Basic Information

Insect: Cosmorhoe ocellata
Gene Symbol: -
Assembly: GCA_963675405.1
Location: OY776273.1:2778724-2792181[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.014 0.98 10.7 3.9 1 23 138 160 138 160 0.98

2 10 0.009 0.62 11.3 0.2 1 23 167 190 167 190 0.96

3 10 0.0012 0.084 14.1 5.9 1 23 221 244 221 244 0.98

4 10 0.0038 0.26 12.5 0.3 3 23 250 271 248 271 0.94

5 10 0.092 6.4 8.1 0.2 3 23 323 343 321 343 0.92

6 10 0.00048 0.033 15.3 0.1 2 23 364 386 363 386 0.94

7 10 0.00035 0.024 15.8 0.1 2 23 396 417 395 417 0.96

8 10 0.0057 0.39 11.9 2.2 1 23 1171 1193 1171 1193 0.95

9 10 9.7e-06 0.00067 20.7 2.1 1 23 1199 1221 1199 1221 0.96

10 10 2.4e-06 0.00016 22.6 0.9 1 23 1227 1250 1227 1250 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.014	0.98	10.7	3.9	1	23	138	160	138	160	0.98
2	10	0.009	0.62	11.3	0.2	1	23	167	190	167	190	0.96
3	10	0.0012	0.084	14.1	5.9	1	23	221	244	221	244	0.98
4	10	0.0038	0.26	12.5	0.3	3	23	250	271	248	271	0.94
5	10	0.092	6.4	8.1	0.2	3	23	323	343	321	343	0.92
6	10	0.00048	0.033	15.3	0.1	2	23	364	386	363	386	0.94
7	10	0.00035	0.024	15.8	0.1	2	23	396	417	395	417	0.96
8	10	0.0057	0.39	11.9	2.2	1	23	1171	1193	1171	1193	0.95
9	10	9.7e-06	0.00067	20.7	2.1	1	23	1199	1221	1199	1221	0.96
10	10	2.4e-06	0.00016	22.6	0.9	1	23	1227	1250	1227	1250	0.97

Sequence Information

Coding Sequence: ATGGTTGACCATACCCCATGTAGCTATACAATAACCCCGATAGAATCTATATCACTTAATGCATTGAACCAGTCTGAAGCAAAATCAAAGGATGCGCCCGAAACGGTGAAACAGGAGCTGAATGATAACAACATAGAAATTCATTGGAGTGATGGTGATAATGatgAAGCGGGAAGCAAAGTTGATTTGGACTATATAGATTTTTCAGTGTCTTCAGACTCTGAAGATAATATTCCACTAACAAAATTTAAGACAGCCAGGCGAATTGTCAAACGGGAAAAGATTAAACGAGAGAAACGGGGTTATCAGAGAGATGTCAAAATAAACGCAGAAGAAGTGGTACTTTCCAAAGAGCAGCAGATAGAGGCGGTAGTCGCGCGTTCCAAATCACTTAATTACCTCAACTCACCTTTCAAATGCCACCTGTGCTACAAGGGATTCGTTAATGAAGTCACTTACAGCAACCACACGCAGAAACATGACGAGAGCAGCGGTGCGTTCAAGTGCGATGTGTGCGCCCTGCGGTATCGCAGTGCGCGTCTACTTCGCACGCACGCCATGGTGTCGCACGCGAGATACTTCCAGTGCAACACGTGTGATCATATCTCGCATACCACGAATCAAGCGCGCGACCACGATAAATGGCATGAAGGTTACACATTCCAATGCAAACTTTGCAATAAGAAATTCAGGAAAAGGACCTCGTATCTCACTCACACTCGCAAGAATCACCAGACTGAGAGCATTTGTGAGCTCTGTGGATACAGTTTCGTCAGCAAAAATGGCCTGTTGCTACATAAGAGCAAATCTCACAAGCGGGACGCAAAGGAAGAGAAGCCACCAGTTCCCCCTGATGAGAGGTCCTGCGCGATTTGCAGGATCCAGTTCAAATGCTTGGAGGCCTATCACAGGCATCTGCTGAGCTCGGTCCGACACACGCAAGATTATACGTATAGTACTACCGAGTGTATAGTTTGCAAACAGACGTATCCGGACCACGAGTCCCTGGTGGAACACATCAAGATACACAAAAAAGAACTTCTACACCCAGCTCCGGTCATTGACCTCGGCTCCATACTGGCCCGGCTTCCTTGTGATGTGTGCGGCGTGTCATTCACGAGTCGGTCTCGCCTAGCTGCTCACGTGAGTCGCAAGCACCTCGGCGTGAGGTACGTCAAGCACGTGGTGTGCGAGCTGTGCGGACTGCAGTTCAAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCACACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCACACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCACACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCAGGCGTGCAGTAATAATGTGTGCGCAGTCGGCGGCGCAGCTGCGCGGGCACCAGCGCGCGCACGCGGGGCTGCGGCCGCACGCCTGCGCGCGCTGCCCGCGCCGCTTCGCGCACGCGCACGCGCTGCGCCTGCACGTGCGCGCGCACGCCGGCGAGCGCCCGCACGCCTGCCTCACGTGCGACAAGCGCTTCACGCAGAAGGCGGCGCTCAACCGGCACTATcggGTCCACACCGGAGCGAAGCCCTATACCTGTCAAGTCTGCTCAAAATCCTTCAGTCAGTCAAACTCTCTGAAAATCCACATTCAGTCGGTACACCTCAAGATGCCTCCGCACCGGAAACGGAAACGGACGTCGGCAAAAAACGATAGTTTAGATATCAAAGCAAATTCTGATGATGAAGTCAAAATGAgtcattaa
Protein Sequence: MVDHTPCSYTITPIESISLNALNQSEAKSKDAPETVKQELNDNNIEIHWSDGDNDEAGSKVDLDYIDFSVSSDSEDNIPLTKFKTARRIVKREKIKREKRGYQRDVKINAEEVVLSKEQQIEAVVARSKSLNYLNSPFKCHLCYKGFVNEVTYSNHTQKHDESSGAFKCDVCALRYRSARLLRTHAMVSHARYFQCNTCDHISHTTNQARDHDKWHEGYTFQCKLCNKKFRKRTSYLTHTRKNHQTESICELCGYSFVSKNGLLLHKSKSHKRDAKEEKPPVPPDERSCAICRIQFKCLEAYHRHLLSSVRHTQDYTYSTTECIVCKQTYPDHESLVEHIKIHKKELLHPAPVIDLGSILARLPCDVCGVSFTSRSRLAAHVSRKHLGVRYVKHVVCELCGLQFKSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRRAVIMCAQSAAQLRGHQRAHAGLRPHACARCPRRFAHAHALRLHVRAHAGERPHACLTCDKRFTQKAALNRHYRVHTGAKPYTCQVCSKSFSQSNSLKIHIQSVHLKMPPHRKRKRTSAKNDSLDIKANSDDEVKMSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -