Basic Information

Insect: Cotesia chilonis
Gene Symbol: lola_1
Assembly: None
Location: scaffold16:1332552-1363968[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.4e-08 3.3e-05 23.2 0.1 9 40 362 394 359 399 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.4e-08	3.3e-05	23.2	0.1	9	40	362	394	359	399	0.87

Sequence Information

Coding Sequence: ATGGAGGACGATCAGCAGTTCTGCCTTAGGTGGAACAATCACCAAACGACGTTAATTCAAAATTTTGATACATTGCTGGAAAGCGGTACCTTGGTCGACTGCACCTTGGCAGCGGAGGGGAAATACCTTAAGGCCCACAAAGTAGTCCTCTCCGCGTGTAGTCCATACTTTGAGGGTCTTCTTAGTGAGCACTATGACAAACATCCTGTCTTCATCCTCAAAGATGTTAAGTTTAAAGAACTTAAAGCCATGATGGACTACATGTACAGAGGAGAGGTTAACATCTCTCAGGACCAATTGGCAGCTCTTTTAAAAGCCGCCGAGTCGTTACAAATCAAAGGGCTCTCGGAAAGTAAAACCGGCAGCAGTGGTAGTACAAGTAGCAGTAAGGCAGAAACAAGATCACAAAAGACTGTACAACCCTCAGCCCCCTCGTTGGACATTCCTCACTCGTCTTCCGGCCTCACAATTGAGAAAAACAACAAAGTTCCTCGTCAAAGTCTCGCCCAGGCCTCTGTTGGCGATTTACCCGAAGATTCCGCAATAAGTCCAAACGGACGAAAACGTAAAAGATACAGGCGAAGAAGTCTAAACGATGACAACCCAATTGACAACCACGAAACCTCAAACTCGAGCGACATGTCTCATCAGCCCATGAACGTGCCTGCTCTTGGTGTTGCCCCGATGCCTGTTGAAAAACCTGAGCCTAATGACACACTGATTGAGCCAAAGTCTGAGTACCTGGATGAAGCTGAGGACAGTGTTGAAGACTTGACACTTGATGATGAAGGAATGGATGATACTATGGATGACGGAAACAGAGCCGGACCCTCTCACGACCCCTCCCACCCTGGTAGGGGGGGAGCGCGGTCTTGTACGAGAGGTAATTTGGTCGCTGGTGGTGAGACGGACACCACCAGCTGGGCATCTCATTTCCTCGATTGTAAAAAGGTATCGATTGTCAGCAATTGCTATATTAATCAGCGACGAGAATCGCGTCCGGATGTTGACGTGTCCGCGTTGCTCAAGTCACTCGCCAACAAGCAGGGTAGAAAATATAGTTTAGACTGCGTTAAAAAATCCCTGGAGGCAATATTACAGCAAGGTGTTAGTACTACTCAGGCATCTGAAATGTACGGGATTAATCGATCTACTCTGCAATTTTATTTGAAAAAATTAAATGTCGTAAGACGCCGTTGGAGACAACCCGCCTCTGCTTTAGCCCAGGAAGCTGCACAGGCTCATCGCGACTCTCAAGTTGTACACCGAATATCAGGAGCAGCTTCCTCGGCGGGTCAGCTTCACCCGATGACAGATTATCGCAGACTCGCTTGTCCTAGCTGTGGCAAAAGTTACAAGTATAGAGGCGGATTATCTCAGATACAGACTAGCTTGAAGATAAAACCTAAGCAAATAAAGCAGGACCCGCTGGCCTCCTCTTCCGGCGTAACGGTCAAGCCCGTGGAGTACCGGTGTCCCAACCCGAACTGCAATAGCGTCTATAAGTGGAAGAATAACTTAACCAAGCACATGAATTACGAGTGTGGGAAGCCTCCGCGGTACATGTGCTCCCATTGCAATTACCAGTCGCCCTGGAAGAGCTACGTGTTGAATCACGCCGCGAGCCGGCATCCTACCGATCAAATAAACGTCATCGAGCTGAGCATCACCACCAAGAAGCAAACCGGGAACTTTGTCTGTCCCAATCCCCATTGCACCAGAGTCTACAAGTACAAGGCGGACCTCACTCGGCACATCAATTATCAGTGCCAAAAACCGCCAAGGTACAAGTGTCCGTACTGCCCCAAGGAGTCCAATTGGAGCGGTGGAATCAAAAAACATATTCGTAGTTTTCATCCTCAGCAGAACCTTCATCTTCTCAGCATGTTCCATTGTTTTGACAGTCTTCGCTCTTGCCAACTAACAATTTTCATTGGTTCCACCGCTAGTGGGCCGCAGAAGGACTCTAGTCTTCGGTACTCGTGTCCAAAGTGCAATCGTAGTTACAAAAATTACGGCGATATGAGAAAACACTTGCGTTTCATGTGCGGACAAGCTCCGCGGTTTCTTTGTCCTTATTGCAATAGATGCTCAAATAATTCCTCGAACATGTACGTCCACGTTCGCAGGGCTCACAAGGGTAGGGATGTCTTCTTGGTTGACGCCTATGACAGCTCACGTCACACTAGAAAGCAAGGAAACAAATCTCCGGGCTCTAAATATCCCTGCGATAAATGCAACAGTGTGTTTAACCGAAAAGCCAACCTTAATTTTCACATACGATGGGAGTGCGGCCTACCGCCTAGGTATAAGTGCCCTTACTGTCACTTGATGTCTAAGAAGACTACTAATATTAGAAAACATATTCAGAGGAGGCATCTTGGCTGTGAAGTTTATGTACATGATGTATATTGTCCTGAAAAATTTATTAATATTACGCTGGGCGGCGTAATGACAGACGAAGGCCTAAAGTTTCCATGCCCCAAGTGCGGAAACATGTACAGCAAAACGTACCATTGGAAGCACGTGAACTACGACTGCGGAGTGTTGCCGCAGTTGCGATGTCCGCACTGTCCCTACGCAGCAAAGCACACTTCAAACGTAAAAAGACACATCCGGCGAATCCATCCGGGCTCGCAAGTGTTTGTGATCGACACCAGAGGCCACAAATTGGTCGGAAAAGCCGAGGTTCCCGTGCGACCAATGCACAAGCGTCTTCAACCGGAAAGACAACCTGTGCTACCACAAGAAATTCGTCTGCAACCAATTGCCGAGGTTCTGCTGCCCCTACTGCGTCTATCGGTCCCGCCATGTATCCAATACGCGTGCGCATGTCCTCAGAAAGCACCCCGGGACCAGAATTTTAAATTTTACCAGCCGCAGCGGAACGCGCGTGAGTCGCGCCGCGGAGTTCACATTTGCCCGAAGTGCGGCGGGATGTTCAACTGGTCCTGGAACTTGCAGCAACACTTGAAGTACGTTTGCGGCCAATCTCCAAGATTCAATTGTCCGTACTGCAGTTACAGGACGCGACACACTTCAAATGTCCGCGCGCATGTAAGAAGACAACATCCGGACAAGGAGATCTATATATCGAAGACTCTGTGTGGTTCCAGCGAAGACCTCGTCGCGTCAGCCAGAGCGATCCCAGTGCTCCAAAGTACCCCTGCAGCAATTGCCAAAGTTTCGAGTGCGGACAAATGCCCAGGTTCAATTGCCCCTACTGCACCTATCGCACTAGACACTCGTCTAATGTTCGCGCACATGTCAGGAAAATTCACCCGGGTCTTCAAGTTTATGTTGTTGATATTGCTAAGTTTCTTGAGAAGAAGAAAAAGAAGACTTAACGCTGTGCAGGTTAAGATTAAGTGTCCAAATTGTCCAAGTGTGTATGCCCATGAGTTAACACTAAAAAATCATCTGAAGTACGAGTGTGATTTTCTGAACGAGGTTGGCGAGCCAGTAAGGTACGAGTGCCTGGATAACGCGCCGACCAAAAAATTCGTCTGTCCAAATTTGTGCGGGAGCTCCTTTAGTCATAATTACAGTCTGACCAGGCACTTGAAGTACGAGTGTGGTCAGGAACCACGGTTCAAGTGTCCCTACTGCGATTTGCACTACAAGCGCACTTCCAATGTCACCCAGCATATCAGGACTAGGCATATCAACTGCACCACTTATGCCATCGATATTATTGATAACAAGATTAAATTTGTGATGATAAAAAATAAATACCACTGTCAAAGTTGTCCAAGAATTTTTAACTCCGAGTGCTCGGTGAAGCGGCACCTCAAGGAGTGTGGGATTGAGCCGCGGTACCAGTGCGCTTACTGCCAGTACACAGGAAAAAGAAAGTTCCAAATAACGCGGCACACTAAAATAAAACATAAAAACCAAAACTTGAAAATAATTGATTTATTTATAATTTTTGCCAAAAATCAAAAGAAGAAATATGAGCGCTACCAGTGCGAGAAACCGCCGCGCTACAAGTGTCCGTACTGCGAGTATGCGTCAAAATGGCGCAAAGACGTCGAGCGCCATGTTCAGACAATGCATCCAATAGAAGAAGTTAAAGTTATTGAAATTGGAAAAGCGAAAGAAGAAATAAAATTCGAGTGTACTTTTATCTGTCCTAGGGAAAATTGGTACGTTTATCCAGTGGCAGTCGAGAAGAAAACTTCAGCGTCGGTTAAGTACCCGTGTTTAAACCCGAATTGCAGGAGCACTTACGCGAATCAGTACCGGTTAAGAAACACGCACGAAGAAAACATCCTAATGGGGATAACGCTGTTATTGAGTTGTATAATACTACGGGGAAACACAGGAGTGGGAATGTTGGGAAGCCCGTTTATTATCAGTACTAATTGGTCGTTCAAGGAAAAAAGAGTGGGAAAATTTGGATTCGACTCGGGATTCTTCATGATGCACGAGACTTTTGGGCAGCTGGACTCCAGTGATAACTCCAGGTCCCAGAAGTACCCGTGTCCGAATCCGAATTGCTCGAGCCTGTTCAAGGAAAAGCGGCATTTAGGAACTCACATAAATTACCACTGCGGAAAGCCTCCTAGGTTTCAGTGTCCTTATTGCGAGTACATGTCTCACATGAAGTGCAACGTGAAGACTCACTGCAAGAAGCGACATTCTGACCAAGAGATCTGGGTCGTCGAGCGCTACAACTCAAGGATGCCTGGAAACTTTCCTTGTTTGAACGTCAGCTGCGGTAGCGCTTTTAAGGACGAGCTTCATCTGAAGAAACACATGAAGACCTGCGGAACTCCGCCGAGGTTCAAGTGCCCGTACTGCGATCATTGCTCCAAGTGGAGTTCTGACATGCGAAAACATGTTCAAGTTGTTCATCCTGGAAGCGAAGTTATTTATATTGATCAAACACTTTTTTGTCCAAATCCGAATTGCAAGCGAACTTTTTCAAATCTCATGAATATGAATGAACATGTTAAAATTGAGTGCAGTGGACCGACAAGGTACAAGTGCTCTAAATGCACCTTCCAGTCGATGACAATGAACCCTATGGTTATGCACATCAACTGGCAAAGTCCTCAAGCGACCCCAAAGCAGTTTCCTCGGAAATTACAACTAGAAAGCGGAGACGACTGTGTGATGACAATGGACGCTGTAGAGTTCCACTGCCCGAACAAGAACTGCACAAAAGTGTTCAACTGGCGCAGCAATTTAACCCGCCACATGAAGTACGAGTGCGGAAAATCGCCGCGCTTTAGATGCTCGCGCTGCGAGTACCAGTCGCCATTTAAGCAGCACGTGTTGCGCCACGCAAGTGCGAAACATCCTAATCAGCTGACAGAAGCAATCAATCAGCAGCAGAACCTGCCGAACAATCAACCGGTTCCTCAACCGGATCCAAGATTGGTTCCGCCGGAACTGATAAAGCCGGAACCTCCTGGCCAGTTCGTCTGTTCCAACCTGGACTGCAACGCCGCCTTTACCAATCTCTACGCGCTTGACTATCACACCGAGTTACATGTGCGACAGCCTCCGAAGTACCAGGTCTCCATGTTTTTACGATTTTATAATTATTCCGCCGGAACTGATAAAGCCGGAACCTCCTGGCCAGTTCGTCTGTTCCAACCTGGACTGCAACGCCGCCTTTACCAATCTCTACGCGCTGAACTATCACACGAGTTACATGTGCGACAAGCCTCCGAAGTACCAGGTCTCCATGTTTTACGTCTTGGAACAGGAGCTGCGCATGCGCAAGACATGTTCCCCTGCCCGAACACAAACTGCGCACGCGTATTCAAGTGGCGCAGCAATTTGACCAAGCACATAAACTTTGAGTGCGGAAAACCGCCGAGATTCATGTGTTCCAAGTGTTACTACCGTTCGCCGAGGAAACACGACGTTCTAAAGCACACCTCAAAGCAACACCCGAACGAAGTGGTCGCTCTGGTCGAGTTGTACAAGCCGGACAAGGCTAGAGGCCAGTTCCAGTGCCCGAACCTCAACTGCGGGAGCACTTTTAAGAAGCAGTACAGTCTAACTTACCATCTGAAGCACTTCTGCGATAAGCCTCCCAGGTTCAAGTGTCCCTACTGCTATCACGTCGGGAAGCTATCCACGAACATCAAGCAGCATATCCGGTGCATTCACCCTGGAAAAAGACTTAAGACTCCTGTGGTGAGATTGATCCGACTGGGCCTTATAGGCCCTCTAGAAACAGAGTCAGAGAAGAACGACAACCCGCGCTACTGGAAGTACGAGTGCCCGAACGTGAACTGCAGCGAGGTGTTCCGGACCAAGGCGAGCCTGACCAGGCACATGCGCAATACCTGCGGCAAGGCTGTGAACTTCGAGTGTCCGTACTGCGACTACTTATCCCCCGTGCGGCGACTGTTCATCCGCCACCTGAAGCGCCACGACCGACAGCAGCGCCCTGGCCCTCTGAGCAGAGACCGCACTTCGGGTCTGACCAAGAGACCGGGTCGCCCGCCGAAGCATCGGCTGGTTCCGGAGCCTCTTTTCGAACGGGCAGAACCCGCGGAACCCCAGTCCAGTTCTTCCGGTTCCTCCAAGGCTCCCGAGGTTCCTGGAACCGAAGAGGAACTGCAGAAGGACCCGCGCAAAAAACTGCGCTACTACGCTTGTCCTAATACCGATTGCTCCGGAAAATTCAGCAGCAAAAATGATCTTACTCAGCACTATCGCTTCAAGTGCGGAAAACCTCCGCGGTTCCGCTGCCCTTACTGCGAGTTCCGCGCTAAAACTGGGTTCGATGTCAGGCGCCATGTTAGAAATGTTCATCCTGATCACGATGTCTGGATTATTAAAGGCACCCAGACTCGGGACAGGAGGTACCAGTGCCCGAACAACAACTGCAGCAGTGTTTTTAAGCAGTACAGGAATTTCGTCACTCATCTTAATTACCAATGTGGCAAGCCGCCGAGATACAAGTGTTGTCCCTATTGCTCTCAAGAAGCGAAGTACAATAAAATAGTGAAGAAACATATAGAGAAAATTCATCCGCACTCTCAAGTTTTTGTTGTTGATAAATATTACGATGCTTGCAAATCTAAGTTTGGGGAAAATTTTGAGGAAAATTTGGGTGAAAATTATTTGGAAAATTCACTGGGAAATTTTGTATGTCCGAAGTTGAACTGTCAAAAGAGTTATAAGACTCAAGAAACTTTCGCGAAACCCATGACAAACGACTGCAAGAACGTCCCAAGATTCAAGTGCTCTAGATGCGCCTTTTACGCCTGGGAAACTTCAGTCATAGTTCGACACGCGAACACAATCCACTTGCACGAAGAAACTTTAGTGATCGACCAGTGGAATCAGTTCGCAAACACCGTGAAAAGGTTCACATGTCCCAACAAAAATTGTTCCAGCGTCTATAATTCGCAGTCCGAGTTAAACCGCCATATTAACAATTACTGCGGAAAGCCGCCTAAATTCAAGTGTCCGTTTTGCCCCTATCAGTCAAAATGGAGCAAAAATACCCGGCGACATGTTCATGCAAAGCATTCTGAAATGAATTGTCATTTCGGTGCCCAACCAAGAACTGCAACAAAATATTTAAAACACTAA
Protein Sequence: MEDDQQFCLRWNNHQTTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKTGSSGSTSSSKAETRSQKTVQPSAPSLDIPHSSSGLTIEKNNKVPRQSLAQASVGDLPEDSAISPNGRKRKRYRRRSLNDDNPIDNHETSNSSDMSHQPMNVPALGVAPMPVEKPEPNDTLIEPKSEYLDEAEDSVEDLTLDDEGMDDTMDDGNRAGPSHDPSHPGRGGARSCTRGNLVAGGETDTTSWASHFLDCKKVSIVSNCYINQRRESRPDVDVSALLKSLANKQGRKYSLDCVKKSLEAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWRQPASALAQEAAQAHRDSQVVHRISGAASSAGQLHPMTDYRRLACPSCGKSYKYRGGLSQIQTSLKIKPKQIKQDPLASSSGVTVKPVEYRCPNPNCNSVYKWKNNLTKHMNYECGKPPRYMCSHCNYQSPWKSYVLNHAASRHPTDQINVIELSITTKKQTGNFVCPNPHCTRVYKYKADLTRHINYQCQKPPRYKCPYCPKESNWSGGIKKHIRSFHPQQNLHLLSMFHCFDSLRSCQLTIFIGSTASGPQKDSSLRYSCPKCNRSYKNYGDMRKHLRFMCGQAPRFLCPYCNRCSNNSSNMYVHVRRAHKGRDVFLVDAYDSSRHTRKQGNKSPGSKYPCDKCNSVFNRKANLNFHIRWECGLPPRYKCPYCHLMSKKTTNIRKHIQRRHLGCEVYVHDVYCPEKFINITLGGVMTDEGLKFPCPKCGNMYSKTYHWKHVNYDCGVLPQLRCPHCPYAAKHTSNVKRHIRRIHPGSQVFVIDTRGHKLVGKAEVPVRPMHKRLQPERQPVLPQEIRLQPIAEVLLPLLRLSVPPCIQYACACPQKAPRDQNFKFYQPQRNARESRRGVHICPKCGGMFNWSWNLQQHLKYVCGQSPRFNCPYCSYRTRHTSNVRAHVRRQHPDKEIYISKTLCGSSEDLVASARAIPVLQSTPAAIAKVSSADKCPGSIAPTAPIALDTRLMFAHMSGKFTRVFKFMLLILLSFLRRRKRRLNAVQVKIKCPNCPSVYAHELTLKNHLKYECDFLNEVGEPVRYECLDNAPTKKFVCPNLCGSSFSHNYSLTRHLKYECGQEPRFKCPYCDLHYKRTSNVTQHIRTRHINCTTYAIDIIDNKIKFVMIKNKYHCQSCPRIFNSECSVKRHLKECGIEPRYQCAYCQYTGKRKFQITRHTKIKHKNQNLKIIDLFIIFAKNQKKKYERYQCEKPPRYKCPYCEYASKWRKDVERHVQTMHPIEEVKVIEIGKAKEEIKFECTFICPRENWYVYPVAVEKKTSASVKYPCLNPNCRSTYANQYRLRNTHEENILMGITLLLSCIILRGNTGVGMLGSPFIISTNWSFKEKRVGKFGFDSGFFMMHETFGQLDSSDNSRSQKYPCPNPNCSSLFKEKRHLGTHINYHCGKPPRFQCPYCEYMSHMKCNVKTHCKKRHSDQEIWVVERYNSRMPGNFPCLNVSCGSAFKDELHLKKHMKTCGTPPRFKCPYCDHCSKWSSDMRKHVQVVHPGSEVIYIDQTLFCPNPNCKRTFSNLMNMNEHVKIECSGPTRYKCSKCTFQSMTMNPMVMHINWQSPQATPKQFPRKLQLESGDDCVMTMDAVEFHCPNKNCTKVFNWRSNLTRHMKYECGKSPRFRCSRCEYQSPFKQHVLRHASAKHPNQLTEAINQQQNLPNNQPVPQPDPRLVPPELIKPEPPGQFVCSNLDCNAAFTNLYALDYHTELHVRQPPKYQVSMFLRFYNYSAGTDKAGTSWPVRLFQPGLQRRLYQSLRAELSHELHVRQASEVPGLHVLRLGTGAAHAQDMFPCPNTNCARVFKWRSNLTKHINFECGKPPRFMCSKCYYRSPRKHDVLKHTSKQHPNEVVALVELYKPDKARGQFQCPNLNCGSTFKKQYSLTYHLKHFCDKPPRFKCPYCYHVGKLSTNIKQHIRCIHPGKRLKTPVVRLIRLGLIGPLETESEKNDNPRYWKYECPNVNCSEVFRTKASLTRHMRNTCGKAVNFECPYCDYLSPVRRLFIRHLKRHDRQQRPGPLSRDRTSGLTKRPGRPPKHRLVPEPLFERAEPAEPQSSSSGSSKAPEVPGTEEELQKDPRKKLRYYACPNTDCSGKFSSKNDLTQHYRFKCGKPPRFRCPYCEFRAKTGFDVRRHVRNVHPDHDVWIIKGTQTRDRRYQCPNNNCSSVFKQYRNFVTHLNYQCGKPPRYKCCPYCSQEAKYNKIVKKHIEKIHPHSQVFVVDKYYDACKSKFGENFEENLGENYLENSLGNFVCPKLNCQKSYKTQETFAKPMTNDCKNVPRFKCSRCAFYAWETSVIVRHANTIHLHEETLVIDQWNQFANTVKRFTCPNKNCSSVYNSQSELNRHINNYCGKPPKFKCPFCPYQSKWSKNTRRHVHAKHSEMNCHFGAQPRTATKYLKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00378126;
90% Identity: iTF_00378126;
80% Identity: iTF_00378126;