Cchi002654.1
Basic Information
- Insect
- Cotesia chilonis
- Gene Symbol
- pnr
- Assembly
- None
- Location
- scaffold4:4232549-4236360[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5 2.6e+03 -2.2 0.1 7 15 20 28 18 31 0.78 2 3 2.7e-18 4.7e-15 54.6 3.2 1 34 114 146 114 148 0.97 3 3 4e-19 7e-16 57.2 6.2 1 35 168 201 168 202 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGAGCGGAAGTGGTGGTTACGGCGCCGGAACCGACTACCAAACCCAGGAGAAAACAACTTCATGGCAGCATGGAGTAGATAGTTACGCTCATCATGCGCTGACAGGACACACGGGTGGGTCAGCGGCAAGCATGGGCGCTCATAGTACTCACGGTCACCCACACGCGGCGCATCCTCACACCGGGCATCCGCATTCTACTCTTACGTCGCCATTTTATGCACAGAACGTCGCCATGATGTCGTCCTGGAGAGCTTACGATAGCGCTGGCTTTCAACGGGCCTCTCCTTACGATACAGCAATGGACTTTCAATTTGCCGAGGGACGTGAATGCGTTAATTGCGGTGCTATTTCCACCCCGTTATGGCGACGCGACGGCACAGGACATTATTTATGTAATGCATGTGGATTGTATCACAAGATGAATGGAATGAATAGGCCGCTAATAAAACCATCTAAACGCCTTACTGCAACGCGACGCCTTGGTCTCTGTTGTACCAATTGTGGTACACGAACAACGACCCTCTGGAGGCGCAATAACGAAGGGGAGCCTGTTTGCAACGCCTGCGGCCTCTATTTCAAGCTCCACGGGGTAAATCGGCCCTTGGCGATGCGCAAAGACGGCATTCAGACCAGGAAAAGAAAACCAAAAAAGACCTCAGACTCGACTGCTTCAAGAACTTCTACCAACGAGCACGAAACCTCTACTTCAACAACTTCATCGCCATCTAACGACCTGAAGAACAGTCAGCAACACCACCAATCCGAGTCAACAAAATCTTCATCCTCAGTACCGGCCGAGAGGCCCGTTTACCTCGGCCATACTCCATTACTGGCCACCGGCGTGATACCGACCGTGAAAACCGAGCCTCGCAGCTGCGAC
- Protein Sequence
- MFHGSGSGGYGAGTDYQTQEKTTSWQHGVDSYAHHALTGHTGGSAASMGAHSTHGHPHAAHPHTGHPHSTLTSPFYAQNVAMMSSWRAYDSAGFQRASPYDTAMDFQFAEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTSDSTASRTSTNEHETSTSTTSSPSNDLKNSQQHHQSESTKSSSSVPAERPVYLGHTPLLATGVIPTVKTEPRSCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00379995;
- 90% Identity
- -
- 80% Identity
- -