Basic Information

Insect: Cotesia chilonis
Gene Symbol: Zfat
Assembly: None
Location: scaffold12:1494499-1496168[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.019 1.4 9.1 8.4 1 23 180 202 180 202 0.97

2 7 4.1e-06 0.00032 20.7 1.2 1 23 208 230 208 230 0.98

3 7 6.8e-07 5.3e-05 23.1 1.5 1 23 236 258 236 258 0.98

4 7 0.014 1.1 9.5 1.6 1 23 265 288 265 288 0.93

5 7 2e-05 0.0015 18.5 0.9 1 23 300 322 300 322 0.98

6 7 0.014 1.1 9.5 0.1 1 23 328 350 328 350 0.97

7 7 0.00011 0.0082 16.2 0.9 1 23 354 377 354 377 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.019	1.4	9.1	8.4	1	23	180	202	180	202	0.97
2	7	4.1e-06	0.00032	20.7	1.2	1	23	208	230	208	230	0.98
3	7	6.8e-07	5.3e-05	23.1	1.5	1	23	236	258	236	258	0.98
4	7	0.014	1.1	9.5	1.6	1	23	265	288	265	288	0.93
5	7	2e-05	0.0015	18.5	0.9	1	23	300	322	300	322	0.98
6	7	0.014	1.1	9.5	0.1	1	23	328	350	328	350	0.97
7	7	0.00011	0.0082	16.2	0.9	1	23	354	377	354	377	0.96

Sequence Information

Coding Sequence: ATGAATGTCAATAATTGTTTATCAGATCAGCTGATCGTTAAAATTGAAGAGAATGTTGATGAAGATTTTAAAGTGAAAAAAGAGAATCACCGAGAATTTAATCATGACAATTTCATTGATTTTGAGGAAATTAAAATAGAAAAAAATGAAAATTTAGATGATGAATTTACTTCTGATTTGACAGAAAATTTAGAAGATAGTTTTTTTTTTATTAAAGAAGAGGTTGGAGATGCTCCAATTGTAAAGACTGAAATTTTATTCCCAATCGATGAGGAAACTTATAAAAGAACACCTGCAGAGAATTATTCTCGGACAAAAATTCTAGACGATGATGATCCTTTATCAGTTACTGAAACTAGCTTCAAATATGAAGAAAACACTGAGGATCAAGAATCATCTGGAAATACTTCTCAGCAAGGTTTTTTATTTGTCAACGTCGAGGATATTAAAAGAGATTTACGGACAAAATTTAAAGACGAGACAGACACAAGTGACCGTAACAATTATACAATAATCCAAAACGGCCTACTAAAAAGTTTTTGTTGCAACCTGTGTCCTCTAAGATGTCGATACAAGTCTCACATGGACCGACACATGATGCAACACACTGGAGAGCGTCCCTACGCTTGCACCTTGTGCCAGGCAAAATTTACCCACCGAGGGAACCTAAACGGGCATATGAGGATCCACAGCGGGGAGAAACCCTTCCGATGTGACATTTGCTCAAAGCAATTCAGCGAGAAAAGCAACATCAAGAGGCACATTAAAATCCACATGAGAGTCCCAAAACCTTATCGCTGCAAAATATGCTCCAAACGCTTTCTAGAAGTCAAGTACGTGCGGCAACACATGCAAAATCTTCACGTCCCTAAAGTAGACATTCCGAAACCTCGTGTTTACAAGTGTCTTACTTGCAAGGCCATTTTTAAACAGACCAGTGCTTTAAAGAAACACTTATTGGTCCACGCTGAAGATCAACCCTATGCTTGTGATGTTTGTTCGGTTAAATTTGAGGACGAGAATGAACGAGATAAACACATGGTCACTCACAAGCTTCGGTTTGCTTGTAATGTTTGTCCCTCGAAATTTGTTCATAGGGGGAATATGGTAAATCATATGAGACTTTATCATCCTGATTCAAAACTATAA
Protein Sequence: MNVNNCLSDQLIVKIEENVDEDFKVKKENHREFNHDNFIDFEEIKIEKNENLDDEFTSDLTENLEDSFFFIKEEVGDAPIVKTEILFPIDEETYKRTPAENYSRTKILDDDDPLSVTETSFKYEENTEDQESSGNTSQQGFLFVNVEDIKRDLRTKFKDETDTSDRNNYTIIQNGLLKSFCCNLCPLRCRYKSHMDRHMMQHTGERPYACTLCQAKFTHRGNLNGHMRIHSGEKPFRCDICSKQFSEKSNIKRHIKIHMRVPKPYRCKICSKRFLEVKYVRQHMQNLHVPKVDIPKPRVYKCLTCKAIFKQTSALKKHLLVHAEDQPYACDVCSVKFEDENERDKHMVTHKLRFACNVCPSKFVHRGNMVNHMRLYHPDSKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379869;
90% Identity: iTF_00379869;
80% Identity: -