Basic Information

Insect: Cotesia chilonis
Gene Symbol: -
Assembly: None
Location: scaffold12:6700-33198[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 34 4.3 3.4e+02 1.7 0.2 14 23 4 13 2 13 0.88

2 34 0.38 29 5.0 1.3 1 23 36 58 36 58 0.95

3 34 0.16 12 6.2 0.2 1 19 64 82 64 84 0.95

4 34 0.00028 0.022 14.9 2.9 1 23 94 116 94 116 0.98

5 34 0.0011 0.089 13.0 0.1 1 23 122 144 122 144 0.98

6 34 6 4.7e+02 1.2 0.1 1 19 150 168 150 170 0.89

7 34 0.00018 0.014 15.5 5.8 1 23 220 242 220 242 0.98

8 34 0.0016 0.13 12.5 3.5 1 23 248 271 248 271 0.97

9 34 0.27 21 5.5 2.7 3 21 279 297 277 298 0.91

10 34 0.0034 0.26 11.5 1.9 1 23 305 328 305 328 0.98

11 34 0.0008 0.062 13.4 0.4 1 23 333 355 333 355 0.99

12 34 0.0088 0.69 10.2 0.9 1 23 361 382 361 382 0.97

13 34 0.035 2.7 8.3 4.6 1 23 439 462 439 462 0.96

14 34 3.7e-07 2.9e-05 23.9 1.2 1 23 527 549 527 549 0.98

15 34 4.2e-07 3.3e-05 23.8 1.2 1 23 555 578 555 578 0.97

16 34 0.0003 0.023 14.8 0.9 1 23 584 607 584 607 0.96

17 34 0.06 4.7 7.6 7.1 1 23 613 636 613 636 0.95

18 34 0.00012 0.0096 16.0 1.6 2 23 647 668 646 668 0.97

19 34 0.59 46 4.4 0.7 11 23 672 684 669 684 0.91

20 34 0.001 0.082 13.1 1.5 1 23 722 744 722 744 0.98

21 34 5.6e-05 0.0044 17.1 3.2 1 23 750 773 750 773 0.96

22 34 0.00017 0.013 15.6 1.0 1 23 780 803 780 803 0.98

23 34 0.0012 0.096 12.9 4.1 3 23 940 961 939 961 0.93

24 34 0.0025 0.2 11.9 2.1 2 21 966 985 965 987 0.94

25 34 5.9e-05 0.0046 17.0 0.8 1 23 1021 1044 1021 1044 0.95

26 34 0.00047 0.036 14.2 1.2 1 19 1050 1068 1050 1070 0.97

27 34 0.21 16 5.8 0.4 2 23 1132 1151 1131 1151 0.84

28 34 0.00072 0.056 13.6 7.1 1 23 1157 1179 1157 1179 0.99

29 34 0.00029 0.023 14.8 3.4 1 23 1185 1207 1185 1207 0.99

30 34 0.014 1.1 9.5 1.4 1 23 1213 1235 1213 1235 0.97

31 34 0.0036 0.28 11.4 0.7 1 23 1241 1263 1241 1263 0.99

32 34 9.2e-05 0.0071 16.4 3.1 1 23 1269 1291 1269 1291 0.99

33 34 0.013 1 9.6 5.1 1 23 1297 1319 1297 1319 0.99

34 34 2.1e-05 0.0016 18.4 3.0 1 23 1347 1370 1347 1370 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	34	4.3	3.4e+02	1.7	0.2	14	23	4	13	2	13	0.88
2	34	0.38	29	5.0	1.3	1	23	36	58	36	58	0.95
3	34	0.16	12	6.2	0.2	1	19	64	82	64	84	0.95
4	34	0.00028	0.022	14.9	2.9	1	23	94	116	94	116	0.98
5	34	0.0011	0.089	13.0	0.1	1	23	122	144	122	144	0.98
6	34	6	4.7e+02	1.2	0.1	1	19	150	168	150	170	0.89
7	34	0.00018	0.014	15.5	5.8	1	23	220	242	220	242	0.98
8	34	0.0016	0.13	12.5	3.5	1	23	248	271	248	271	0.97
9	34	0.27	21	5.5	2.7	3	21	279	297	277	298	0.91
10	34	0.0034	0.26	11.5	1.9	1	23	305	328	305	328	0.98
11	34	0.0008	0.062	13.4	0.4	1	23	333	355	333	355	0.99
12	34	0.0088	0.69	10.2	0.9	1	23	361	382	361	382	0.97
13	34	0.035	2.7	8.3	4.6	1	23	439	462	439	462	0.96
14	34	3.7e-07	2.9e-05	23.9	1.2	1	23	527	549	527	549	0.98
15	34	4.2e-07	3.3e-05	23.8	1.2	1	23	555	578	555	578	0.97
16	34	0.0003	0.023	14.8	0.9	1	23	584	607	584	607	0.96
17	34	0.06	4.7	7.6	7.1	1	23	613	636	613	636	0.95
18	34	0.00012	0.0096	16.0	1.6	2	23	647	668	646	668	0.97
19	34	0.59	46	4.4	0.7	11	23	672	684	669	684	0.91
20	34	0.001	0.082	13.1	1.5	1	23	722	744	722	744	0.98
21	34	5.6e-05	0.0044	17.1	3.2	1	23	750	773	750	773	0.96
22	34	0.00017	0.013	15.6	1.0	1	23	780	803	780	803	0.98
23	34	0.0012	0.096	12.9	4.1	3	23	940	961	939	961	0.93
24	34	0.0025	0.2	11.9	2.1	2	21	966	985	965	987	0.94
25	34	5.9e-05	0.0046	17.0	0.8	1	23	1021	1044	1021	1044	0.95
26	34	0.00047	0.036	14.2	1.2	1	19	1050	1068	1050	1070	0.97
27	34	0.21	16	5.8	0.4	2	23	1132	1151	1131	1151	0.84
28	34	0.00072	0.056	13.6	7.1	1	23	1157	1179	1157	1179	0.99
29	34	0.00029	0.023	14.8	3.4	1	23	1185	1207	1185	1207	0.99
30	34	0.014	1.1	9.5	1.4	1	23	1213	1235	1213	1235	0.97
31	34	0.0036	0.28	11.4	0.7	1	23	1241	1263	1241	1263	0.99
32	34	9.2e-05	0.0071	16.4	3.1	1	23	1269	1291	1269	1291	0.99
33	34	0.013	1	9.6	5.1	1	23	1297	1319	1297	1319	0.99
34	34	2.1e-05	0.0016	18.4	3.0	1	23	1347	1370	1347	1370	0.97

Sequence Information

Coding Sequence: ATGGATGAATATTACCTTAGGCTTCATATGAATACTCATCGAAAAGGGAGAATGTATAAATGTCATTTGTGTGAATTTATGGCACCGTTAAGACATCATAAAATTTATCAATGTATGAAGTGCGACTTTGCTGCATTCAGTAGAACAAGTTTCAAAACACACACCGAAGCTCATAACAATAATAACTCATTCAAGTGTCCTAAATGTCCATTTATTGCTATTAACAAAAACACCTTCAGGGCACATTTTATATGTAAACATAGTAATGTTAAAAAACCGTTTCAATGTCAAATTTGTCATTTTTCGACATACTTTCAATCAGCTTTACAGCAACATATTAAAATTCACAGTGCAGACCGTTCGTACGAATGTCAATACTGTCCATACGCTGCCATTTCTAAAGCTTACTTGGCAATTCATCTTCGCAATCATTTTACTCAGCCTAAGTATCCATGCAGTGTATGTTCCTTCTCAGCGTTATCTGCAGATCAATTAAAAAATCATTTCATATGTCATAATTCTGAAATCCAAGTACCTGAAAAAATAGTAAACACTTTAACGGCAAATGTAGAATCTGTGAGGAAACCAAATGAAAACTTAGTTGATAAAAATTCTTCGAGTTTTAAAAAGTCAAAGTCGGCGATAGATAAAAAGGAGCACCAGTGCGAAAAGTGTAATTACAAATGTAAACGAAAAAGTGACTTGAAAATTCACTTATTAATTCACTCTGGTGATCTGCCATTCAAATGCCCAAAATGTTCTCATAAAGTTAGACGTTTACCGTATCTCAGAAAGCACATTAAAAATAATCATAATAATGAATTTCCGCACCTATGTCCACATTGTTCACTCGGATTTACTGAATTGATTCAACTCAATAATCATAAATGTCGTTTTGCTGCTGAAAAATTATTTGAGTGCGAGATTTGTAGGAGAAGACTTGCTACAGCTCATAGCTTAAGTACTCACAACCGCACGTATCATTCAGCTGGTTCATTTACTTGCTCAATTTGTCAGGAAATACTTGGAGATAAATACTCACTTGAACTTCATAGAAAAACTCATAAAAATGGAAACACGTTTATTTGCAATAAATGTCCGTTTAAATCGACACAGAGCTCGTTGAAAATTCATATAATGAATCACTTAGGTCAGAAGCGTTATAAATGTGCAGATTGCAATTTTGCGAGTTCATACTTACTAAACCCTTCATTATCCGATGGTTCAACAGGACAATCATCGGATTTTAACGACAATCGTTACAACGAGGTAGATTCAGAGGTCGAAGTAAGTTATAGGATTCATAGCATCGAGTACATTTGTCAAGATTGTTACAAATCATTTAATACAGCAGAACTCCATAAAAAACATGTTTTGACTTGTCACACTGTAGGAAATCGTCTATTGAATATTCCGATTGAATATTTACCGTTTGTCCGTCTTAATAGAATAGATATACCTGATAAAAAAATAAAAACAGAGATTGACACAGAGTCTCACAAAGAATCAAAGACTCACAAATCTGAAATCAATTCTAAGGAAAAAAAAGAAAAACATAGTCCTACTCCAAGAAAAATATACCAATGTGAAAAATGTGGCTATGTATTCAACAAAAAATACAACTTACAGCAACACATCCTTCTACATACTGGTAAAAGACCTCATCAATGTCCTCATTGCCCGTCAGCTTTTCGGAATCCGAGCAATTTAAAAGCTCATATCAAGAGTATCCACACCAATGAACGACCTCATAAATGCCCTTATTGTCCAAGTGCTTTTGTAATTTCTCATAATTTAAAAAGTCACATAGCAAGTATTCATTCTAAAAAACGTCCTTTTAAATGCAACGACTGCGATGCCAAGTTTTGTCTATCACGTCAATTGAATGATCACAAATTCAAGTGTCATCAGATTCGATCATCTGACAATAAAAAACTAAAGTGCCTTTATTGCCATCTCGGATTTACTGAACAGTATTACCTGACTGCCCATCTGAATACTCACAGGCACGGAAAAGATTGGAAAAATTTACGGCAACACATCAAGATTCATCAAGACACAGCGGTAGCTTCGCAATCTAATGTGAAAACTTCCTTGCGTTCCTACTCAGCTAAACTTCATCAGCGCGATAGCTGCTCTGAGGTCAACAGATCTAAAAGCAGTTTTAAGTGTAGTATCTGTTCCTATACTACGAAATCTCTAGAGTTGTTGAATGAACACACTAAAAATCATAATAATAATAAATTGTTTAGTTGCAATGTCTGCGACAAGACTTTCGGAAGAAAAAAATTATTACAAGAACACCGTGTCACTTGTCATGCTCTGCAGAGTAGCAGATACTCGTGTAATGAGTGTCAACTGACATTTTCTTACTTCGGCCGTCTGTCTCGTCATCTTAGAATTGTTCATGGAACTGAATTCGACACTACACATGACGACTGCAATATAGATATTAAAGAGGAACTTGATTGGAAATATTCAATTCCCAAAGAAAGTAGTATGGAGAAAAATACAGCCGAGTGTTTACTTGACAGCTACAAATTTTCAGAAGAAAATATTTTTGAATCTTACAAAGAAGGTGATTACACCTCCAGCATTCCCGAGGAATTTAATGAAGATATCCACGAGCACAAGAGCAACTTCACTCTTAGTAATAAATTGGACCAGAAAATTAATGAAGATAACAAATTAAAAGTTAAAGTAAATAGTTATAAAAACAATCAATTTTTTTATTGTCACTTTTGCAAATATAAAACGCTGGCGCCAAATCGACTTGAAAATCACGAAAACTTTCATTTAAACCCTAACGTAGCTATTTGTGATCATTGTGGTCGATGTTTCAAGTCAAAAATGTCTGTTGAAAAACACTTGACACTCTATCACAATTTAGAATCTCAATGTGATATTTGCCAACAAAAGTTTGTTGATCAAAATGATTTGCAACTTCACTTGAAATGTCATCGGAGAGGAACATTTTATTATTGTGATTTATGCCAATTCAAAGCTGTAAGATTACTTAGTATTAAAGATCATAAAACCCAGCACATGAGACCTGAATGTTATGTTTGTGATTATTGCGGTCGACCATTAAAGTCCAAAATTTCTCTTCAAAAACACTTGAATTTCTACCACATGAAACCTCATCTCTTTACTTGCCGTAAATGCGATCGACGTTATAGCTCAAAGGCATGGTTAAAAAAACATTCAGACTTTGATTGTGGTAACATAATTAATGAACATAATGATTGTGATAACACGACTGATGAATATAATGATCGTGGTAACACGATTAATGAACATAATGATCGTGGTTATATATCCGAGTTTCTTAAAAATTACAATCAAGTCAAAAAGCAAGTTATTAGCGAAAATAAAATAAAGAAACACTTCAAGAAATGCCCCGAGTGTGATTTTGTGACTATGTGGAATTTATCCCGTCATATGGCCCGACATAGCTCTGATCGACCTTATAAATGTTCTCATTGCAACTATTCTAGTAAAACTAAGTGTACGTTGAAAATTCATATTCTCACTCATTCAGATGAGAAAAATTTTAAATGCTCAGTATGTCCATATCGCAGTAAATTTCTATCTTGTTTGCAGCGGCACATTCGTATTCACACTGACTTTCGTCCCTATAAATGCAGTCAATGTTTATACGCAAGTGCCTATTTAGATAATTTAAAGCGGCATAGTTTTACTCACACTGGTACTCGTCCCTTTAAATGTTCAGCATGTTCCTTCAGCAGTATAACTTCTCAAGGTCTTCGGGTTCATTTAAGAACTCATAATACTATAAAATCATTTAAATGTACTCAATGCTTGTATGCCACTACAACGAAATACAATTTGATACGGCATACTCGAAGGCATTTAGGAGAAAAACTTTACAAATGTTCACATTGCTTATTTTCTACCAAAACTTTGAGAACTTTCGAGGAACATTTGCGTACTCATGAAGAAAAAGATTCATCTGACACGAATACAAACGAATCAGAAATACAATTAAAGAGTTTAAATAATACAACAAAACAATTGTATTCTTGTTATGATTGTAAAATGTCATTTAAAAGAAAAACATCATTGGAAAAACACTGGAAGTCGCAGCATTATTTCTAA
Protein Sequence: MDEYYLRLHMNTHRKGRMYKCHLCEFMAPLRHHKIYQCMKCDFAAFSRTSFKTHTEAHNNNNSFKCPKCPFIAINKNTFRAHFICKHSNVKKPFQCQICHFSTYFQSALQQHIKIHSADRSYECQYCPYAAISKAYLAIHLRNHFTQPKYPCSVCSFSALSADQLKNHFICHNSEIQVPEKIVNTLTANVESVRKPNENLVDKNSSSFKKSKSAIDKKEHQCEKCNYKCKRKSDLKIHLLIHSGDLPFKCPKCSHKVRRLPYLRKHIKNNHNNEFPHLCPHCSLGFTELIQLNNHKCRFAAEKLFECEICRRRLATAHSLSTHNRTYHSAGSFTCSICQEILGDKYSLELHRKTHKNGNTFICNKCPFKSTQSSLKIHIMNHLGQKRYKCADCNFASSYLLNPSLSDGSTGQSSDFNDNRYNEVDSEVEVSYRIHSIEYICQDCYKSFNTAELHKKHVLTCHTVGNRLLNIPIEYLPFVRLNRIDIPDKKIKTEIDTESHKESKTHKSEINSKEKKEKHSPTPRKIYQCEKCGYVFNKKYNLQQHILLHTGKRPHQCPHCPSAFRNPSNLKAHIKSIHTNERPHKCPYCPSAFVISHNLKSHIASIHSKKRPFKCNDCDAKFCLSRQLNDHKFKCHQIRSSDNKKLKCLYCHLGFTEQYYLTAHLNTHRHGKDWKNLRQHIKIHQDTAVASQSNVKTSLRSYSAKLHQRDSCSEVNRSKSSFKCSICSYTTKSLELLNEHTKNHNNNKLFSCNVCDKTFGRKKLLQEHRVTCHALQSSRYSCNECQLTFSYFGRLSRHLRIVHGTEFDTTHDDCNIDIKEELDWKYSIPKESSMEKNTAECLLDSYKFSEENIFESYKEGDYTSSIPEEFNEDIHEHKSNFTLSNKLDQKINEDNKLKVKVNSYKNNQFFYCHFCKYKTLAPNRLENHENFHLNPNVAICDHCGRCFKSKMSVEKHLTLYHNLESQCDICQQKFVDQNDLQLHLKCHRRGTFYYCDLCQFKAVRLLSIKDHKTQHMRPECYVCDYCGRPLKSKISLQKHLNFYHMKPHLFTCRKCDRRYSSKAWLKKHSDFDCGNIINEHNDCDNTTDEYNDRGNTINEHNDRGYISEFLKNYNQVKKQVISENKIKKHFKKCPECDFVTMWNLSRHMARHSSDRPYKCSHCNYSSKTKCTLKIHILTHSDEKNFKCSVCPYRSKFLSCLQRHIRIHTDFRPYKCSQCLYASAYLDNLKRHSFTHTGTRPFKCSACSFSSITSQGLRVHLRTHNTIKSFKCTQCLYATTTKYNLIRHTRRHLGEKLYKCSHCLFSTKTLRTFEEHLRTHEEKDSSDTNTNESEIQLKSLNNTTKQLYSCYDCKMSFKRKTSLEKHWKSQHYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -