Basic Information

Insect: Cotesia chilonis
Gene Symbol: -
Assembly: None
Location: scaffold9:3803368-3808474[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0025 0.2 11.9 2.6 1 23 339 361 339 361 0.97

2 17 0.009 0.7 10.1 0.7 2 23 397 418 396 418 0.97

3 17 5.5e-05 0.0043 17.1 0.8 2 23 519 540 518 540 0.98

4 17 0.00088 0.068 13.3 1.2 2 23 585 606 584 606 0.97

5 17 2.5e-05 0.0019 18.2 0.5 1 23 611 633 611 633 0.96

6 17 0.002 0.16 12.2 0.3 1 21 639 659 639 663 0.92

7 17 0.00013 0.01 15.9 1.0 2 23 714 735 713 735 0.95

8 17 0.0002 0.016 15.3 0.7 1 20 759 778 759 780 0.94

9 17 0.034 2.6 8.3 0.6 2 23 791 812 791 812 0.97

10 17 2e-05 0.0016 18.5 0.6 2 23 850 871 849 871 0.97

11 17 1.8e-05 0.0014 18.6 1.6 1 23 876 898 876 898 0.95

12 17 0.00029 0.022 14.8 2.4 1 23 904 926 904 926 0.98

13 17 5.6e-06 0.00044 20.2 0.4 1 23 943 965 943 965 0.95

14 17 1e-06 8.1e-05 22.5 0.3 1 23 971 993 971 993 0.99

15 17 5.8e-05 0.0045 17.0 0.4 1 23 999 1021 999 1021 0.98

16 17 0.00054 0.042 14.0 4.2 1 23 1027 1049 1027 1049 0.96

17 17 0.0075 0.59 10.4 0.4 1 20 1055 1074 1055 1076 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0025	0.2	11.9	2.6	1	23	339	361	339	361	0.97
2	17	0.009	0.7	10.1	0.7	2	23	397	418	396	418	0.97
3	17	5.5e-05	0.0043	17.1	0.8	2	23	519	540	518	540	0.98
4	17	0.00088	0.068	13.3	1.2	2	23	585	606	584	606	0.97
5	17	2.5e-05	0.0019	18.2	0.5	1	23	611	633	611	633	0.96
6	17	0.002	0.16	12.2	0.3	1	21	639	659	639	663	0.92
7	17	0.00013	0.01	15.9	1.0	2	23	714	735	713	735	0.95
8	17	0.0002	0.016	15.3	0.7	1	20	759	778	759	780	0.94
9	17	0.034	2.6	8.3	0.6	2	23	791	812	791	812	0.97
10	17	2e-05	0.0016	18.5	0.6	2	23	850	871	849	871	0.97
11	17	1.8e-05	0.0014	18.6	1.6	1	23	876	898	876	898	0.95
12	17	0.00029	0.022	14.8	2.4	1	23	904	926	904	926	0.98
13	17	5.6e-06	0.00044	20.2	0.4	1	23	943	965	943	965	0.95
14	17	1e-06	8.1e-05	22.5	0.3	1	23	971	993	971	993	0.99
15	17	5.8e-05	0.0045	17.0	0.4	1	23	999	1021	999	1021	0.98
16	17	0.00054	0.042	14.0	4.2	1	23	1027	1049	1027	1049	0.96
17	17	0.0075	0.59	10.4	0.4	1	20	1055	1074	1055	1076	0.89

Sequence Information

Coding Sequence: ATGGACGGCGTTAATATTGATGATAGCAATCAAGTGTCTCACAATGAGGATGATAATGTCGAAGCAAGTGTGGAAATTTGCCGGGTTTGTCTCCTCAGCAATCACTTGATGAGAGATTTATTCATTGAGAATGATGTTGTATCTTTATCAACTAAAGCCATGAGCTTCGCTAACGTTAAGGTTAATGATGGTCTACCAACTCACGTATGCTGTGAATGTGCAGAAAAATTAGAATCAGCATATGAATTTAAATTACAAGTTGAACAAGCGGACAGCTTGCTTCGAGAAAAATACGACAGTTTGAATATAAAGGAAGAGTTATTTTTTAATGAAGTTGAGGTACGCTTGGAGAATGAAAGACATGATGATGTGACAGGTATGGTCGGCGAGCATTATAATGTTACAAACACCGTATCTGATGATAAATCGTCATTATTAAAAGATCATTTGGCATTATTACAAGTCGAAAAACTCACCCATCAGCACGAACAATATTTAGAGGATGAAGTTATGAAAGATCAAATAATGCAATCCGAGGAGCAATACATCGAAGACGAGCACACTAATGAACAAATGATCACCGAAGCTATTGAATCATCGGCGAATGACAATATCAAGCCTGCAGCAATAATGCATGACCAAGATACTATTACTGTTGGGGAGCATAATTACATAGTTCAACATCCGGATTACACATTGTCTAGTGAGCAAGATCATGAGTTGATAAATGCCGACAATGTCAATGAACACGACGCGAATGAATATTTATCAATGATTGGCGATGAGGAGAGATTACTCAAAGAAACTGAAACCCATTTAGAGAATGTTATTGATGACAATAAAAATAATGGATATATTAACGACAACGAACACTGCAATAAAATTTCAACGTGTACTGATGAAATTGATTCTTCAGATCAAGTATTAGATGACGAAAATTATTTTGAAAATCTTGATCTGAGCAGTAGGTTATCACAAACTCAGTCAACTGATAAACTTGACAAAAAAATTTTTTTTATGTGTCACATTTGTGACGAAGAATTTTTGTCCAAGGATTTATTAAAGGAGCATTTACATTCACATGAAGAAGTTAAACAGAGATTGTTGATGAAAAAAACACCGGAAAAAGTAACGCAGAAAAATGTTTCACCGATAAAATCACAACCACCATCTGGTAAAAAGCCAAATAAATGTCCATATTGTGGTAAAGAATATTTGTACGTTATTTCATTTAAAAAACATATCAAGCAGCATCAGAAAAATGATGATGAGTTAAAAGAAGAAAATAATGACTCAATGTACCAGGATGATAACTCTGCAGATTCTAATAATTTTGATAATAACGACACTTTCGAAATACATTCAGTTCTTGATAAAGTTGAAAAAACAACAAAAATTTTCAAAATTATATTTACAGATGTTTGTAACTTGAATTATGATTTTAATTTTTATATTGGCCGTAAAAATTCAAATAAAAGTAATAATTATCTTCAAATTTTTTCAGATAATTATAATGAACTTTCAAATCATCATGGCTATCAAGTTGATAAACAAAAGTGTAACATTTGTGGGTTGGAATTTGATTCACTTGATAAATTAAAAAATCATCGTTCGACTCATGTTATTGAAGGTGTAATATCAGAACAGGATTTGAAAGATGAACTTTCCAGTATGTGTCAAAAAGAGTATGATCAAGAGAGAATAATGGATAATAATATATTGATGGAATCGAAAAAAGAAGGTAATGAACTCAAGTGCCCTACTTGCTTTTTATTATTCAGCAGTAAAAAATTATTATCAAAACATTTGGAGACACATGAGGGCGTCAGGTATCGTTGTAAAATATGTGGTGACGAATTTACTCAAAAAGACGATCTTCGTAAGCACGCTGAGCAACATTTAGAAGTAAAAACATTTCAATGTATGCAGTGTAACAAGATATTTGTTAATGAATTGACGCTGAGAAATCATTTAATAGCAACTAATCACAAGACAACAGTCCACGGTGAAGAGTATGATCCAAATAAAAGAATTAAAAGAGTAGCAGCGCGCGCGGCACAAAAAATAATTGATAAAATTAGTCTCAAGGCCGCCGATAAATTGCAGTCCAAAAAACAGAGTAGTAAAAATAAAAATCTTGAGTGTGAAACGTGCGGCAAGAGATGTATTTCTAAACAAGCTTTGGCTAAGCACATGGATTATCATATGAGAACACAAAAACCTGATACGAAAAAATCATTATTAAGACACCAACTTTTGCACGAAGAACCCAATTTTGAGTGTGATATTTGTAATGTTAAATTTTATCGTAAAGATAAGTTGAAAGCTCATTACGATAAATGTTCTGAAAAAAATCCAAATCAAGTGAGAAAGTGTAATATTTGTGGGGATACTTTTGAGAATAATGAAATATTGCGTGAACATAGATCAAAACATGTTGACGAAGGGATACTAACCGAGGAAGACTTGAAAGATTTGGAGCCAGGCTCTGAAGATAGGAAGGGTGAAAAAATAGCCCGAAAAAGACGCACTGATATCGTTGGTCTAGAGTGCACTGAATGCAATAAACAGTATACCTCACGTAAAGGTCTTTTGAGACATATACAAGTTCACGAAGGTAAAAAATATCTTTGTGATATATGTCCAAAGAAATTTTATCGTCGTGAGCATTTGAAGATTCACGTTGCTAAACATAATATGATAAAACCATACAAGTGTACACGTTGCTCGAAACGTTTTATGAAAGAGGAGCAGCTTAATGCACATTTGACTAAACACGAGAGAACTTTTAAGAAAAATAAAGAGCCAGATAGTACGTCAAAAAGATTCCTTTGTGAAATTTGTTCGAAGAGTTTTACTCAGTCAACAACTTTGGTCGCTCATTTGCGTGCTCACAATGGTATTAAACCTTATGTGTGTGAAGTATGTGCAAGACCGTTTACTACAAATGCGTATTTAAAAATGCACATGAGAACTCATACTCAAGAACGGCCGTACACGTGTCAATTTTGTTCACGTGCTTTTGCAAGAGCTGACACGCTGGCTAATCACTTGACTTCGCATACTGGCGAAGCTAAATATCATTGCAAATTTTGTCCGAAAAATTTCCGCCGACTCAAATCTTTAAAAGAACATGTGTTCATTCATACAGGACAACGGCCGTATGCATGTCCGACATGCGACCGGAGATTTAACAACAATGGAAGTCGATATGCTCACAGTAAAAGATGTAAACAAAATATGCTCCAAAATCAAGCTAGACAAAGTCAAGCGCAGACTTCCCAGACACCTCCAGCGCATCCAGTTACTCAGACAATGCAAGTTGTTCAATCGAAAAACGTTAAAACAATAACTATTGCAAGACCTGACCAAGTTGGTACTCATCAAATTCTGCAACACCAAGAAATATTAATGCCACTTATTTTACCTCTCACTGTTACACTTACTGATTGCGACGAAGAAGTTATATTACCAGAGGGCACCAAGATATTTACTACTACGTAG
Protein Sequence: MDGVNIDDSNQVSHNEDDNVEASVEICRVCLLSNHLMRDLFIENDVVSLSTKAMSFANVKVNDGLPTHVCCECAEKLESAYEFKLQVEQADSLLREKYDSLNIKEELFFNEVEVRLENERHDDVTGMVGEHYNVTNTVSDDKSSLLKDHLALLQVEKLTHQHEQYLEDEVMKDQIMQSEEQYIEDEHTNEQMITEAIESSANDNIKPAAIMHDQDTITVGEHNYIVQHPDYTLSSEQDHELINADNVNEHDANEYLSMIGDEERLLKETETHLENVIDDNKNNGYINDNEHCNKISTCTDEIDSSDQVLDDENYFENLDLSSRLSQTQSTDKLDKKIFFMCHICDEEFLSKDLLKEHLHSHEEVKQRLLMKKTPEKVTQKNVSPIKSQPPSGKKPNKCPYCGKEYLYVISFKKHIKQHQKNDDELKEENNDSMYQDDNSADSNNFDNNDTFEIHSVLDKVEKTTKIFKIIFTDVCNLNYDFNFYIGRKNSNKSNNYLQIFSDNYNELSNHHGYQVDKQKCNICGLEFDSLDKLKNHRSTHVIEGVISEQDLKDELSSMCQKEYDQERIMDNNILMESKKEGNELKCPTCFLLFSSKKLLSKHLETHEGVRYRCKICGDEFTQKDDLRKHAEQHLEVKTFQCMQCNKIFVNELTLRNHLIATNHKTTVHGEEYDPNKRIKRVAARAAQKIIDKISLKAADKLQSKKQSSKNKNLECETCGKRCISKQALAKHMDYHMRTQKPDTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPNQVRKCNICGDTFENNEILREHRSKHVDEGILTEEDLKDLEPGSEDRKGEKIARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCSKRFMKEEQLNAHLTKHERTFKKNKEPDSTSKRFLCEICSKSFTQSTTLVAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYTCQFCSRAFARADTLANHLTSHTGEAKYHCKFCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQARQSQAQTSQTPPAHPVTQTMQVVQSKNVKTITIARPDQVGTHQILQHQEILMPLILPLTVTLTDCDEEVILPEGTKIFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00382050;
90% Identity: -
80% Identity: -