Basic Information

Insect: Cotesia congregata
Gene Symbol: salm
Assembly: None
Location: contig:3841364-3853219[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 5.5e-06 0.00065 20.7 0.9 1 23 426 448 426 448 0.98

2 9 1.1e-05 0.0013 19.8 2.1 1 23 454 476 454 476 0.98

3 9 0.068 8.1 7.8 3.8 2 23 915 936 914 936 0.98

4 9 4.7e-08 5.6e-06 27.2 0.6 1 23 942 964 942 964 0.97

5 9 6.6e-05 0.0078 17.3 2.6 1 23 974 996 974 996 0.98

6 9 0.0023 0.27 12.4 1.9 2 23 1372 1393 1371 1393 0.97

7 9 2.7e-07 3.2e-05 24.8 1.4 1 23 1399 1421 1399 1421 0.99

8 9 1.1e-06 0.00013 22.9 2.1 3 23 1515 1535 1513 1535 0.96

9 9 2.2e-07 2.6e-05 25.1 0.9 1 23 1541 1563 1541 1563 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	5.5e-06	0.00065	20.7	0.9	1	23	426	448	426	448	0.98
2	9	1.1e-05	0.0013	19.8	2.1	1	23	454	476	454	476	0.98
3	9	0.068	8.1	7.8	3.8	2	23	915	936	914	936	0.98
4	9	4.7e-08	5.6e-06	27.2	0.6	1	23	942	964	942	964	0.97
5	9	6.6e-05	0.0078	17.3	2.6	1	23	974	996	974	996	0.98
6	9	0.0023	0.27	12.4	1.9	2	23	1372	1393	1371	1393	0.97
7	9	2.7e-07	3.2e-05	24.8	1.4	1	23	1399	1421	1399	1421	0.99
8	9	1.1e-06	0.00013	22.9	2.1	3	23	1515	1535	1513	1535	0.96
9	9	2.2e-07	2.6e-05	25.1	0.9	1	23	1541	1563	1541	1563	0.98

