Basic Information

Insect: Cotesia congregata
Gene Symbol: -
Assembly: None
Location: contig:851757-853034[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.1e-05 0.0013 19.8 1.3 1 23 76 98 76 98 0.97

2 9 2.1e-06 0.00025 22.0 4.1 1 23 104 126 104 126 0.99

3 9 0.027 3.3 9.0 1.1 1 23 133 156 133 156 0.95

4 9 1.4e-07 1.6e-05 25.7 2.3 1 23 162 184 162 184 0.98

5 9 0.48 58 5.1 3.1 2 23 190 212 189 212 0.84

6 9 2.5e-06 0.0003 21.8 2.2 1 23 219 241 219 241 0.98

7 9 7e-06 0.00083 20.4 0.4 1 23 245 267 245 267 0.99

8 9 0.0036 0.42 11.8 3.4 3 23 275 295 273 295 0.97

9 9 4e-06 0.00048 21.1 0.6 1 23 301 323 301 323 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.1e-05	0.0013	19.8	1.3	1	23	76	98	76	98	0.97
2	9	2.1e-06	0.00025	22.0	4.1	1	23	104	126	104	126	0.99
3	9	0.027	3.3	9.0	1.1	1	23	133	156	133	156	0.95
4	9	1.4e-07	1.6e-05	25.7	2.3	1	23	162	184	162	184	0.98
5	9	0.48	58	5.1	3.1	2	23	190	212	189	212	0.84
6	9	2.5e-06	0.0003	21.8	2.2	1	23	219	241	219	241	0.98
7	9	7e-06	0.00083	20.4	0.4	1	23	245	267	245	267	0.99
8	9	0.0036	0.42	11.8	3.4	3	23	275	295	273	295	0.97
9	9	4e-06	0.00048	21.1	0.6	1	23	301	323	301	323	0.98

Sequence Information

Coding Sequence: ATGATACTGAAGTCAAAGGAGGTAAATTTGTCAGTAAAAGAAGAAATTAACTCAGCAAATTCAGTAAATTTATTCTCCAAAAAAAAAAAAGAGATAATTAATGACAATCCGATTAAATCTTGCGGAAGTAAAAAAAAATTAGGATCCATTAACAGTATTACAAAGATCAAAGTCCCAACGGGAATAAAAAGCAAAAAATCATCTAAAGAAGAAGAAATAAAAAGATTCTTCTGTGAAATTTGCCCGCTGACTTTCAATTTAAAGAGCAAGCTTCGCTCGCACATGTTGAAGCACAGTATCTCGCGACCTTACAAGTGCAAAACTTGTTATAAGAGCTTTAAAAGCACGGTGTACTTAAACAAACACATGGAGACCCACCGGGAACCGGCAGAATATTTTTCCTGCGGTTTGTGCGACTTCAAGGCGAAAACAAAGCCCTATTTGAAGGTCCACTTTATCCGCAAGCACACTGATGACTACAATTACGAGTGCCCGCACTGCGGAAAGAAGTTCAAAGTGCAATCGGACTTTACGACTCATATAAAGGACCACGACACCGAGGCTTGTGTCTGCGACATCTGCGGGAGCTTTTATTCCAAAAGAAGCTCGCTTTACTTTCACACTCTCTACAAGCACAAATTAAAAGTTAAGGAGTACGAGTGTGTGACTTGTAAAAAGAAATTCAAGAGCCAAAAGAACCTCAATGCTCACAGAGAGTCCCACAAGGTGAAATATGTGTGCGAGAAGTGCGGAGTTGAGTTTAAATTCAAGCAGGGACTTGCAAACCATCTCAGGAGACACTCTGGTGAAAAATCTTGCCTCTGTCCGGTCTGTGGGAAAACTTTCAGCTGCTTGTCCTCCCAGAGAGTTCATTTACTCACACACGCTGGGGAGAGACCTTATGTGTGCGATATTTGTGGTCAGAGCTTTACTCAGAGATCACCTATGATGCTTCATCGGAAAAAACACCCTGGAGTACATCCTACTCCCCCGCCGATTAAAATTACTGAACTGCTGCATGGGGTTAGGGATAAAAGTCATGATAATTAA
Protein Sequence: MILKSKEVNLSVKEEINSANSVNLFSKKKKEIINDNPIKSCGSKKKLGSINSITKIKVPTGIKSKKSSKEEEIKRFFCEICPLTFNLKSKLRSHMLKHSISRPYKCKTCYKSFKSTVYLNKHMETHREPAEYFSCGLCDFKAKTKPYLKVHFIRKHTDDYNYECPHCGKKFKVQSDFTTHIKDHDTEACVCDICGSFYSKRSSLYFHTLYKHKLKVKEYECVTCKKKFKSQKNLNAHRESHKVKYVCEKCGVEFKFKQGLANHLRRHSGEKSCLCPVCGKTFSCLSSQRVHLLTHAGERPYVCDICGQSFTQRSPMMLHRKKHPGVHPTPPPIKITELLHGVRDKSHDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00381321;
90% Identity: iTF_00381321;
80% Identity: -