Coce022815.1
Basic Information
- Insect
- Cosmorhoe ocellata
- Gene Symbol
- nfxl1
- Assembly
- GCA_963675405.1
- Location
- OY776267.1:7634912-7637383[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 3e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.014 2.1e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 20 3.1e-07 0.0046 17.7 15.9 3 19 186 202 185 202 0.95 4 20 2.7e-07 0.004 17.8 12.4 3 19 239 255 237 255 0.91 5 20 1.1 1.6e+04 -3.2 0.9 6 10 280 284 279 284 0.86 6 20 1.3e-09 2e-05 25.2 12.6 1 19 290 308 290 308 0.99 7 20 5.6e-06 0.083 13.6 19.2 3 19 345 361 337 361 0.87 8 20 2 3e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 20 5.9e-06 0.088 13.6 18.3 1 18 395 412 395 413 0.97 10 20 2.3e-08 0.00035 21.2 16.9 1 19 422 440 422 440 0.99 11 20 0.0002 3 8.6 6.4 9 19 488 498 486 498 0.89 12 20 0.00021 3.1 8.6 6.4 1 12 508 518 508 518 0.96 13 20 0.27 4.1e+03 -1.4 3.3 14 19 547 552 547 552 0.86 14 20 0.28 4.1e+03 -1.4 0.4 8 12 568 572 567 579 0.78 15 20 3.9e-06 0.058 14.1 3.9 1 11 588 598 588 599 0.97 16 20 0.41 6e+03 -1.9 1.5 14 18 612 616 612 617 0.86 17 20 0.027 4e+02 1.9 15.5 1 18 628 645 628 646 0.84 18 20 2 3e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 20 5.2e-06 0.077 13.7 13.4 1 18 687 705 687 706 0.89 20 20 1.5 2.2e+04 -3.7 1.3 6 10 736 740 735 740 0.87
Sequence Information
- Coding Sequence
- ATGGCGCGCCGCTACAGAGATGCAGCGGCAAAAATCCAGAAAAATGTGCAAAAACATCTGAAGGATATGAAGGACTTATCTTCTTCTGAAGATGAAGAGCCCTACGAGACCAGTGTCATCGAGGGGATGTTTCAGAGCTATTGGCGGGGGGGAGGGGACACCGAGATGCTGAACAGAACGAAGAATCTTCTAGAAGAAGCGATCAGCGGCCGCTCTATGACTTGCCTGATTTGTATCAGTTCTATCAAAAGGAACCATTCGGTCTGGACGTGTGACCACTGCTACTCGTACTTCCATCTCTCCTGCATCCAAAAATGGGGTAATGATAGCATCAGTTTACGCAGTATGGAATCTGAAGTTCCTCTAGGCATATATCAGCAACAGAAGATTGAATGGTGTTGTCCTAAATGCCGTAACTCGTACAGTAAGGAAGAAATACCTAGGAAGTACAGATGTTTTTGCAGCAAAGTTGATAATCCACCCGTTCACCCATGGCTGATCCCTCATACCTGCGGGGAAGTGTGCGAGAAGAGATTATCAACAGGAGACAACTGCAAACACAAATGTCTACTCCTGTGTCACCCTGGACCATGCCCGCCATGTCCTCAAACTGTCAATGGAATATGTTACTGTGGTAAGGAACATAAGAGAGTCAGATGCAGTGCAGCAAAGTGGTCCTGCGGCCAGCAGTGTCAAAAGACATTGCTGTGCCAGACACACAAGTGTGAGTTGTTATGCCATGAAGGAGAATGCTCCCCATGCACATACACAAGCATCCAATCTTGCCAATGTGGAGCTGAGGAAGCCAAAAGACCCTGTGTAGATCCCAATTGGCATTGCAAGAAGCCTTGTACGAAACCGTACTCATGTGGCTATCATAAATGTGAGAAGGTGTGCCACTCTGGTAGCTGTGAGGAATGTCCCAATTCTGGTATGAAGTCCTGCCCTTGTGGGGCTAATAAGCGCTTCATCCAGTGTCCTGACATCATGGAAACATGTATCGGAACCTGTGGCAAGAAGCATGAGGACTGTGTTCACAGTTGCCCTGAAAAATGCCACAGGGGACCCTGCCCGCCTTGCCAAGTTCTAATCCAAAAAAAGTGCCAATGCCTCTCTCACGTAAGGTCTTTACCATGCAGCAAGGAGTTCAAATGTGAAACAAAATGCCGAGGTACCAGACCTTGTGGAAAACATGGGTGCGCCAGGAAATGCTGCAACGGTAACTGCCCTCCATGTGAAAAGGTCTGCGATAAACCACTACAATGTGGCCGCCATAAGTGCACTACTATCTGCCACCATGGGCCATGCTACCCATGTCCACTGGAATCCAAAGTTACCTGCAAGTGTAAGGAGACTTATATCAGCGTCCCATGTGGTAGGGAGAGATACACAAAACCGCCAAAATGCCACCTACCTTGCAAGGTGAAGTACAAATGTGGCCATGTAGATGAAAATAAGCACTCCTGCCATTTTGGAGACTGTCCACCTTGCAAGGCTATTTGCCGCAAAACTTACCCAAAATGTGGTCATAACTGTAAGGCTTTGTGCCATGAGTTCAAAGCTGTGGTCTTCAAACAGGTCGAGAAACCAGCTACACCCTGGGAAGTGCAGCCACCAAAGACGAAAATTATGACCTTAGAATGCCCCCCTTGTAAAACACCAGTTTCTGTGATTTGCTTTGGGGAGCATGAGACAGACATCCAACCATGTCACACAGCATCTCGGAAACCTTGTGGTAGAAATTGTGGGAAACCTCTAGCTTGTGGTAACCACACCTGCGCTATGCTCTGTCACTTGTATAGCCAAAATCCTGAGTACCAAAATGTCCCCTATGATTGTAAGCCTTGTAATAGAGAGTGTTCGAAACCCCGTCCTGAAAAGTGCTCCCATAAGTGTTCTATAGGAGCTTGTCATCCTGGAAGCTGCCATCCTTGTGATGCCTTGGAGCGTATCCCTTGCCACTGTGGCATAACAGAGCTGTACCTACACTGTCGAGAGTATTGTTCAGCGACAGAAGAAATGCTATCATGCAAACAGCAATGCCCAAAGAACTTAGAATGCGGCCATCGCTGCAAAAAATCCTGCCATTCCGGAGCATGTGGTCAACAAGTCTGCACCAAGAAGACCAAGATACATTGCCCTTGTGGCAACTTGAGAAAAGATGCTCCATGCAATGCAGTCAGGAGTGGGGAAGCTACAGTGCAGTGTGAAGACACCTGTGAAGTCAAAAAAGCAGCAGCAAAACTGGAATGCGAAAGAGAACAACAGAGATTAAAGCTGTTAGAAGAGGAAAGAAATAGAAAAGAACTGGCCGAATATGAGTGGAAACTCAGCgggaaaaagaagaagtatAAGGAAAAGAAGGTGGTGATCGATAAAGATGAACGAAACTGGTTACACCGTCATTTGTTGCCGATTTTGTCAGTTTTTGTAGTAATTCTGGCAGctatttactatattttttatctgtag
- Protein Sequence
- MARRYRDAAAKIQKNVQKHLKDMKDLSSSEDEEPYETSVIEGMFQSYWRGGGDTEMLNRTKNLLEEAISGRSMTCLICISSIKRNHSVWTCDHCYSYFHLSCIQKWGNDSISLRSMESEVPLGIYQQQKIEWCCPKCRNSYSKEEIPRKYRCFCSKVDNPPVHPWLIPHTCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICYCGKEHKRVRCSAAKWSCGQQCQKTLLCQTHKCELLCHEGECSPCTYTSIQSCQCGAEEAKRPCVDPNWHCKKPCTKPYSCGYHKCEKVCHSGSCEECPNSGMKSCPCGANKRFIQCPDIMETCIGTCGKKHEDCVHSCPEKCHRGPCPPCQVLIQKKCQCLSHVRSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKVCDKPLQCGRHKCTTICHHGPCYPCPLESKVTCKCKETYISVPCGRERYTKPPKCHLPCKVKYKCGHVDENKHSCHFGDCPPCKAICRKTYPKCGHNCKALCHEFKAVVFKQVEKPATPWEVQPPKTKIMTLECPPCKTPVSVICFGEHETDIQPCHTASRKPCGRNCGKPLACGNHTCAMLCHLYSQNPEYQNVPYDCKPCNRECSKPRPEKCSHKCSIGACHPGSCHPCDALERIPCHCGITELYLHCREYCSATEEMLSCKQQCPKNLECGHRCKKSCHSGACGQQVCTKKTKIHCPCGNLRKDAPCNAVRSGEATVQCEDTCEVKKAAAKLECEREQQRLKLLEEERNRKELAEYEWKLSGKKKKYKEKKVVIDKDERNWLHRHLLPILSVFVVILAAIYYIFYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- -
- 80% Identity
- -