Basic Information

Insect: Cotesia chilonis
Gene Symbol: L
Assembly: None
Location: scaffold7:684483-690963[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.4e-07 5e-05 23.2 1.1 1 23 60 82 60 82 0.98

2 18 0.28 22 5.4 3.9 1 23 88 110 88 110 0.97

3 18 4.6e-07 3.6e-05 23.6 2.3 1 23 116 138 116 138 0.99

4 18 2.2e-05 0.0017 18.4 0.9 1 23 144 166 144 166 0.98

5 18 3.1 2.4e+02 2.2 0.2 3 23 237 259 235 259 0.80

6 18 0.33 26 5.2 0.6 6 23 304 321 298 322 0.90

7 18 0.098 7.6 6.9 0.1 2 22 349 369 348 371 0.85

8 18 0.22 17 5.7 0.3 3 23 412 432 410 432 0.95

9 18 0.00079 0.061 13.5 0.2 3 23 446 466 444 466 0.96

10 18 7.4 5.8e+02 1.0 0.6 3 23 480 501 478 501 0.87

11 18 0.019 1.5 9.1 0.1 1 23 506 529 506 529 0.95

12 18 0.77 60 4.1 0.0 9 23 566 581 564 581 0.92

13 18 0.016 1.2 9.4 4.7 2 23 625 646 624 646 0.97

14 18 0.22 17 5.8 0.5 1 12 651 662 651 666 0.90

15 18 5.6e-05 0.0044 17.1 0.3 2 23 732 754 732 754 0.96

16 18 0.12 9.1 6.6 0.1 1 13 764 776 764 787 0.77

17 18 3.9 3.1e+02 1.8 0.2 2 23 795 816 794 816 0.94

18 18 0.00054 0.042 14.0 0.3 1 23 898 921 898 921 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.4e-07	5e-05	23.2	1.1	1	23	60	82	60	82	0.98
2	18	0.28	22	5.4	3.9	1	23	88	110	88	110	0.97
3	18	4.6e-07	3.6e-05	23.6	2.3	1	23	116	138	116	138	0.99
4	18	2.2e-05	0.0017	18.4	0.9	1	23	144	166	144	166	0.98
5	18	3.1	2.4e+02	2.2	0.2	3	23	237	259	235	259	0.80
6	18	0.33	26	5.2	0.6	6	23	304	321	298	322	0.90
7	18	0.098	7.6	6.9	0.1	2	22	349	369	348	371	0.85
8	18	0.22	17	5.7	0.3	3	23	412	432	410	432	0.95
9	18	0.00079	0.061	13.5	0.2	3	23	446	466	444	466	0.96
10	18	7.4	5.8e+02	1.0	0.6	3	23	480	501	478	501	0.87
11	18	0.019	1.5	9.1	0.1	1	23	506	529	506	529	0.95
12	18	0.77	60	4.1	0.0	9	23	566	581	564	581	0.92
13	18	0.016	1.2	9.4	4.7	2	23	625	646	624	646	0.97
14	18	0.22	17	5.8	0.5	1	12	651	662	651	666	0.90
15	18	5.6e-05	0.0044	17.1	0.3	2	23	732	754	732	754	0.96
16	18	0.12	9.1	6.6	0.1	1	13	764	776	764	787	0.77
17	18	3.9	3.1e+02	1.8	0.2	2	23	795	816	794	816	0.94
18	18	0.00054	0.042	14.0	0.3	1	23	898	921	898	921	0.95

Sequence Information

Coding Sequence: ATGAATGGAAGTTACTCATGGCGCAGTGAAGACGATAGCCTTAATGGGCAGAGGGGTGGCGGCACACCATCTTCTTGTACGACTTCTACATCACTGAGTTTCCCCTCAGAAACAGAGACTGACGTTGATGTTAAATTAAATGGTATTGACAGCAGCAGCACTTCTGGGCTATGCCCATACCCGTGTCAATTTTGTGATAAATCTTTTCCTAGCTTGAGTCAACTGAAAAAACACGAGCAGACTCATGGTGATCAAATGCCGTACCGTTGCAGCTGGTGTGCTAGATTGTTTAAACACAAACGCAGCAGAGATCGTCATGTAAAATTACATACCGGTGACAGAAGATATCGTTGCACACAGTGTGAAGCTGCATTTTCACGAAGCGATCATCTAAAAATTCACATGAAAACTCACGACAACCAAAAGCCGTATCACTGCAGCGAGTGTTCTCGTGGTTACAACACAGCAGCGGCATTAACATCGCACATGCAGACTCATAAGCGTCCTCAGTCACTGCAACTAACAAATTACCCCTCAAAGATGTCAGAAAACGAACGAAGTTCTCTGTGGCCAAGCAGAGGATCATCCCCAAGTGTCAGTTCACCACTACCCTCGTCTCTCCACAAGCTACCGCCCTACTCACCAGACTCCTCGGCGAACGAATCGTCCCCCGCAGTGTCATTTCTCCGGTCATCTCTGACCCTCGCGTGTATGTACTGCACCAAAGACACCTTCACGAGCATGGAGCAGCTCCAATTGCACGTCCAAGCTGTCCACGAGCTCGCTGTGAGCACCCTCAGCCCCTCATCCTCGCCTAACAAAATCACCGATAACAATTACAAGCGGCGTAAAAAAAAAGATTTTAATTTAAAAATAAAGGACGAATTGTTATCGTGTGTCGACAGCGCGTGTGCTATGAAATTCACAAAATTAAATCTATTAAACGAGCATATTAGAGCTCATCACAGTAATAATGATAAAGCTCCGATAAATAACTATGATAATGACACATCAGCATCAGCAACGGAATCAGCATTTACGTTATCATGCCCTTTGTGTGGGTTATCGTGCTCATCTCCTGCAGTCTACGCTGAGCACTACGTTCTCGAGCACTGCGAAAATCGGCGAGTTATCGCTGATAAATCGTCAGAAAAAGCTAATTACGGTAAAAAAATATCCAACGATAATAGCAGCAATTTAAGCGCGGGGGTTTTTTCTTCTAGTACGTTGCTTTGCGGGCAATGTGGAGCGGCATTAAAAGACTTTGAGTCCTTTCGCGTTCACCTGGCGCATCATTTGCAAGTAAATAATTACCAGAAGCAATTCAGTGTAAATTGCCCCAAGTGCGAGCTGATTTTCACCTCCCAGGACGAAATGGTCAATCACTTGACAAAGCACTATCTGAGCGACGAAAAAATTTTAAAGCACCAGTACTGGTGCGATGCGTGTGATAGACACTATTTAGACATTGAGTCACTGAAAAAGCACACATTTGAGGAGCACACGCAGCGCTTGTACAGATGCAGTATGTGCAGAGAGATCTTTGAGACGGCTGTTGGCATTCAGGTGCATTTAACTGTTAAGCACACACGGGAGTGCGCTGTTTATCAGTGTACGGATTGTGTAAATAATCCGGGATCCACAAAAGGGATAGAGACAGTGGGTAGTGATAAGAATGGAATAGAGAGAGACGGTGTCTTTAAAAGTTCCACTGAGCTGATGAAACACGTGATGAATGCTCATTTGTCGTGTTCCTCGTCGTTGGCATTATCATTATCGTCTGCCAAGGCTCAGGATCGGATTACTCAGATAAAGGGCAGAATCGGTCCAGCTGCACCAGAAACAACCAGAGCTTGCGGTGAATTATTTTTACGATGCTGTTTTTGTGGTGTACATTGTAATACGGAAGCTGATTTACAGCGACACTTGGCAACCCACTCGACGTGCCTTTATAGATGCCCGATTTGTCGTCAAGGTTTTACTAATGTTTTTAATCATTCTAAACTACATGATGAGGTAAGACATAAAAGAAAGCAATTGACACCTGAATTATCTCAACAAAATCCTTCAGAATATAAACGATTAACACAAAACCAGCTTCGCGCTCATAAAAAGCTAGCTCACAAATTATTAATCGAATCAGTAGGAAATAATCTCCAGCATCAACTAAAATCATTATCGCAAAATTTAGAAAGCTGTAATTATTGCGGTGAATCACTGCGTTCACGCGGCGAATTGGAAACTCACACAAGGATCTACCACTCGGCGAATGAATTAGGAAAACGCCGATACAAATGTAACATATGCGATGAATTATTTTCCACAGGGGGTATTTTGGCAGAGCACAAATTAGACAAGCACTGCAAAATAAAGTTGAGCGATGTTTGCACCGTCTGCAGAGTTATTTTACACAGCGAAGTAGATTTTATCGAGCACGTACAGAAACACAATTTCGAAGCGATTGATTCGTGCCAACAAAGACACGAAACCGTGGCATCAGCTCCCGTTTCAGCAAGTACTCAAGCAATTTCTGTTACAAATACTGCTACAAATACTACTCTTATCTCTAATAACTCTAATGCTTGTATTACAGCAGCAAATACTCATGTGCCCGTTTATTGTGTTGTCTGCAGGCAGACTCTCATTAGCGAATTCGAATGTCAATTACATGCCAGCGCTGGCGTCCGTCCATATAACTGTCCTCAATGTAACCTCAAGTTTGCTCTTAAAGTTGAATTGGAGCATCACCTTAATGCTGTACATATGAATAAAAATATGTCTTGTATGGTTAATGCTACGTCGGGGAGGAAAAATAACTCCCGAAAAGAGGAAGAAGGGCATTCACGTGATGCTAATATTAAAGACAATGCCAGTGAAGATGGGCTGATTGTCAAAGAAGAAATTTTTGATACCGAGGTTGAAGAAGGAAATTGTGAAGAAAGAATATTGATGAATTGA
Protein Sequence: MNGSYSWRSEDDSLNGQRGGGTPSSCTTSTSLSFPSETETDVDVKLNGIDSSSTSGLCPYPCQFCDKSFPSLSQLKKHEQTHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTQCEAAFSRSDHLKIHMKTHDNQKPYHCSECSRGYNTAAALTSHMQTHKRPQSLQLTNYPSKMSENERSSLWPSRGSSPSVSSPLPSSLHKLPPYSPDSSANESSPAVSFLRSSLTLACMYCTKDTFTSMEQLQLHVQAVHELAVSTLSPSSSPNKITDNNYKRRKKKDFNLKIKDELLSCVDSACAMKFTKLNLLNEHIRAHHSNNDKAPINNYDNDTSASATESAFTLSCPLCGLSCSSPAVYAEHYVLEHCENRRVIADKSSEKANYGKKISNDNSSNLSAGVFSSSTLLCGQCGAALKDFESFRVHLAHHLQVNNYQKQFSVNCPKCELIFTSQDEMVNHLTKHYLSDEKILKHQYWCDACDRHYLDIESLKKHTFEEHTQRLYRCSMCREIFETAVGIQVHLTVKHTRECAVYQCTDCVNNPGSTKGIETVGSDKNGIERDGVFKSSTELMKHVMNAHLSCSSSLALSLSSAKAQDRITQIKGRIGPAAPETTRACGELFLRCCFCGVHCNTEADLQRHLATHSTCLYRCPICRQGFTNVFNHSKLHDEVRHKRKQLTPELSQQNPSEYKRLTQNQLRAHKKLAHKLLIESVGNNLQHQLKSLSQNLESCNYCGESLRSRGELETHTRIYHSANELGKRRYKCNICDELFSTGGILAEHKLDKHCKIKLSDVCTVCRVILHSEVDFIEHVQKHNFEAIDSCQQRHETVASAPVSASTQAISVTNTATNTTLISNNSNACITAANTHVPVYCVVCRQTLISEFECQLHASAGVRPYNCPQCNLKFALKVELEHHLNAVHMNKNMSCMVNATSGRKNNSRKEEEGHSRDANIKDNASEDGLIVKEEIFDTEVEEGNCEERILMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00380592;
90% Identity: -
80% Identity: -