Sequence Information

Coding Sequence: ATGCAACTTATGAGATGGAGCATAACGAGAGGCTTAGAGAATCGAAATATCAAGCGACGGGATTCGAAAAACTGGCAGCAAGATAGTAATGGGATTAATCAATCGCGATTACCTTCTCCACGATATTCTGAGGACGACAATGAAACGGGATCAGAGGGTGAAGATAGCAGTGGTGGAGTTAACGTAAGCGAGTCAGCTGTTGATTTAACTTCAAATCGATCTCACTTTGAGGACGAGGATGAACGTGAGCCGGATGAATTGCCGATGGAGGAGGACGATGAGGAGGTGGTGGACGAGCAAGAAGATCAGGATGAGGATGAGGAAGGTTCACGTAAGCAAATACGAAATCGTCAGGATGCTGAGAATAATAATAGTTTTATCGAAAGTGGAACAACGAGCGGGTTATTTGCAGTGCCCGCGGGTACGAGTCATGTTACCCTTGAAGCACTACAAAATACCAAAGTCGCAGTGGCACAGTTTGCAGCAACGGCACTTGCCGGTGGCGCGGATAGTGAAGCAGCGTTACAAGACTTAGCGTTATTGCAAAGTACGCTCTATACTCTCCAGCATCAGCAGGTGTTTCAATTGCAATTGATTAGTCAGCTACAGCAACAATTGTCGATAACACACACTGGTGGTCCAGGTCAACCGGGTGCTGTGCCAGCTGGTGTTGTACCTGGTGAATCAATTACTGAACCAAAAGAATTATCCACGCCACCGTCTCCGTCTTTGCACCACCAAAAATCATCGATATCAATCTCCAGTTTGAATTCTCCGCCATCATCTCGACCCGCAAGTCATCATCCGCCGTCATCGCCGCTCAACGTACCAGTAGTATGCCATCCAGAACGTCCATCCGGTTCAACGAGTACATCGCCGATAAGTCTAACGATTCCCACAGTACCTGGGATCGTAAATTCAACGTCCACGTCCGTACCATCGTCCACCTCAGCAATCACCTGCACAACGGCTAGTAATAACTGCACGATTGGCCAGACACCGGTTTTGTCACAGCATCAAATGCCGGCACTGTGCTCAATAAGCTCGTCTCTCGCCTCGTCTATCATCACCAACAACGATCCAATGCCGCTGAATGAGCCAAATACGCTGGAGATGTTGCAAAAACGCGCCCAAGAAGTGCTGGACAACGCGAGCCAAGGTCTCCTTGCAAACAACCTGGCGGACGAACTGGCGTTTCGCAGTGGGAAAAGCGGCTCACGTTTATCACCTTACGATTCAAAATCCGGCGGCGGTAGGGGCGAACCATTCTTCAAGCACCGATGCCGGTACTGCGGCAAGGTCTTCGGCAGCGATTCAGCCCTTCAGATCCACATAAGGTCCCACACAGGTGAGCGTCCTTTTAAGTGCAACGTCTGTGGAAGCCGATTCACCACCAAGGGAAACCTCAAGGTCCACTTCCAGAGGCACACGGCCAAGTTTCCGCACGTTAAGATGAATCCAAATCCCGTGCCTGAACACCTCGACAAGTACCATCCTCCTCTGCTCCAGCAGCTCGCGGCCTCCGGTCAGAGACCCCTTCCGTCACCTCCACCACCCTCAGCGGCACCGCCTACCGCGGGCTCGGTTCCCTCACCTCATCACGCCTCGTTTCACCCAGCCTCAACTCACGGTTTTCTCCCTCCCCCACATCACCCACAACCTTCTTTACCCCTGAGTCTTGCCCTACCGGCCGCCGCAGCAGCAGCCGCAGCCGCTGCTGGTATGCCACCAACCCTTTACCACCGAGGACCAATCGTTAATCAACGCGACGATCAGGATCTACCGGAGAACCTTACGGCTTCAACGTCTACATCACCGTCTATGTTAATGCATTCACCCAAGTCGCCTGTCAACACTAATAACGCGTCAATAATAACAAACGCCATTTTTTCACAAAATTCTTCCCATCTTGCTCATCCTTGTCTTATTGATAGACAACGAGAGGAGATGAAACGTGAACAGCTGTCTCCACCTCTTCAATCCAATAGGCCTGACGATAACACAAGTCAGGGTCCTGATGATTTGACGACAGCGACGATGACCGAGACGACGATGACCCAGACGACGACGGCAACAACGACGACACCACAACCGACAATCATGCCAAAACGAGAGCCTGAAGATCCAACAGATGAAGACCAGCCGGAAGATGAAATTGATGAATTTGATCCACCTTCGCCGAGACGGTATCTGGATAGGTCATCGCCGTTGATGATGTCCAATCAAAATGTGATGGGCATGGCGCATTTACAATCCTATGAAGACTGCAGTATGGACAGCAAAATGAGCGGAAGACTAGAGCCAGATGGTGATATGGACGGTGATGAAGAGATGGAAGAACAGCCGGAAAATTTATCTGGTCGAGGTAGCAATATGTGTCATCAACAATCTGTGGGTTATCATCATCCTGGTGCGTCTCCGGCAAGTAGTACTGCCAGCAGTGGAAGTTTACAAACGTCATTTGCTGGTTTGTTGTTCCCTACAGCGCCGCCTGGTCATCATCAGCACATGCCACCGTTTATTCCAACCTCTAGTTCAATAACTCATGGTACAAATATTCCTGGTCACGAGTCAATGATCATTGATCCGTCAAAAGATCCAGCAATTTATTCAAATTTATTACCGAGGCCCGGTAGTAATGATAATTCCTGGGAGAGTCTTATTGAAATAACAAAAACATCAGAGACGTCGAAGTTGCAACAATTAGTGGATAACATTGAACACAAACTGACGGATCCAAACCAATGTGTAATTTGTCATCGAGTATTGTCATGTAAGAGTGCATTACAAATGCACTACAGAACGCACACAGGTGAACGGCCATTTAAATGTAAAATATGTGGACGGGCTTTTACAACAAAAGGGAATTTAAAAACGCATATGGGTGTACATCGTGCTAAACCGCCGCTTCGAGTACTTCATCAGTGTCCGGTTTGTCATAAAAAATTCACAAATGCACTTGTGCTCCAGCAACACATACGACTGCACACGGGTGAACCAACAGACTTAAGCCCTGAGCAAATTCAAGCCGCAGAGGTTAATGACTTCCCACCGGGTTATCCTCCGCATCCACTGGCATCATTTCTACCACAAGGTTTCCCAGGACTGCATCATCATCCAGCGGGCGGTGGGTTCACCCTGGGATTTCCACCAACGCGGCATCCAGCTCTCGAGCGACATTTGCACGATAACGATATGGATATAAAGGACATGAATATTTATCACGCGAAAAATTTACAATTTCACAATCCGTTCCAGCACCCACGAGGTTCGTACTTGGACGAACACTCGGAGGACATGGAGGACCAGGACGAGGATGATGAAGACCGACGTGATGACGACGAAAGATCCGAAGATTTGCGAGAACGGATGAATCGGCGTCCCTCGACGACCGACATCGAGGACGATAACGACGTTAATGAGAGAGATGAGACTAAAGAATCACCGTCAATGATAATGCCACCGTGTTTTTCTACCTCGCTAGCGGCATTGGAAAATCAAGTACGTACAATAACAACAGTAGCTACTGGCGGATTAGCAATGCCGGGTGGATTAGCAACACCAGGTTCAACGTCACCACTAGACCGTTACCATTGCAGTGAAAAAAGCACCAGCCCATCAAGCTCAATAGCCGGTGGACCACTTGATTTAACTCCTCGCGCCTCATCCACCCCTGGCTCCGTGGTATCCACATCAACACCACCACCACCACTACCAACACCATTATCACTACCACCACCACCACCAACGTTGCAACATCATCCGCATCCTTTCGGAATGTTTGCAGGCCTATTGCAGGCAGTAACATCCTCACCTTCGTCTTCGGTTCAGGTGAACAACACCACCACCACTACCACCACCGTCAACAGCAGTACCAACTTAAATATTGTCAACACCAATAGCAACAGCAATAGCAACAGCATTCAAACAACGACTTCTGGCGTTACTATTAACAACGTATCGACGTCAATAAAGGCTGTTAGTCCATCTGGTAATAGTAGTACTGGTGGAGGAGCACTTGCATCGTTAACAACATCCGCTGTACTCGCTGCATCCTCGACCTACAATCCGCTCGGCCTCGCTGTTGGAGGGCCAGCAGTACGTGGCAACACAACGTGTAATATCTGCTACAAAACGTTTGCGTGTAACTCCGCACTGGAGATACACTATCGGAGTCACACGAAGGAGCGCCCGTTCAAATGCACCATTTGCGACCGTGGCTTCTCGACAAAGGGCAACATGAAGCAACACATGCTTACACACAAAATAAGAGACATGCCTGCGCATTTGTTCACCGATGGCAAACCGCCTGGATCTCAGCCTCCGTCGCAGCATCTCTTGCAAGACCAGGAAAACTCACAAAGTTCGTTGATAAACGACGACTCGAGTCTTCCTCCACCACCACCACCACCACCTCCACCTCCACCGCCACCGATCCCGCCGCCGATGCCGCCAGTCGAGTCGATGCCTCCCATAAAACGGTCACCTCCTGAGGGTGACCTTCCCGCGCCAAAGAGACCTAGCATGTCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCGTCATCCTCGGCGCTGCAAATCCATATGAGAACGCATACTGGTGACAAGCCCTTCCGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAATCTTAAGGTTCACATGGGGACACATATGTGGACGAACGGAGCTTCACGTCGAGGTCGCAGAATGTCACTGGATCTGCCTCCGCTGCCCATCACACCCAAGGACTCGGAGTTTCTTCAGCGACGACCGGACCTCTTTTATCCATATCTACCCGCGCCCTTCCTTAATGGTGTTCAGCAAAAATTGAACGAGATATCAGTGATACAAAGTAACAACGGCCTACCAGGAACGCATCCAGTTAATGCGAGCAAATACGCAGGTCTGTTCGGAACAATGTACGGTGGCGCTCCTGGTGGATTCCCGATGGAAAAGCCGCCAATGGCGCCCAGTAACGGACCAATGGGGGACGGAAAACCCGTGATACCTTCGGGGTCAATGCTCTTCCAAACACCCTCGCCGTCTCACTCCCCAGGTACGCCGTCTTCCAACACCGGGAACCAAAATTCCGCCAGTGTACCCGCCTGGAGTGGAGAGTCTCTTCAGCATCACTTCGACCGCGAGGGTCCGTCCTCGAGATCCGAAAACGACTCAACGCCACCTGCCGCCCGAATGCCAGCATCTGCGCCCAGAGGCGAAGGACTGGCCGCGTGA
Protein Sequence: MQLMRWSITRGLENRNIKRRDSKNWQQDSNGINQSRLPSPRYSEDDNETGSEGEDSSGGVNVSESAVDLTSNRSHFEDEDEREPDELPMEEDDEEVVDEQEDQDEDEEGSRKQIRNRQDAENNNSFIESGTTSGLFAVPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHTGGPGQPGAVPAGVVPGESITEPKELSTPPSPSLHHQKSSISISSLNSPPSSRPASHHPPSSPLNVPVVCHPERPSGSTSTSPISLTIPTVPGIVNSTSTSVPSSTSAITCTTASNNCTIGQTPVLSQHQMPALCSISSSLASSIITNNDPMPLNEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKSGSRLSPYDSKSGGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQLAASGQRPLPSPPPPSAAPPTAGSVPSPHHASFHPASTHGFLPPPHHPQPSLPLSLALPAAAAAAAAAAGMPPTLYHRGPIVNQRDDQDLPENLTASTSTSPSMLMHSPKSPVNTNNASIITNAIFSQNSSHLAHPCLIDRQREEMKREQLSPPLQSNRPDDNTSQGPDDLTTATMTETTMTQTTTATTTTPQPTIMPKREPEDPTDEDQPEDEIDEFDPPSPRRYLDRSSPLMMSNQNVMGMAHLQSYEDCSMDSKMSGRLEPDGDMDGDEEMEEQPENLSGRGSNMCHQQSVGYHHPGASPASSTASSGSLQTSFAGLLFPTAPPGHHQHMPPFIPTSSSITHGTNIPGHESMIIDPSKDPAIYSNLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNDFPPGYPPHPLASFLPQGFPGLHHHPAGGGFTLGFPPTRHPALERHLHDNDMDIKDMNIYHAKNLQFHNPFQHPRGSYLDEHSEDMEDQDEDDEDRRDDDERSEDLRERMNRRPSTTDIEDDNDVNERDETKESPSMIMPPCFSTSLAALENQVRTITTVATGGLAMPGGLATPGSTSPLDRYHCSEKSTSPSSSIAGGPLDLTPRASSTPGSVVSTSTPPPPLPTPLSLPPPPPTLQHHPHPFGMFAGLLQAVTSSPSSSVQVNNTTTTTTTVNSSTNLNIVNTNSNSNSNSIQTTTSGVTINNVSTSIKAVSPSGNSSTGGGALASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKGNMKQHMLTHKIRDMPAHLFTDGKPPGSQPPSQHLLQDQENSQSSLINDDSSLPPPPPPPPPPPPPPIPPPMPPVESMPPIKRSPPEGDLPAPKRPSMSSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPGTHPVNASKYAGLFGTMYGGAPGGFPMEKPPMAPSNGPMGDGKPVIPSGSMLFQTPSPSHSPGTPSSNTGNQNSASVPAWSGESLQHHFDREGPSSRSENDSTPPAARMPASAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00381320;
90% Identity: iTF_00380569;
80% Identity: -