Basic Information

Insect: Cotesia congregata
Gene Symbol: -
Assembly: None
Location: contig:12710454-12712677[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.3e-05 0.0052 17.9 1.0 1 23 261 283 261 283 0.96

2 15 0.0032 0.38 12.0 7.7 1 23 290 312 290 312 0.98

3 15 0.29 34 5.8 0.4 1 21 318 338 318 339 0.87

4 15 0.0015 0.18 13.0 2.4 1 23 348 370 348 370 0.98

5 15 4e-05 0.0048 18.0 0.7 1 23 376 398 376 398 0.98

6 15 0.0029 0.35 12.1 4.2 1 23 404 426 404 426 0.98

7 15 2.6e-05 0.0031 18.5 0.9 1 23 432 454 432 454 0.98

8 15 9.9e-06 0.0012 19.9 0.5 2 23 460 481 460 481 0.97

9 15 1.9e-05 0.0023 19.0 2.9 1 23 487 509 487 509 0.98

10 15 6.4e-05 0.0076 17.3 3.7 1 23 515 537 515 537 0.99

11 15 0.028 3.3 9.0 7.3 1 23 543 565 543 565 0.97

12 15 4.1 4.9e+02 2.2 2.5 1 10 571 580 571 580 0.95

13 15 3.4e-05 0.004 18.2 4.1 1 23 630 652 630 652 0.98

14 15 8.4 1e+03 1.2 0.5 1 23 658 680 658 680 0.81

15 15 0.00037 0.045 14.9 1.8 1 23 686 709 686 709 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.3e-05	0.0052	17.9	1.0	1	23	261	283	261	283	0.96
2	15	0.0032	0.38	12.0	7.7	1	23	290	312	290	312	0.98
3	15	0.29	34	5.8	0.4	1	21	318	338	318	339	0.87
4	15	0.0015	0.18	13.0	2.4	1	23	348	370	348	370	0.98
5	15	4e-05	0.0048	18.0	0.7	1	23	376	398	376	398	0.98
6	15	0.0029	0.35	12.1	4.2	1	23	404	426	404	426	0.98
7	15	2.6e-05	0.0031	18.5	0.9	1	23	432	454	432	454	0.98
8	15	9.9e-06	0.0012	19.9	0.5	2	23	460	481	460	481	0.97
9	15	1.9e-05	0.0023	19.0	2.9	1	23	487	509	487	509	0.98
10	15	6.4e-05	0.0076	17.3	3.7	1	23	515	537	515	537	0.99
11	15	0.028	3.3	9.0	7.3	1	23	543	565	543	565	0.97
12	15	4.1	4.9e+02	2.2	2.5	1	10	571	580	571	580	0.95
13	15	3.4e-05	0.004	18.2	4.1	1	23	630	652	630	652	0.98
14	15	8.4	1e+03	1.2	0.5	1	23	658	680	658	680	0.81
15	15	0.00037	0.045	14.9	1.8	1	23	686	709	686	709	0.97

