Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.19 6.4e+02 0.8 0.0 17 33 92 107 88 110 0.77

2 4 0.00049 1.6 9.1 0.1 23 35 125 137 119 138 0.87

3 4 0.0001 0.34 11.2 0.3 9 31 169 191 155 196 0.76

4 4 0.0074 24 5.3 0.3 23 34 269 280 261 282 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.19	6.4e+02	0.8	0.0	17	33	92	107	88	110	0.77
2	4	0.00049	1.6	9.1	0.1	23	35	125	137	119	138	0.87
3	4	0.0001	0.34	11.2	0.3	9	31	169	191	155	196	0.76
4	4	0.0074	24	5.3	0.3	23	34	269	280	261	282	0.83

Coding Sequence: ATGTCTCCTGCTGTATGCAGAGTGTGCTTAGTAAGtgaaatgaaaatgtacaGAATTGAAAACCAAGAAAtccaaaaattatatgaaaaaCTCACAAATACCAAGCTCAGCGCAGAAGATCAAATGCCCGAATCAGTATGTTACATTTGCTATTCACTGCTACAGAAGTGCTGTAGATTTTCTAACTTGGCTCATCAGTCAGAACAAATACTGAGAAACCAATTGAAGACGGACATAGATCAATTCGAAGATCACCTAAAAACTCATTCGGATGAAAAGCAATACATCTGTAGTCGATGCAGTCAAGTATTCAAAAAATCATCCCTACTAAGATACCATATGAAAAGTCACACCGGAATTAAACCTTATACATGCAATGCATGTGGTAAATCTTTTAAAGAACATTCACAATTGAAAACACACAGTGTTGTCCACAAAGATCGAAGACTGAGACCTTTCAAGTGTGATATATGTGGCAAAACATATCCTGTAAAAGGTTCTCTAACAATGCACATGCGATCTCATACCGGAGAGAGACCCTATTTATGTAACACTTGCGGCATGAAGTTTGCATATGTCGGCGTTTTGAAACAACACATCCGAAGACTGCACACTGAAGTTAAAGCATATGCCTGTAGCATTTGTTTCCTGTCGTTCAATCATGAAATTGGTCTCACAAGGCACATGAGAAATCACAATGAAGAAAGAAGACCATATTCTTGTGACCTATGCTCCAAAACATTCGGCACAGCTGGTAATTTAAAAGAACACGTCAGGGTTCACACCGGAGAAAGACCGTATTCATGCAACAGGTGCGGGAATACTTATAAACAATCAAAGCATTTGAGTGAACACCAGAAAACGATGAAATGCAGGACTTTAGCAGAGCAACAGGCAGAGAGTTAG
Protein Sequence: MSPAVCRVCLVSEMKMYRIENQEIQKLYEKLTNTKLSAEDQMPESVCYICYSLLQKCCRFSNLAHQSEQILRNQLKTDIDQFEDHLKTHSDEKQYICSRCSQVFKKSSLLRYHMKSHTGIKPYTCNACGKSFKEHSQLKTHSVVHKDRRLRPFKCDICGKTYPVKGSLTMHMRSHTGERPYLCNTCGMKFAYVGVLKQHIRRLHTEVKAYACSICFLSFNHEIGLTRHMRNHNEERRPYSCDLCSKTFGTAGNLKEHVRVHTGERPYSCNRCGNTYKQSKHLSEHQKTMKCRTLAEQQAES

Sequence clustering based on sequence similarity using MMseqs2