Ccon020565.1
Basic Information
- Insect
- Cotesia congregata
- Gene Symbol
- ttk
- Assembly
- None
- Location
- contig:17036095-17041302[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-15 1.5e-12 47.7 0.0 2 42 376 417 375 420 0.94 2 2 3 3.2e+03 -1.4 0.0 25 45 523 544 522 544 0.86
Sequence Information
- Coding Sequence
- ATGAGTATGCAGCAATTTTGTCTAAGATGGAATAATCATCAACCAAACTTCATATCAGTGTTCTCAACTTTGTTAACAAATGAAACTTTGGTTGATGTGACATTAGCTGCCGAAGGCCGGCATTTACAAGCACATAAAGTGGTATTGTCAGCCTGCAGTACATATTTTCAATCATTGTTCACTGTTAATCCATGCCAGCACCCTATTGTTATATTAAAAGATGTTAAATTTTCTGATTTAAAAATAATGGTTGATTTTATGTACTACGGTGAAGTTAATGTTTCTCAAGAGCAATTACCTTCAATTATTAAGACTGCTGAGAGTCTGAAAATAAAGGGACTCGCTGAAATGCATCCAGCAACATTAACCAAATGGCCAAGTGGAAGCAGTGACCCTAGCGGTGGAGACCGTGGTGAATCATGTTCACCAACTCCATCGCCAATGTCGCCGTCATTTCGACGCAAGAGACTGAGAAAATCGTCAACTGGTTCGGCATCTGGTTCCGGCGATAAACAAAACGAAGAAATTAGCGAAATAACACTTGTTGCCACAAATGTTGTTAAACCCGAGCCACTGATAGTGTCACAGGAGAACCGGGATAATATAAGACGTCCAGTTAATACCAGTACTGAGTCACAAGGAAGCATTGATGAAGATCAAATATCTATTATGAGTAACATGGAAAGTAGTACAGCGACAACACTCGCTCAAAGTGAAGGCTCTGTGCACGATGTAAGTCAACAATCTGGGGCAAATGCAGGCCAAAGTTCATCACTCTCGTCTCAAGCACCAGCACATCAAGGATTGCAATGGACAATCATGGAGCATACGTATCCACGTTTCGCTCTATCCTCGTGTCAAACGAATCTGTCGATTCAAGCATCATCGGCATTCACGACGCCAGAAATAACCGCGTCATCAAGCACCAGCGATCAGTACCCGGGTACCAACACCACTGGTTCTAGTTGTGCTATGAACAGCTACCCAGGATCACCACACGGATTGCAGCATACTTCATCTTCAGGCGGTTTATCACCCTCCGGTCAGTGTTCAAATAGCTGTCAGAGCCCCTGTGCCAGTCCTCAAGCGACAGTTAAACGAAAAAGGTCCACCAATCCGCAGGCTGATGAGAATTTTATTCGAGCGCTGGACGCTGTTCGCTACGGCGGGATCGGATTCTGCAAAGCCGCCAGGATGTTTGGCGTGAACAATCGAACCCTGTGGCTGGAGTACAAAAAACGTGGCTATCCAAATAATCGACCGAGTGTTAAATCAAAAGTCAAAAACGAGTCGAATTCATCGCCGCCTTCTCCTCCAGTTCCACCACCTGTTGAACCACCAAGTCCATCTTCCATGGGTCCACCGACTACTCCTCTGAGTACTCACAGCGGGCACAGCTCTCACAGTGTCCACAGTGCTCACAGTACTCACAGTCCTCACAGCGCTCACAATATTCACAATACTCATACCATGATACCCACCCACACGCCTCACGCGATGCTCGGCGGTTACGTTGACACTAGACATATTGATTACTCACTACCCAATCCATCTATGCCTATCAATTTACACGGTGTTAATTATAATGCCATGCAGGTTGAAGGAAAACGGGGTCGATTACTGTTAATGCGACAAACGAGAGTAAAAAAAGAATCTGAGCCAGGACATCCATCGCCTGACAGTGAACCCGGATCACCAAGAATAATATCGTCGCCAGCAGCTCATTCAGTTACTCCGATATTGAATCTTCCATCTTCGTCGCATCAGTGGCAAGACAATGAACCTCAATCGCCAGCGACGTCGAAACAAACTCTTCTAACAGTAACGACTTGCACGAATTTGCTAACTGTACCGCAACCATCCTACTTAGTGAAACAGCACTCTCATCCTCTTTTGCCAAGTCAGCAACAAAGTTCCTCTAGTAATTACTGGATTCAACGACAGCACTCCAATCCCGAGTATCCTGGTCGTTCTACGAGTCCTTCCGGAACTGCTGATCCGATTCCTCTTATTAAAATTGAAGAGGGACAGACTGAGTCCAGGATAACCAAAGACACTGGAAATAATTCTAGTTGTATAAGAATTATTCCTGCTGAATTACTCAGAAGTTCATCAACACCACAGCTCGGCAGTGGAAGAGAAACAAGAATAATAAGAGAAGGCGGGTCAAGCGATCAACGGTCGGGTCATTGCCCGGTTCAACGAGAAGGACCAGCATTAGGATGCAATCATTGTTGGAATACTGTTGATACTCATGGTCGTACATTAAGGCGAAAAACAAAATATCATTGTCCAGAGTGTCAAATAAATTTATGCATTGTACCGTGTTTTCAAGAATTTCATGAACGTCAGCGTGAAAATTCTAATATAAAAACATTACCAAAAACTAGCTCAATCTAA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSTLLTNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQEQLPSIIKTAESLKIKGLAEMHPATLTKWPSGSSDPSGGDRGESCSPTPSPMSPSFRRKRLRKSSTGSASGSGDKQNEEISEITLVATNVVKPEPLIVSQENRDNIRRPVNTSTESQGSIDEDQISIMSNMESSTATTLAQSEGSVHDVSQQSGANAGQSSSLSSQAPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITASSSTSDQYPGTNTTGSSCAMNSYPGSPHGLQHTSSSGGLSPSGQCSNSCQSPCASPQATVKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSVKSKVKNESNSSPPSPPVPPPVEPPSPSSMGPPTTPLSTHSGHSSHSVHSAHSTHSPHSAHNIHNTHTMIPTHTPHAMLGGYVDTRHIDYSLPNPSMPINLHGVNYNAMQVEGKRGRLLLMRQTRVKKESEPGHPSPDSEPGSPRIISSPAAHSVTPILNLPSSSHQWQDNEPQSPATSKQTLLTVTTCTNLLTVPQPSYLVKQHSHPLLPSQQQSSSSNYWIQRQHSNPEYPGRSTSPSGTADPIPLIKIEEGQTESRITKDTGNNSSCIRIIPAELLRSSSTPQLGSGRETRIIREGGSSDQRSGHCPVQREGPALGCNHCWNTVDTHGRTLRRKTKYHCPECQINLCIVPCFQEFHERQRENSNIKTLPKTSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380437;
- 90% Identity
- iTF_00380437;
- 80% Identity
- iTF_00378937;