Sequence Information

Coding Sequence: ATGTTCACATTAGTTGATGATATGATGAAATATCCTTGTGATGGAATAGAAAACGTTATTAAAATATCCAATTTCAATAATAATGGAATCAATATGAACTACGATTACACGGAGCATATAAACAGTGCAACAGATACTCAGTTCCAACCACCATCAAATACCGAACCGACATTAACAGAAAATATTAATTATATCTCAACATCATATGAACTTTTGGGTTCACAAAATGACGCTTATCTCAACTCATATCAAACTCAACCGGTCCAAAATTTAATATCTATAGAACAAAATGAACAAAATATCATACCTATTATTCCTGAGTTTTCTTATCCAAATGTAAATCTTATGCCGACTATTCCGATCAACGATTATGCACTGGTTCCTTGTTATTATTTGGTGGTACCTGAAGATGGTCTTGTTGCGCCACCCATTATCCCAGTGAACACTATTCCAGAACAAGTTCCAGTAAGATTTGAAGACCGCAGTAACTTTGTGATGGTAAACGTAGACAATGAGTTGGAAAAAACCAATGGTAATTTTATTTATCTTAATAATGTAGTCGCTTCAAATGCCCAGAATTTGTTAAGTCAAGAAAATGAAGTAATTGATACTTGCCAGACTTCTGTCGCTGATTTTCCAAGTTGTGAATTGCCAACAGACTCAGTAGACAAATCAGTATCTTTAGAATCTTCATTAAACATAGAAGACCAGGAGACACCTGATGCTTTTATTTCTTCTCATCCTGAATCTGGAAGTCAATCCCAGGCAACAGAAAAATCCCATCCATGTAAAATTTGTAAAAGAAAATTCAACAGTTTAAATCAATTAGAAATTCATATGGGAATTCACGACGTTGGAGATAAATTATTTAATTGCTCTGTATGCCACGTCAATTTCCATCAGTTTCATCTTTTAAAACGGCACATGCGGATTCACAAAAGCACCGAAACATTTACATGTGAAATTTGTTCAACAAAGTTTGAGTGGGCTGAGTTTTTGGAACAACACAAAAAGCGTTGTAATGATGCTAAAAAGCCATATCATGTGTGCAGTGTTTGCCAAATGAAACTCAGCAGTCTTTTGAAACTAAAACAGCACATGCGTACTCATAAGGAGAAGCAGACACATGAATGCAGCGTTTGTAAGAAGAAATTCATCTGGCCGTCACTACTAAACGTTCATATGCGTATCCACACCGGTGATAAAAGATATGAGTGCGATATTTGCCATGTGAAGTTTACTGCGGCTTGTAACATGAAGAAGCACAAGCTTACGCATACAGGCGAGAAACCCTTTCAGTGTGACATTTGTCAGGCAAAATTTACTCGATCAATTAGTCTCACTCAGCATAAAGCAACCCATACAAGCAGAACTGAAGAGTGTGAGATTTGTAAGTCGAAATTTAGAGGACCCTGGAATCTAAAGCGACACATGCGGATTCATACTGACGAAAAACCTTTCAAGTGCGATGAATGCCAATCGACATTCTCTCAAAAATTCTACTTATCCAAACACATCCGTCTCCATTACAACAAAAAAACTTACGAGTGTGATTATTGTAAGATGAAATTATCTCAAAAATATTGCTTGATTCGTCACATGAAGATTCACGCCGGTAGTAGCGCGTACAAATGCGATGAGTGCCACAAAAAATTCCATTCCATACGAGGTTTAAGTCATCACAAAAGCGTCCATACCGGAGAAGTCCCATTTGAATGTGATGTCTGTAAGAAAAAGTTTTTGAAGTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGGTCCACAAAATAAGACATCATGAATCTCAACCGTCTCAAGATTTTAAATGTAAATTTTGTGATGAATCTTTCAAGAGTAGTTACTTCTTGAAGCTTCACCTTAAAAATCATAAGAATGAAAAATATTTTTACTGTAACATTTGCTTGTATAAGACAAGATGGCCTATTTCAATTAAAGTTCATACTCAAAATCACTCAAAACCAGGGTTGTATATTTGTTACGAGTGTGGAAGATCATCTAAAAGAAAAATTTTGTTACTACAGCACAGGAAGAAGTTTCATAGTTCTTAA
Protein Sequence: MFTLVDDMMKYPCDGIENVIKISNFNNNGINMNYDYTEHINSATDTQFQPPSNTEPTLTENINYISTSYELLGSQNDAYLNSYQTQPVQNLISIEQNEQNIIPIIPEFSYPNVNLMPTIPINDYALVPCYYLVVPEDGLVAPPIIPVNTIPEQVPVRFEDRSNFVMVNVDNELEKTNGNFIYLNNVVASNAQNLLSQENEVIDTCQTSVADFPSCELPTDSVDKSVSLESSLNIEDQETPDAFISSHPESGSQSQATEKSHPCKICKRKFNSLNQLEIHMGIHDVGDKLFNCSVCHVNFHQFHLLKRHMRIHKSTETFTCEICSTKFEWAEFLEQHKKRCNDAKKPYHVCSVCQMKLSSLLKLKQHMRTHKEKQTHECSVCKKKFIWPSLLNVHMRIHTGDKRYECDICHVKFTAACNMKKHKLTHTGEKPFQCDICQAKFTRSISLTQHKATHTSRTEECEICKSKFRGPWNLKRHMRIHTDEKPFKCDECQSTFSQKFYLSKHIRLHYNKKTYECDYCKMKLSQKYCLIRHMKIHAGSSAYKCDECHKKFHSIRGLSHHKSVHTGEVPFECDVCKKKFLKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVHKIRHHESQPSQDFKCKFCDESFKSSYFLKLHLKNHKNEKYFYCNICLYKTRWPISIKVHTQNHSKPGLYICYECGRSSKRKILLLQHRKKFHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -