Cchi001140.1
Basic Information
- Insect
- Cotesia chilonis
- Gene Symbol
- SKP1
- Assembly
- None
- Location
- scaffold2:3017719-3025860[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0058 3.9 7.3 0.0 24 43 159 178 159 180 0.92 2 4 0.14 92 2.9 0.0 24 40 293 309 293 312 0.88 3 4 0.15 98 2.8 0.0 24 40 436 452 436 455 0.88 4 4 0.062 42 4.0 0.0 20 45 995 1021 989 1022 0.86
Sequence Information
- Coding Sequence
- ATGTATAGTCAGCAAGCAGTTGTTCTTGAGCATCACCTACTACCTGCTAGTAGATTTTACAGTCACCAATCTCTTGTGTTCAAAGTTTGTGAGTTAAATTTATCAACAATGGCTGAAACAGTCAAGGTCGAAAGCGGTGATCAACAGATTTTTGAAGTGCCCACTAAAATCGTCATGATGTCGGCTACCATGAAATCCATCCTGGATAGTCTCGGTATGGAGGGCCAAGTCAATGAGCAAGCGATTCCTCTAACATGTATCAAGGGAGAGATCCTGGCAAAAGTTATCAAGTGGTGCGAGAAACACGTCGACGATGATCCTAAACCAGATGATGACGATGACAACCCAGAAAAACGAATTGATGATATTCCCGAGTGGGATATTGACTTCCTGAAAGTTGACCAGGAGACTCTCTTTGCCATCGTGCGCGCCGCTAACTTCCTGGACATCAAGGGGCTCATGGAGGTCACCTGCAAAACTGTCGCCAAGTTAATTAAGGGAAAGACTCCTGACGAAATCAGAACACATTTTAACCTCTTAAGCAGTGACAAAGAAGTGTTTGAGGTTGACACCAAGGTGGCTAAAATGTCCGCCACCATTAAGACGATGCTGGAGGATCTCGGCTTGGACGAAGGCGACGACGAGATAGTTCCTCTTCCGAGCATTGAAGGTCCCATTCTGAAAAAAATTGTCGAGTGGGCCGAGTATCATAAGAACGACCCTCCAGCACCGGAAGACGATGACAACAGAGAAAAACGATCGGATGATATTCCCGAGTGGGACGTTGACTTCCTGAAAGTTGACCAGCAAACTCTTTTCGCCATCATCCGTGCCGCTAACTTCCTGGACATCAAGGGGCTCATGGATGTCACCTGCAAAACCGTCGCTAACATGATCAAGGGCAAGACGCCGGAGGAAATCAGAAGAACCTTCAACATCACCCCGATGATGACTAACATTAAACTTCAGGCGAATGATAACGAAATTTTCGATGTAGATGTTGAAATAGCAAAATGTTCGGTCACCATCAAAACCATGTTGGAGGATCTGGGTATGGACGAGGATGACGACGAAGTGGTACCTTTGCCCAACGTTAACTCGGCTATTTTGAAAAAAGTCATCCAGTGGGCGACTTACCACAAGGATGACCCACCACCAGCTGAAGACGATGAGAACAAAGAGAAAAGGACTGATGACATCAGCTCATGGGATGCCGATTTCCTTAAAGTTGACCAGGGTACCCTGTTCGAGCTGATTCTCGCTGCAAATTACCTTGATATCAAAGGTCTTCTGGATGTTACTTGCAAAACTGTCGCTAATATGATTAAAGGAAAGACTCCCGAGGAAATTAGAAAGACTTTCAACATAAAGAACGATTTTTCAGCTGCTGAGGAGGATCAGAATCTAAAGACTAAAAATGCGTCCAAACGTCAGAAAATTCAAGAAGATGAATTAACCCAAATAATAAATTGGGAAAATTTTGAAAAGATTGCTGTAGAATACTATAGTGATGTTGGTTCATTTACTTTAAAATATTCTCAAGTATATGAAGCGCAAAATTATATTAAAAATTTTCTAAAAGAGTTGGACTGTTCAGAATTCATTGGAATTTATTATGACACTCCAATATATTGTATTACCAGTTTAATTCTCGGAATACTGTCATCTGGACGTTCCTTTGTGTACATTACAAAAAACGAAGCCGATTTTCTAAAAGAATCATTAGGTGTTGGATATATTTTCCACTTGAAAAGCACCAAAGACCATGGAGAGCAGACAAAAGTTTTTGAGATTCATCAGCAATCAATTATTCTCTCAAAAACATCTTTTCGCTCTGAAGAGTTGAATAATTCAAAATTTGCATACGCTGTTACAACTTCGGGATCAACTGGACAACCAGTTGTAGTAAGAGTAATTCTAAACATACGCTTTAAAAACTTCGGATCACTGGACAACCAGTTTAGAGCAACACTTTGCACTTTCGCAGATGACTTGAAAAATCATCCTGATGTTTTGTTAAAAGTACTTCACGATAAGAAGATAACATTTATATCAACTACTCCGTCTCTGTTTTTGCACCGCTGGAGGTTGAAAGATCTTGAAGAAACTCTCTTGAGCAAAGAAAGTTGTCTCAAGTTTCTTCTGCTTGGCGGAGAGCCTTTTCCTGATGTAAAAATAATTCGTAATTGCACTAGAATTTTTAATGTCTATGGTATCACTGAAGTGTCCTGCTGGGCAAGTATCAGCGAGGTATTTTTCAATGAAAATTATTCTGATACTGATGAAAGTTCGAATAATTTAGGTACAATTTTGAGTGATACTCTGTTTCAAGTCAGAGCAAAAGATAATTGCAACGAAATTGTTGATGATGGAGAAGGAATTTTGTACATTGGAAGTTCCAGCAGAATTTGTTTGCTTGGTAAGGAAAAATTAGCCGATCTTAAGCTTCCAGTTTATAGAAATACTGGAGACATAGTCACTGTAAATAAAAATAAATTAGTGATTTTCAAGGGTCGGCTAGACAGTTGTGTCAAGAGATTTGGTGCTAAAGTTCATTTGGACAAACTGAAAATTCATTTACAAAAATTGAATTTTATTAAAGATGTTCAATTTATTTTTGACAATAATTTGTCTGTATTAAATTTATTTTTTACTTCAAATGAATTTGATGATCAAAAAGACAACTTGGTGTCGAATGTCTGGTCTCATGTCAAACTTTTACCTACTATTATGCATCCAGACAAAATTCATCATTTAGAAAGCTTCAAAGTTACTGACAGAGGAAAAATTTGTAAAGATTACTTAAAAGATTTTTGTTCAAGACCTTCCATGTCTGCTTGTGATGCTGGAAGTTTGCTGGAAAAAATCTGGAGAGATCATTTGCCAGTAGGAGATAATGGAGCTGAATTACTTGGCTTCTTAGATCTAGGAGGAACATCTGTGATAGCTTTACAAATATCAAGTAATTTATCCAGCGAATCAGGAAATAATTATCCAGAATTAATTGGAATGTTATTTGACAATAAAACATTGCTGGAGTGCAAAGATTATCTTTGTAAAAATTTTAATGATATAAATACTAGTTCTAAAGTATTGAATAGACCAATCAATCTTGATTTTACTTCTAGAAATTATTTACTAGACAAATATATTTGGCAGAAATGTCGGGGTAGAACGGTCATACTTAATCCAGAATCTTATGAGTTATTTGATTGTAAATCAAGTCAGGAAATTTTGAAGAGTATTAAGCTTGAAAATGTTTTTAATTTAAATAAATGCGTGGATGCTTCTCCAACGATTTTTGGATACTCCAATGACCAATCATTTGCAAACGTAAGTTCTCATTCAGGATTAATTTTAACAGTAGATCTTAAAACTAAAGAAAATTGGAAAATTCAATTACCTGACAGGATAGAAGGTTCTACTTTAGTGATAGATAATTTCAAGGGAATTGTTGGCTGTCATGATGGATTTATTTATTGCTTGCATCTGAAGACTGGTCAGATTTTCTGGTCATTTGAAACGGGAAATATTGTTAAATGTTTAACAGCTGTTTGCAGTGAAAAACTAAATATTTTCATCGGATCTTACGACCATTTTGTCTATTGCATTTCTTTGGAGGGTTCCCTTGTTTGGAAACTAAAAGTTGACGGCAGTACTTTAGCGACGCCTTTGGTACACACCGAAACAAATGCAGTTATTTTTAGTTTGTTGAACTCTAATTGTATTTCTGTGGATCAAAAAACTGGTCAAGTGAGGTGGAAATATCAATGCAAGAGTTCAATATTTTCTACACCAAATATTTCATCAAATATATTAATTTTAGCTGATGTTTGTGGTAATATAAGAGGACTTGATATAAATAATGGAAATGAATTATGGATTTTTAGTATTTCTGGTAACATTTTTTCTGATATTGTAATCTGTACTGATGCTATAGCAAACAGTTTTATGTTTACCAGTAAAAATGGATTTTTTTACAAATATTATTTTTATGAAACTCAACACCCAGAATTGCATTACAAAGTTGATTTAGGATCATCAGTAGTAGCAACTCCGTGGGTGGAAAAAGATCTTGCTGTTATTGTAAGAGAAGACGGTAATTTAAGAATAATTGATCTGAAAGATGGAAAATTTTTGTACAATTTTATCCTCAGTGGTGATTCTTTTTCGTCACCTGTACTTCACAACAATATTATTGTCGTTGGGTGTCGAGATGACAATCTTTACACTCTTTATCTGTCAGATTAA
- Protein Sequence
- MYSQQAVVLEHHLLPASRFYSHQSLVFKVCELNLSTMAETVKVESGDQQIFEVPTKIVMMSATMKSILDSLGMEGQVNEQAIPLTCIKGEILAKVIKWCEKHVDDDPKPDDDDDNPEKRIDDIPEWDIDFLKVDQETLFAIVRAANFLDIKGLMEVTCKTVAKLIKGKTPDEIRTHFNLLSSDKEVFEVDTKVAKMSATIKTMLEDLGLDEGDDEIVPLPSIEGPILKKIVEWAEYHKNDPPAPEDDDNREKRSDDIPEWDVDFLKVDQQTLFAIIRAANFLDIKGLMDVTCKTVANMIKGKTPEEIRRTFNITPMMTNIKLQANDNEIFDVDVEIAKCSVTIKTMLEDLGMDEDDDEVVPLPNVNSAILKKVIQWATYHKDDPPPAEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFSAAEEDQNLKTKNASKRQKIQEDELTQIINWENFEKIAVEYYSDVGSFTLKYSQVYEAQNYIKNFLKELDCSEFIGIYYDTPIYCITSLILGILSSGRSFVYITKNEADFLKESLGVGYIFHLKSTKDHGEQTKVFEIHQQSIILSKTSFRSEELNNSKFAYAVTTSGSTGQPVVVRVILNIRFKNFGSLDNQFRATLCTFADDLKNHPDVLLKVLHDKKITFISTTPSLFLHRWRLKDLEETLLSKESCLKFLLLGGEPFPDVKIIRNCTRIFNVYGITEVSCWASISEVFFNENYSDTDESSNNLGTILSDTLFQVRAKDNCNEIVDDGEGILYIGSSSRICLLGKEKLADLKLPVYRNTGDIVTVNKNKLVIFKGRLDSCVKRFGAKVHLDKLKIHLQKLNFIKDVQFIFDNNLSVLNLFFTSNEFDDQKDNLVSNVWSHVKLLPTIMHPDKIHHLESFKVTDRGKICKDYLKDFCSRPSMSACDAGSLLEKIWRDHLPVGDNGAELLGFLDLGGTSVIALQISSNLSSESGNNYPELIGMLFDNKTLLECKDYLCKNFNDINTSSKVLNRPINLDFTSRNYLLDKYIWQKCRGRTVILNPESYELFDCKSSQEILKSIKLENVFNLNKCVDASPTIFGYSNDQSFANVSSHSGLILTVDLKTKENWKIQLPDRIEGSTLVIDNFKGIVGCHDGFIYCLHLKTGQIFWSFETGNIVKCLTAVCSEKLNIFIGSYDHFVYCISLEGSLVWKLKVDGSTLATPLVHTETNAVIFSLLNSNCISVDQKTGQVRWKYQCKSSIFSTPNISSNILILADVCGNIRGLDINNGNELWIFSISGNIFSDIVICTDAIANSFMFTSKNGFFYKYYFYETQHPELHYKVDLGSSVVATPWVEKDLAVIVREDGNLRIIDLKDGKFLYNFILSGDSFSSPVLHNNIIVVGCRDDNLYTLYLSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -