Basic Information

Insect: Cotesia chilonis
Gene Symbol: -
Assembly: None
Location: scaffold248:63651-67033[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.2e-06 0.00032 20.6 2.0 1 23 150 172 150 172 0.98

2 14 7.6e-06 0.00059 19.8 1.7 1 23 178 200 178 200 0.97

3 14 0.00017 0.013 15.6 0.2 1 23 321 343 321 343 0.97

4 14 0.019 1.5 9.1 0.1 1 23 349 372 349 372 0.97

5 14 0.022 1.7 8.9 0.1 1 20 396 415 396 415 0.97

6 14 0.75 59 4.1 0.4 2 23 438 460 438 460 0.95

7 14 0.003 0.23 11.6 3.0 2 19 468 485 468 489 0.95

8 14 5.8e-05 0.0045 17.0 3.2 3 23 497 517 495 517 0.97

9 14 0.011 0.83 9.9 0.1 3 23 524 544 523 544 0.97

10 14 1e-05 0.00082 19.4 0.5 1 23 553 575 553 575 0.98

11 14 0.0027 0.21 11.8 0.2 3 23 583 603 581 603 0.97

12 14 0.0024 0.18 12.0 0.2 3 23 611 631 609 632 0.94

13 14 1.1 85 3.6 0.2 1 23 646 668 646 668 0.92

14 14 0.007 0.55 10.5 0.0 1 20 1051 1070 1051 1073 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.2e-06	0.00032	20.6	2.0	1	23	150	172	150	172	0.98
2	14	7.6e-06	0.00059	19.8	1.7	1	23	178	200	178	200	0.97
3	14	0.00017	0.013	15.6	0.2	1	23	321	343	321	343	0.97
4	14	0.019	1.5	9.1	0.1	1	23	349	372	349	372	0.97
5	14	0.022	1.7	8.9	0.1	1	20	396	415	396	415	0.97
6	14	0.75	59	4.1	0.4	2	23	438	460	438	460	0.95
7	14	0.003	0.23	11.6	3.0	2	19	468	485	468	489	0.95
8	14	5.8e-05	0.0045	17.0	3.2	3	23	497	517	495	517	0.97
9	14	0.011	0.83	9.9	0.1	3	23	524	544	523	544	0.97
10	14	1e-05	0.00082	19.4	0.5	1	23	553	575	553	575	0.98
11	14	0.0027	0.21	11.8	0.2	3	23	583	603	581	603	0.97
12	14	0.0024	0.18	12.0	0.2	3	23	611	631	609	632	0.94
13	14	1.1	85	3.6	0.2	1	23	646	668	646	668	0.92
14	14	0.007	0.55	10.5	0.0	1	20	1051	1070	1051	1073	0.94

