Basic Information

Insect: Cotesia chilonis
Gene Symbol: -
Assembly: None
Location: scaffold12:33209-53751[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 34 0.5 39 4.7 0.9 2 15 92 105 91 108 0.85

2 34 0.0055 0.43 10.8 0.8 1 23 119 141 119 141 0.99

3 34 0.19 15 6.0 4.5 1 23 147 170 147 170 0.92

4 34 0.026 2 8.7 0.4 2 23 180 201 179 201 0.93

5 34 0.0014 0.11 12.7 1.2 1 23 207 229 207 229 0.98

6 34 4.6e-05 0.0036 17.4 0.6 1 20 235 254 235 258 0.90

7 34 0.15 12 6.3 0.3 1 15 267 281 267 284 0.90

8 34 2 1.6e+02 2.7 0.7 2 23 345 369 344 369 0.82

9 34 0.047 3.7 7.9 0.5 1 23 417 439 417 439 0.94

10 34 1.4 1.1e+02 3.2 0.4 1 15 447 461 447 464 0.92

11 34 3.2e-05 0.0025 17.8 3.0 2 23 477 498 477 498 0.98

12 34 0.094 7.3 6.9 1.1 2 23 505 526 504 526 0.96

13 34 0.0023 0.18 12.0 2.6 1 21 532 552 532 553 0.86

14 34 0.015 1.2 9.4 5.0 1 23 587 610 587 610 0.98

15 34 0.0012 0.093 12.9 1.0 1 23 616 638 616 638 0.97

16 34 0.047 3.7 7.9 1.4 1 23 644 666 644 666 0.98

17 34 0.062 4.9 7.5 2.1 1 23 671 694 671 694 0.92

18 34 0.016 1.3 9.3 2.4 2 23 704 725 704 725 0.98

19 34 0.047 3.7 7.9 0.1 1 16 761 776 761 778 0.87

20 34 6e-05 0.0047 17.0 1.0 1 23 804 826 804 826 0.96

21 34 0.014 1.1 9.5 8.0 1 23 833 855 833 855 0.98

22 34 0.4 31 5.0 0.4 1 21 861 881 861 882 0.87

23 34 0.0021 0.16 12.2 2.4 1 23 891 913 891 913 0.98

24 34 5.5e-05 0.0043 17.1 0.7 1 23 919 941 919 941 0.98

25 34 0.0041 0.32 11.2 4.2 1 23 947 969 947 969 0.98

26 34 3.7e-05 0.0029 17.7 0.9 1 23 975 997 975 997 0.98

27 34 1.4e-05 0.0011 19.0 0.5 2 23 1003 1024 1003 1024 0.97

28 34 2.6e-05 0.002 18.1 2.9 1 23 1030 1052 1030 1052 0.98

29 34 8.8e-05 0.0069 16.5 3.7 1 23 1058 1080 1058 1080 0.99

30 34 0.082 6.4 7.1 7.9 1 23 1086 1108 1086 1108 0.98

31 34 0.0022 0.17 12.1 2.3 1 23 1114 1136 1114 1136 0.97

32 34 0.048 3.7 7.9 2.0 1 23 1142 1164 1142 1165 0.95

33 34 4.7e-05 0.0037 17.3 4.1 1 23 1173 1195 1173 1195 0.98

