Basic Information

Insect: Cotesia congregata
Gene Symbol: -
Assembly: None
Location: contig:8478317-8479878[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00013 0.015 16.4 1.1 1 23 92 114 92 114 0.97

2 8 7.8e-05 0.0092 17.1 0.5 1 23 119 141 119 141 0.97

3 8 5e-06 0.00059 20.8 0.9 3 23 149 169 147 169 0.98

4 8 1.1e-06 0.00013 22.9 0.8 1 23 175 197 175 197 0.99

5 8 2.6e-05 0.0031 18.6 0.4 1 23 203 225 203 225 0.98

6 8 2.3e-05 0.0028 18.7 1.5 1 23 231 253 231 253 0.97

7 8 0.00051 0.061 14.5 3.2 3 23 261 281 259 281 0.98

8 8 1.4e-05 0.0017 19.4 1.2 1 23 287 309 287 309 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00013	0.015	16.4	1.1	1	23	92	114	92	114	0.97
2	8	7.8e-05	0.0092	17.1	0.5	1	23	119	141	119	141	0.97
3	8	5e-06	0.00059	20.8	0.9	3	23	149	169	147	169	0.98
4	8	1.1e-06	0.00013	22.9	0.8	1	23	175	197	175	197	0.99
5	8	2.6e-05	0.0031	18.6	0.4	1	23	203	225	203	225	0.98
6	8	2.3e-05	0.0028	18.7	1.5	1	23	231	253	231	253	0.97
7	8	0.00051	0.061	14.5	3.2	3	23	261	281	259	281	0.98
8	8	1.4e-05	0.0017	19.4	1.2	1	23	287	309	287	309	0.98

Sequence Information

Coding Sequence: ATGAGTGACACCACTTTGCCATTCGAACTAGTAATTTGCAAATCTGAAATTGATGATGAGCATGAAAATGAAAACCCGGTGGTGGATGATGACAACCGTCAAGACTCCCTAGCCGAGCTGCCAATTGATATCGAAGAAATAAAAATAGAGGAGCCAGATTTTTCACCAATTTCCAAAAAAAAGCCTCCCAAGCGTAAAGTAAAAGCAGAGTTGAAGTCTAAAATACGTCGAAAAGTTTCCCGAAGGAAGCCGAAGGCCGAGAATGAGCGACCTTACGCTTGTTCCTCTTGTTCCAGCTCGTTCCGGGAAAAGTGGAGCCTGAACCGGCACATTAAGAGCCACGAAGCTAAAACATTTATCTGCGACCTATGTGCCGCAAAGTTTGGACGGAAGAGCCACCTAGAAGGCCACATGAAAATCCACACTGGCGAGAAGCCGTACGGCTGCACAGTTTGTCCGGAGAAGTTCCGCAAGAGGACGACCTTGAACCAGCACATGAGGATCCACACTGGAGAGAAGCCCTTTCAGTGCGACGTTTGTTCCACGCGGTTCCGGCAAAAGGGCCAGGTGACAGTCCACATGCGGATCCACACCGGAGAAAAGCCCTACACTTGCAGTGTCTGTTCCGCCAAGTTCCGGGAACGGGGAACTCTGACCAGCCACATGCTTGTTCACACTGGGGAAAAACCGTACGCTTGTCAGATGTGTCCGATGAAGTTCCGGGAGAAGAATCACTTAAAGTCGCACATTCTTATCCACACTGGAGAAAAGCCGTACGGCTGCAATATCTGCTCTTCTAAATTCAGACAAAAGTGCACGCTTGTCAAACACCTGAGGATCCACAAAGGAGGAAAGCTTCACACTTGTTCTGTCTGTTCGACTATTTTTCCTAAAAAAGCTACGCTTGCTAAACACATGCTCACTCACACTCCCGATGAACTTTTGATGTTTGAGATGTAA
Protein Sequence: MSDTTLPFELVICKSEIDDEHENENPVVDDDNRQDSLAELPIDIEEIKIEEPDFSPISKKKPPKRKVKAELKSKIRRKVSRRKPKAENERPYACSSCSSSFREKWSLNRHIKSHEAKTFICDLCAAKFGRKSHLEGHMKIHTGEKPYGCTVCPEKFRKRTTLNQHMRIHTGEKPFQCDVCSTRFRQKGQVTVHMRIHTGEKPYTCSVCSAKFRERGTLTSHMLVHTGEKPYACQMCPMKFREKNHLKSHILIHTGEKPYGCNICSSKFRQKCTLVKHLRIHKGGKLHTCSVCSTIFPKKATLAKHMLTHTPDELLMFEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00380573;
90% Identity: iTF_00380573;
80% Identity: -