Sequence Information

Coding Sequence: ATGGAAGTCTCAGGCGATTTAACCCTTCACTGGGAAGAAGATGTTGGAAATGTTATCCATGAAGAAGTCATTTGTGATCTAGAAGATAACCTGACCGATCAAGATGGTGAGGTTATTGGAGCTTGTGAAGAAGTTTGTGTTGAAGAGACAGTTCAAACAATAATTGACTCAAATTCATCAGCTCATAATTTACCATCGGATACTGAAATATTAATGGTGCCACAATCGAATGATATAGAGTCTATTTATATTATGCCACAAGAAGATCAAGGGCACGATTATTTAAATATTCAAGTTACAGAAGAAGTCATCACTGATAACTGGGATCGCTCGGGTCCAGATGATGGAGTTGAGATTCCAGAAACAAAAGTATCACATGACAATTTATTAGAATATGATGATATGGAGATTCCGATTGAACAAGATCCTTACACCAATACACGACCTTATCCGTGTGATTTCTGTAGCCGAAGATTTCGCAAAAAAGCAAATCTTATGAATCATATGACAACACATCAAAATGATCGACCGCACAGTTGTAATCTTTGTGGTGCACGTTATGTAAGGAAATCTGATTTAATGAATCATTTGAAAACACATGCATATGCACCACCTCGTGAAGGTTCCGATGATGATTTGAATGACGAGGATTCTCTTGCTTTAGAAGATGATGATGATATTATGAAAGGTCGTCGTAAAAAGATTCAATCTTCTGTACCAAGAAAGCGAAAAAATAATGCAACTGTTATTGCAAAACATAATATGAGTCCTGATGTTTTAACTAAATTGGATAAATTTGGAAGAAAGTCTTATGACTACGTCGAAGAAGACTTGCATTTTGTAGATGATATAACAACACGGGGCGCAAATTCAAAAGCTTCGAGTTCACGTTGGACAGAGTCGTTGATTGTGACAGATTCTCAACCTCCTCGATGGCCTATTTCTGATCCTACAAAACCCTATGTTTGTCAGTACTGCGGAATGGGATTTGCTCGTGAAAAAGCTTTAGCATCACACTCCCGATTTCACGCTGGCGATAGCCCTTATGAGTGTTCCAATTGTAGTGATATGTTTTGGGATCCCAATGCACTTCGTGAGCATATGCGAGTTAAACATGGACTTCCATCGAGTGATATTGATTACGACATAAATGAAACTTACACTAATGACGAAAGATTTGGACAATTCTATTGTGATGTATGCGCTGTTGCATTTGATCGTATTGATCTATTAAAGCGCCATCAATGGTTTGAAGAGGCACTTGCACTTCTTGCACATGCTGAACTTCATGCATCAAGATCACCAAGTCGTCGATGTCTTCTTTGTGGTGCAAAATGTCGTGATGATGCTGAAGTTGCAGAACATCTACGGCAAAATCATGCTGATGACGCTCCACCAAATACATGTACACTTTGTGGTAAAACATGCAAAGATAAACGAAGCCTATTAAAACATTCTTGGGTTCACAACGTTGATAAAACATTTGGTTGTACTAAATGTGGAAAAAGTTTTCACAGCAAAGCTCGGCTTCGGCGACATATGGTATCACATCGTAATAAGATGGTAGCTTGTGATGAATGTGGTGAAGAATTTCCTGATGGGCGCGCTCTTGTTAGCCATCGTCATTCACACAATAAAGAATTGGGTGGAAGAACATTTCCATGTCGGGAATGTGGTAAAACTTTTGGTAGTCGCAGTTCTCAGCAAATTCATTTACGTATTCATACTGGTGAAAGACCGTATGGTTGTAGATTTTGTTGGAAAGCTTTTGCTGATGGTGGTACATTAAGAAAACATGAAAGAATTCACACTGGTGAAAAACCGTACGGTTGTGCAATTTGTCCTCGAGCTTTTAATCAACGTGTTGTTCTTAGAGAACATGTTCGTGCACATCATTCGGGACCTGATCCTAAATATCACGGAAGCTTAACGCCATTTTTTTGCAAAGTATGTAACAATTTATTTGGTACATCTGAAGAAATCGTTCTTCATATAGTCCAACATTGTGACGATAATACAGCACTTCGTCGGCAACCACAAGTTGGACCAAGAAAATATAAACGTAGACGTAAACTCAAGTCTCATGAATCACCTTTACCAGCTCTTACCTCACAGTCAAATGAAAATTTCAATACATTAGAGTTTGGTTCTGAATCTGATGATAATACAAAAAGAAAACTTGGGAGAAAAAATAAGCAAAATCGTTCAAGTGTTGAGGAAGGTTATCAAAATGTTTTAAAAAGTTTTGAAAGTTCTTTACAGAATATTAATTCAATTGTTAATAATTCGAAGACTTTAAGCTCAGCTAAAACAAGACTTACGAAAAAAAAATTGAAAAAAGACGAGAAAAAAGTTGGTGAAACTCAATTACAAGGTCAACCTGGTCGGCCGCGAATGATACATACTCAAAAAACAAGAGTACCTGTTGAATTAGGAACAGAAGGAGCTAAAAAAGGCCAGAAAACTAAAACTATGGTCACAAGAACTCCCAAAGTCATACCCACTGAACACAAACTTGGAATTTTCCCTGGTGGTGAAAGAAATCGCCCAAGAACGAAAAATGTCAGTTATCACAGTGATGGTAAAGTTCAAGTTACGCTTGCGACATTTCCAAAGCCAAAAGATTCATCAGATGATATTACGCCACCAGTACAATCGATTAGTCCAGAAAATATTAAAATGGAAATGCTTGCTGCACCCAATAATATAACAATTAATTATGAAAGTAATAATGGTAATCTCGAAAATGTTAACAGTAAACAAGAATCTTTATCAAAGAAAAAAGTTGTTGTCAAAGGAAGACCTGGAAGACGTTCAGTAAAACAAGTAACGATAAAACAAGAACCTCAAGATATAGAGATACATGAAGAAATCAGTAGCAAAAATAATGAAGAATACGCGCCATCCACCATCTATAATGAACCTGAAATAGATGGTAGTAATATGGAAGTAGCATTTGAAGCTAATGTCATTGCAGATGAAGAAGAACATGAAGCAATACTTCCAGACTTGGATGGTGTCAATCACGATGAAAATTTGACAAATAACGTTAAATTAAGTGTAAAAGTTGAATCGACAACACAGCATCAACATATTATGTCAAACGTCAGTGAAGATGTTCCTGAAACTATTATCCCTGATACTATTGAGTATACGTGTGAAATGTGTGCTGCTGTATTTTCAAGCCGTAATGAACTTTTAAATCACGTACCTATACACATTTGA
Protein Sequence: MEVSGDLTLHWEEDVGNVIHEEVICDLEDNLTDQDGEVIGACEEVCVEETVQTIIDSNSSAHNLPSDTEILMVPQSNDIESIYIMPQEDQGHDYLNIQVTEEVITDNWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPIEQDPYTNTRPYPCDFCSRRFRKKANLMNHMTTHQNDRPHSCNLCGARYVRKSDLMNHLKTHAYAPPREGSDDDLNDEDSLALEDDDDIMKGRRKKIQSSVPRKRKNNATVIAKHNMSPDVLTKLDKFGRKSYDYVEEDLHFVDDITTRGANSKASSSRWTESLIVTDSQPPRWPISDPTKPYVCQYCGMGFAREKALASHSRFHAGDSPYECSNCSDMFWDPNALREHMRVKHGLPSSDIDYDINETYTNDERFGQFYCDVCAVAFDRIDLLKRHQWFEEALALLAHAELHASRSPSRRCLLCGAKCRDDAEVAEHLRQNHADDAPPNTCTLCGKTCKDKRSLLKHSWVHNVDKTFGCTKCGKSFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKELGGRTFPCRECGKTFGSRSSQQIHLRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKYHGSLTPFFCKVCNNLFGTSEEIVLHIVQHCDDNTALRRQPQVGPRKYKRRRKLKSHESPLPALTSQSNENFNTLEFGSESDDNTKRKLGRKNKQNRSSVEEGYQNVLKSFESSLQNINSIVNNSKTLSSAKTRLTKKKLKKDEKKVGETQLQGQPGRPRMIHTQKTRVPVELGTEGAKKGQKTKTMVTRTPKVIPTEHKLGIFPGGERNRPRTKNVSYHSDGKVQVTLATFPKPKDSSDDITPPVQSISPENIKMEMLAAPNNITINYESNNGNLENVNSKQESLSKKKVVVKGRPGRRSVKQVTIKQEPQDIEIHEEISSKNNEEYAPSTIYNEPEIDGSNMEVAFEANVIADEEEHEAILPDLDGVNHDENLTNNVKLSVKVESTTQHQHIMSNVSEDVPETIIPDTIEYTCEMCAAVFSSRNELLNHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379089; iTF_00380553; iTF_00382066; iTF_01003735; iTF_01005474; iTF_01004529; iTF_01006491; iTF_00381343;
90% Identity: iTF_00382066;
80% Identity: -