34 34 0.00036 0.028 14.5 1.8 1 23 1229 1252 1229 1252 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	34	0.5	39	4.7	0.9	2	15	92	105	91	108	0.85
2	34	0.0055	0.43	10.8	0.8	1	23	119	141	119	141	0.99
3	34	0.19	15	6.0	4.5	1	23	147	170	147	170	0.92
4	34	0.026	2	8.7	0.4	2	23	180	201	179	201	0.93
5	34	0.0014	0.11	12.7	1.2	1	23	207	229	207	229	0.98
6	34	4.6e-05	0.0036	17.4	0.6	1	20	235	254	235	258	0.90
7	34	0.15	12	6.3	0.3	1	15	267	281	267	284	0.90
8	34	2	1.6e+02	2.7	0.7	2	23	345	369	344	369	0.82
9	34	0.047	3.7	7.9	0.5	1	23	417	439	417	439	0.94
10	34	1.4	1.1e+02	3.2	0.4	1	15	447	461	447	464	0.92
11	34	3.2e-05	0.0025	17.8	3.0	2	23	477	498	477	498	0.98
12	34	0.094	7.3	6.9	1.1	2	23	505	526	504	526	0.96
13	34	0.0023	0.18	12.0	2.6	1	21	532	552	532	553	0.86
14	34	0.015	1.2	9.4	5.0	1	23	587	610	587	610	0.98
15	34	0.0012	0.093	12.9	1.0	1	23	616	638	616	638	0.97
16	34	0.047	3.7	7.9	1.4	1	23	644	666	644	666	0.98
17	34	0.062	4.9	7.5	2.1	1	23	671	694	671	694	0.92
18	34	0.016	1.3	9.3	2.4	2	23	704	725	704	725	0.98
19	34	0.047	3.7	7.9	0.1	1	16	761	776	761	778	0.87
20	34	6e-05	0.0047	17.0	1.0	1	23	804	826	804	826	0.96
21	34	0.014	1.1	9.5	8.0	1	23	833	855	833	855	0.98
22	34	0.4	31	5.0	0.4	1	21	861	881	861	882	0.87
23	34	0.0021	0.16	12.2	2.4	1	23	891	913	891	913	0.98
24	34	5.5e-05	0.0043	17.1	0.7	1	23	919	941	919	941	0.98
25	34	0.0041	0.32	11.2	4.2	1	23	947	969	947	969	0.98
26	34	3.7e-05	0.0029	17.7	0.9	1	23	975	997	975	997	0.98
27	34	1.4e-05	0.0011	19.0	0.5	2	23	1003	1024	1003	1024	0.97
28	34	2.6e-05	0.002	18.1	2.9	1	23	1030	1052	1030	1052	0.98
29	34	8.8e-05	0.0069	16.5	3.7	1	23	1058	1080	1058	1080	0.99
30	34	0.082	6.4	7.1	7.9	1	23	1086	1108	1086	1108	0.98
31	34	0.0022	0.17	12.1	2.3	1	23	1114	1136	1114	1136	0.97
32	34	0.048	3.7	7.9	2.0	1	23	1142	1164	1142	1165	0.95
33	34	4.7e-05	0.0037	17.3	4.1	1	23	1173	1195	1173	1195	0.98
34	34	0.00036	0.028	14.5	1.8	1	23	1229	1252	1229	1252	0.97

Sequence Information

Coding Sequence: ATGATAATTATCATTGCTCGCTATGCCAACAAATGTCGACAAGTTATAGTTCTTCTATTCAACATCGTCAATACTGATTTTGAAAATTTGTTTGAGCCAGATGACGTTAAAAATGTCTGTGACTTGAAAGAATTAAGAAAAAGTCGTGTCGTAGCGAAAAAACCTAAAGATGAATTATGGAAGCCGTCGGCTCGGATTGAAAAAAGTTTCAAAGAAAATAAGGAGTCAAAATCATCTCAAGTACAAAAAAATTATTTTTCTAAGAATAGTTGTAATTGCAAAGAATGTGATCGTGAATTCGATTACTCATCGGCAGTAAATTTGCGCTTCGAAAACAGTACTGGTAAGCATTTTTATAAGTGTCCTAGATGCAATTTTGTGAGTTATTATTTGGCAAGTATTAAAAATCATATACGTTCGCACACTGGAGCTAAGCCATTTAAATGTTATACTTGCCGAGCGAAATTCCCTACTTCTCAAGCTCTTTTGAAACACAAGTATAACTGTCATGTGTTATCACCGAAAACTGATGATCTGAGGTGCAGATTCTGCAAAGAAATATTTGAAGATAAAGCTACTTGGAAAAAACATGTCGATGGGCATAAAGTTGGAGATTTTTACGCATGCAGTATTTGCAATTATCAAAAGAAAAATTCTAGCTCGCTGGAGAGTCACATGAATAAACATGCCAACAAAGAATTGTTTATTTGCAACGAATGCGGAAAATCATTTCAACAAAAGGGGCTGCTGAAAGAGCATTGGGGTTTTTATCATATTTCATTATTACGAAAAAAAACATACAAATGTCCCATGTGTTCTTACAATTTCATTTATTCCAAAAACATATTAAATATTGTCACCCTGGCAATAAAGTTTACAAGTGTGATGATTGTCATTATGCCACTGACATATTTTTGTCATTGCAAACTCATCGATGGACACATGTCAAGAAACGTCCGTATCGATGTCGTCTATACACTACAAAATCTTAAAATCCATTTCCGGAGAGTTCATACAAAAGAGCGGCCTTTCGTGTGTCCACACTTTCCGTGTAAATTTGCGGGAGCATATTCTCAAGATCTAAAAAGTCATATAAGAAATAGACATTTCAAGAATGATAAAACTGTTTCGCTAGATCATCTCAATAATAACCGTTCTCGCTCCCATACACATTTAAAAAGAAATTCCTCGAGTGTTAATTTGAAAGAATTAAAAACTGATAATGAAATTAATCCTATCGAAAAAATGTACCCGTGTACGGATTGCACATTTTCAACACCATATCTAAATGAATTGAAAGTTCATTCAAGTCAACACGAAACTAGAAGTTTACAAAGTTTTAAGTGTGATGCTTGTGGTAATAAATTTATTAATAAGGATCAGCACATCCGAAATTATCATTCATTATTTCCTTCAAATAAAGAAGCAAAATGTTCATTTTGTAACGAAACTTTTACTAATAACTATAACATGAAGTTGCATCTTAAAACTCATGCTAATAAAAACTTAAAAAAATGTGGCATATGTCTTTACATCACTTCGAGTAAAAAAAAGTATCGAATACATATGAGTGATCATAAAAAAAAAAAATTATTTACTTGTAATGATTGTAATAAATCATTCCGGAGCAAAAATTACTCAAGAATTCATACAAAAAAGACGTCCTTCGTGTCCTCACATCCTCCATATACTTTTGCTGAAGCAACTTCTCGGGATCTAGAAAGACTCTCCAAAATGGAACGTACCAAGAATAAGTACTATAAATGCACTATTTGTAATTTTAAGACTGGTACTTTACGTTGTCTTAATAATCATTTACGTCGCTTTCATAATGATAAAACTCCATACATCTGTACGGAATGTAGTTACAGTAGTACTAATTTAAGAGCATTGAATGTTCATATAAATCATCACTTTGCCAAAGAAACTTATCGTTGCTCTCAATGTACGTACTCTACTGCATGTAATAGTGATCTTCTATCTCACATTGAAATTCACAAAAGTAAAAAGTATAAATGTGATATTTGTAGATCGCTATTTTCAAAACAAGAAAGTTTTAGTAAGCATAAACTCGATAATCATACAGTATTTCCGTTCAATCAAACAGCTAAATGTGAATTTTGCGACGATCAATTTACAAATAAATATAATAAAAAGTTGCATCTGATGACTCATGAGCATAAGAATAAAAAATTTCGTAAATGCAATCGATGTATTTACATAACGTTGTCCGTAAAACAATTTAAAAAACATATGGATGAGCATAAATTTAATAGATTATTTATTTGTAATGATTGTAGCAAGTCTTTTCCACTCAAGAAGTTGCTGATAGAAGACCAGGTGACACCCGATGCTTCTATTTCTTCTCATCCTGAATCTGGAACTCAATCCCAGGCAACAGAAAAATCCCATCCATGTAAAATTTGTAAAAGAAAATTCAACAGTTTAAATCAATTAGAAATTCACATGGGAATTCACGACGTTGGAGATAAATTATTTAATTGTTCTGTATGCCATGCGAATTTCCATAAGTTTCATCTTTTAAAACGGCACATGCGGATTCATAAAAGCACCAAAACATTTACATGTGAAATTTGCTCAACAAAGTTTGAGTGGGCTGAGTTTTTGGAACAGCACAAAAAGCGTTGTAACGATGGTAAAAAGCCATATCATGTGTGCAGTGTTTGCCAAATGAAACTCAGCAGTCTTTTGAAACTAAAACAACACATGCGTACTCATAAGGAGAAACAGACACATGAATGCAGCGTTTGTAAGAAGAAATTCATCTGGCCGTCACTACTAAATGTTCATATGCGCATCCACACCGGTGATAAAAGATATGAGTGCGATATTTGCCATGTGAAGTTTACTGCGGCTTGTAACATGAAGAAACACAAGCTCACGCATACAGGCGAGAAACCCTTTCAGTGTGACATTTGCCAGGCAAAATTTACTCGATCAATCAGTCTTACTCAGCATAAAGCAACTCATACCAACAGAACTGAAGAGTGTGAAATTTGTAAATCGAAATTCAGGGGACCCTGGAATCTAAAGAGACACATGCGGATCCATACTGATGAAAAACCTTTCAAGTGCGATGAATGCCAATCGACATTCTCTCAAAAATTTTACTTGTCAAAACACATTCGTCTTCATTACAACAAAAAATCTTATGAGTGTGATTATTGTAAGATGAAATTATCTCAAAAATATTGCTTGATTCGTCATATGAAGATTCACGTGGGTAGTAGCGCGTACAAGTGCGACGAGTGCCAAAAAAAATTCCATTCCATACGAGGTTTGAGTCATCACAAGTGCATCCATACCGGAGAAGTCCCATTTGAATGTGATGTCTGTAACAAAACATTTTTGAAGTTAAAACACTTGCTCAAACATGAAAATATTCATAAAAAGAAGAAAATGTACCACTGTGATATTTGTAACGCTGGATTTAACCAAGTCGGTCATGTTGCGGTCCACAAAATAAGGCATCATGAATCCCAATCGTCTCAAAATTTTAAATGCAAATTTTGTGATGAATCTTTCAAGAGTAGTTACTTCTTGAAGCTTCACCTTAAGAATCATAAAAATGAAAAATATTTTTACTGTAACATTTGCTTGTACAAGACAAGATGGCCTATTTCAATTAAAGTTCATACTCAAAATCACTCAAAAACAGGTTGGTATATTTGTTACGATTGTGGAAGATCATCTAAAAGAAAAATTTTGTTACTACAGCATAGGAAGAAGTTTCATAGTTCTTAA
Protein Sequence: MIIIIARYANKCRQVIVLLFNIVNTDFENLFEPDDVKNVCDLKELRKSRVVAKKPKDELWKPSARIEKSFKENKESKSSQVQKNYFSKNSCNCKECDREFDYSSAVNLRFENSTGKHFYKCPRCNFVSYYLASIKNHIRSHTGAKPFKCYTCRAKFPTSQALLKHKYNCHVLSPKTDDLRCRFCKEIFEDKATWKKHVDGHKVGDFYACSICNYQKKNSSSLESHMNKHANKELFICNECGKSFQQKGLLKEHWGFYHISLLRKKTYKCPMCSYNFIYSKNILNIVTLAIKFTSVMIVIMPLTYFCHCKLIDGHMSRNVRIDVVYTLQNLKIHFRRVHTKERPFVCPHFPCKFAGAYSQDLKSHIRNRHFKNDKTVSLDHLNNNRSRSHTHLKRNSSSVNLKELKTDNEINPIEKMYPCTDCTFSTPYLNELKVHSSQHETRSLQSFKCDACGNKFINKDQHIRNYHSLFPSNKEAKCSFCNETFTNNYNMKLHLKTHANKNLKKCGICLYITSSKKKYRIHMSDHKKKKLFTCNDCNKSFRSKNYSRIHTKKTSFVSSHPPYTFAEATSRDLERLSKMERTKNKYYKCTICNFKTGTLRCLNNHLRRFHNDKTPYICTECSYSSTNLRALNVHINHHFAKETYRCSQCTYSTACNSDLLSHIEIHKSKKYKCDICRSLFSKQESFSKHKLDNHTVFPFNQTAKCEFCDDQFTNKYNKKLHLMTHEHKNKKFRKCNRCIYITLSVKQFKKHMDEHKFNRLFICNDCSKSFPLKKLLIEDQVTPDASISSHPESGTQSQATEKSHPCKICKRKFNSLNQLEIHMGIHDVGDKLFNCSVCHANFHKFHLLKRHMRIHKSTKTFTCEICSTKFEWAEFLEQHKKRCNDGKKPYHVCSVCQMKLSSLLKLKQHMRTHKEKQTHECSVCKKKFIWPSLLNVHMRIHTGDKRYECDICHVKFTAACNMKKHKLTHTGEKPFQCDICQAKFTRSISLTQHKATHTNRTEECEICKSKFRGPWNLKRHMRIHTDEKPFKCDECQSTFSQKFYLSKHIRLHYNKKSYECDYCKMKLSQKYCLIRHMKIHVGSSAYKCDECQKKFHSIRGLSHHKCIHTGEVPFECDVCNKTFLKLKHLLKHENIHKKKKMYHCDICNAGFNQVGHVAVHKIRHHESQSSQNFKCKFCDESFKSSYFLKLHLKNHKNEKYFYCNICLYKTRWPISIKVHTQNHSKTGWYICYDCGRSSKRKILLLQHRKKFHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -