRCSVCRETFETAVGIQVHLTVKHTRECAVYQCTDCVNNPGFTKGIETVGCDKNRMERDSVFKSSTELMKHVMNAHLSCSSSLALSLSSAKAQDRITQIKGRIGPAAPETTRACGELFLRCCFCGVHCNTEADLQRHLATHSTCLYRCPICRQGFTVEFLLDKHIAQIHNNNSPXXXXXXXXXXXXXXXXXXXXMIDCQNVFNHSKLHDEVRHKRKQLTPELCQQNPSEYKRLTINRPXXXXXXXXXXXXXXXXXXXXXKLKINNCEYCDRKDFTSELELRAHKKLAHKLSIESVGNNLQQQPKSLSQNLESCSYCGELLHSRSELEAHTRIHHSTNELGKRRYKCNICDELFSTGGILAEHKLDKHCKIKLSDVCTVCRVVLHSEVDFIEHVQKHSFEAIDSYQQRHETMASAPVSATTQTISVTNTATNTALISNNSNASITAASTHAPVYCVVCRQTLISEFECQLHARYHLRPQSSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCICLREFDNNNSVIPLSNNVTSNERQLNVCNRCYVRHLNGLPILGNNFYNDNDCKVSESFERRNVENNCKLKSIKLECVNEKDDNCNDEEDIDVDVDIDVNNEEEEEKDKGNGEDNENENKHEKEDDSIYNENKNKENKIGVRFENNSHEKNSAGVRPYNCPQCNLEFALKVELEHHLTAVHMNKNMSCMVNATEGRKNNSRKEEEGHSRDANIKDNASEDGLIVKEEIFDTEVEEENCEERIMIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00382125;
90% Identity: -
80% Identity: -