Coce025808.1
Basic Information
- Insect
- Cosmorhoe ocellata
- Gene Symbol
- -
- Assembly
- GCA_963675405.1
- Location
- OY776273.1:1181199-1214243[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.21 15 7.0 1.6 1 23 146 168 146 168 0.97 2 21 0.0061 0.42 11.9 0.4 1 19 977 995 977 997 0.96 3 21 0.4 28 6.1 1.0 1 23 1004 1026 1004 1026 0.97 4 21 0.31 21 6.5 4.9 5 23 1034 1053 1031 1053 0.94 5 21 1.3 93 4.5 0.3 1 23 1057 1080 1057 1080 0.94 6 21 3 2e+02 3.4 0.0 2 20 1093 1111 1092 1113 0.88 7 21 0.0044 0.31 12.3 0.3 3 23 1127 1148 1126 1148 0.96 8 21 0.069 4.8 8.5 0.3 1 23 1245 1267 1245 1267 0.92 9 21 0.0026 0.18 13.0 6.4 1 23 1273 1295 1273 1295 0.96 10 21 4.4e-06 0.00031 21.7 1.2 2 23 1301 1322 1301 1322 0.97 11 21 0.69 48 5.4 0.2 1 21 1328 1348 1328 1349 0.95 12 21 0.045 3.1 9.1 0.5 2 23 1568 1589 1567 1589 0.95 13 21 0.26 18 6.7 0.6 1 23 1596 1619 1596 1619 0.89 14 21 0.061 4.2 8.7 0.0 2 23 1688 1710 1687 1710 0.95 15 21 0.11 7.3 8.0 2.1 1 20 1716 1735 1716 1740 0.93 16 21 0.00011 0.0074 17.4 1.4 2 23 1768 1790 1768 1790 0.97 17 21 0.14 9.4 7.6 1.0 1 20 1796 1815 1796 1820 0.92 18 21 0.008 0.55 11.5 1.5 3 23 1893 1913 1891 1913 0.93 19 21 0.0017 0.12 13.6 0.8 1 23 1919 1941 1919 1941 0.96 20 21 3.6e-06 0.00025 22.0 1.1 1 23 1946 1968 1946 1968 0.97 21 21 0.019 1.3 10.3 0.2 1 23 1974 1997 1974 1997 0.96
Sequence Information
- Coding Sequence
- ATGCTGAACCCAAATTTTACAGCAGAAAGACTGCCAATAGAATCTCTACACAAACTCTTAAGAAACACAAGTACTGAGTATGAATATGACACATCAAAACATATAGAGCCGCATCATTATAACGATAGTAATGATAATGACAATGATATAAAAGAGGAGATCAAAGATGAATTACCCGATCATTATGATAATGACAATGAAGATATCgggaaagtttttaagaatataGTTAAAAATAAGAGAACAAAGAAGGAAAAAGTCGATCCCGAAGTTggtaaagTTCCCAAAAAGTATAAATTGCGCGGTGAGATAGCGAAGAGAAGTGAATTCACACAGTTCGAGTCAGTGTTTGACATCGAGCTGTTTGCGACATACGCAGATGCCCGTAAGGAGCTGCTGGCACGGCGACTGTCGGAGCCCTATCTATCAGCTCAGCACAGATGTGAAATCTGTTTCACCGTGTACAAGAACGACGGCTTACTGCAGTTCCATATGAAGTGGCATGATCCGGCTGTAACAAGCGGTAGAATGATATGTAAATTCGTTGAGACCTCAAAATCTCTCACCAGTGGCTCCAAGCAGCTGTCCTGCATGCAGCGGCCACACCCCGGAAACCGCGTCGGCTCGTGGGCTAAACCTGACACAAGTCACCAAGTATTCCCAAAGAGGGTTGACGTCAGGCAGGCGGCCGGTCGTAAAACACCTAGCCAAAACTCGTACAACATGGATCACAGAAATAAAAGGAATTGCGATAATGCTAGGGCGTACCCCCGAGGCGACGCGCAGGCGCAGCACCCGGCGCCTGTGGGAAATGGACTAGGGTTGTTGCACCAGGGACGGGTGCAACGTAAGACGCGAGTCCGGGAAGTACGAATGAGGTTTGCAAGTTGGAATGTAGGTACGATgactggaagaggaagagagcTAGCGGATGTTTTAGAAAGACGACGAATAAATGTAGCGTGTTTGCAAGAGACGAAGTGGAAGGGATCGAAAGCAAGAGAAATCGGGGTgggttataaattttattattgtggaAGTGATGGTAGGAGGAATGGTGTAGGAATTGTTCTAGATAGTAAgctgaaaaaatgtgtgacggaTGTTAAGAGGATGAATGATAGATTGATAGTTGTAAAAGTATTGTTAGAAGATTTAGTCCTAAACATAGTAAGTGTGTATGCACCGCAGACTGGGTGTGATGAtagagtgaaagagaagttttGGGAGGAGTTTGATTCAATGATAATGAGTATACCAGAGAGTGAGCACCTATATATTGGGGGGGATTTTAATGGACATGTGGGAAGAATGAATGAAGGATATGAAAGAGTGCATGGAGGATGGGGATTTGGTAATAAAAACCAAGATGGTGAAGCCCTGCTCCAGGCTGCTTTAGCATTCGACCTGGCTATTGctaacacattttttgaaaaacctGAGGAGCATCTTATTACTTTCAAAAGTGGTAATCACAAAACTCAAATTGATTACTTCCTCCTTAGGAGAGATAGCATCAGGTCCATTAAAAACTGCAAAGTAATACCTGGAGAGGGCTTAGTATCTCAGCATCGATTGCTTTTACTCGAACTAAGATTCGAAGTCAAAAGCAATAAAAACAAGCCAAAGCCCCCACCAAAGATTAAATGGTATTTAATAGGAAAGGATGAGTATGCTAGAGAATTCCAAAAGCGAGTAGTTGACAGAATGATAGAAATGAAGGATATGTGTGAATTATCTGTGAATGAATGTTGGAATGAAATGGCTAACTGTATGAGAAGTGCGGCGAAGGATGTTTTTGGAGAAACGAAAGGaaaaggtaaaatagataGAGATACTTGGTGGTGGAATGAAGAGGTACAAAAGGTTctgaaagaaaagaagaatgCCTTTAAGGAATGGAAAAGGGATGATAATGGAGATGATATTATAAAAGAGGGTAAAAGAATGGTATATATGGAGTGTAAAAGAAAAGCTAAAAAAGCTGTTGCAATTGCAAGGGCCAAGGTACAGGATAAATTGTACCAAGCCTTGGAAAAACCTAGTGGACAAAAAGACCTGTACCGATTAGCTAAAGAAAGAGAGAAGAATACTAGAGATATTATGCAcgttaaatgtataaaagatgaTGGAGGAAAGGTTTTGACGAATGACGATGacataaaagagcgctggaagggatattttgaaaagttaaTGAATGAGGAGAATGTTTGGAGTGGAGTGTTAGAAAATGTACCAGTAAACATGGGTTTGGTGAGAGATGTGAGTACGAGTGAAGTAAAAAAGGCTGTGCAAGATATGAAGAATGGAAAAGCGGTTGGACCAGATGGCATACCAGTGGAAGTATGGAAGTTACTGAGTGCGGATGGATGGAAGTGGCTGAGTTTATTCTTCAATAAGTTGTTGCAAGAGGAGGCGATCCCGGACGAATGGTGCAACAGTTCGCTAGTGCCcatctttaaaaacaagggtgatgtacaggactgcaacaactaccgaggaataaagctcatgtcACATAGTATGAAAATTTGGGAGAAAGTAATAGCGAGACGAATGAGAGAAGAGAGTGAGATATCACAGAGCCAGTTCGGGTTTATGCCAGGGCGAGGGACAACGGATGCCATATTCGCACTTCGCCAGCTGTGCGAAAAACACAGAAGTGCACACACGAACCTACATATGGTGTTCGTTGACCTGGAAAAGGCATACGACCGAGTACCCCGGGAGGTTCTGTGGTGGGCTTTGAAAGAGAAAGGAGTGCCAGGAAAGTACCTGCAGCTTATTCGGGCCATGTACAGTCAAGCTAGTACACATGTTAGGTCCGAAGCTGGCGTTACCGATGAGTtcaatgtggctgtaggcttgcaccagggatcggctctaagcccttatctgttcctcctgCTATCAGCGGACTTGCCTCACGAGTGTGATGTATGCAGCATGCGGTTTGCGACGCGCAGCACGCTGTTGAAACACAAGCCAAACTGCCACCGCGGCAAGTTCGCCTGTAAGATGTGCTCGCTCGTCACTTACCAACGGCAGGCGATGAAGGCCCATTTTCAAAAACACCAAGGGAAGATATACAAATGCCATTGCGATAGAGTCTTCAAACACATATCGTCGTACATGACGCACCGGCGCAACGTGCACGCGTCGCGTCACGTGTGCGGCGCGTGCGCACGCACCTTCGTGTCCGAGCTCGGCCTCAGGGACCACACCCTCAAGATGCATCCGgcGGAGTGTAAAGTGGACTGTGAAGGCACGGTGCGGTGCGAGCCGTGCGGCCTCACGTTCACCAGTCGACAGGTGTACACTGTGCACGTGTTGAACACGGATGTACACAAGGACATAGCTAGCGAGCTTGTAGCGTGCTCAGTCTGCGGTCTGACATTTGAAGATATAACACAATTGAAAGAGCACAAGAGGCAAAACCATGCGCGTACGCAGAACAACGCTCAGAGACATGTCAAGAAGAATCCTTCGAGGAAAGATGGTCCGAAGAAAGAAGAGAGCATTAATGACGTCATCGAGTGTAAGCTGACTGTCTACTCCGCAGTACGTCTACTAGGGGTCTACTGTAGACCCCTGAAGCACCGTGAAACATACATCCTGACGTCATACATCCAGTGCGGGCTGTCGGGCGCGGGCAGCGCGTGGCTGTACCAGCACTACCGACGCGAGCACCCGGCGGAGCGGTACGAGGCGCCGCGAGGCAGGCGCGAGTTCCTCTGCGACCAGTGCGGACAGGGCTTCTATAAAAAGTTGCAGTTAGAAGAACATGGATACGTGCATTCGGGACTGAAACCCCATCGCTGTGAGACATGCCACAAGGCGTTCCGGACCAAGATGAGTCTCAAGAACCACAGCGAGCGGCACGCGCCGCCATCGCGCGAGTGCACGCACTGCGGGAAGAAATTTAACAGTGCCGCCAACCTCAGCAATCATATACGGgGTCACACCGGCGCGCGTCGCTTCGTGTGCATGTACTGCGCTAAGGGGTTCCTGCACCGCGCGGCGCTGCGCGAGCACACGCGCGGAGTCGATGTGCATCCATCTCTAAAGTTCTGCCCAATATGTGAACACCAGCTGAAAAAATCCTACAACTTTCGCCAGAAATGCAGGAGAGCCAATGCAGTCCTTAAACAATGGAGCATAACAAATATTCCAGAAAGTCTAGAAAATTTACAAGAACTGTTCCCACCATTAATCACATTGCAAAACAGAACTGATGCTCTCAATGTGATAGAAATCATACACGTAGACGACACACACACAATCATAAAACTTGAGAATGAAGATGGAAAAGCTGAAGACAGTGTAGATGTCAGTGAAAAGAATAGTGCTAAAAGAAAACAGCTTAAACAAAACCAATTGAAATTAAAAGACAGAGTATTAAATCTCCTCAAGTCCGGGGAGTTTCAGGATCTCGGAGAGAATGTCACTATGAATGAGGAAGTGTTTTTGAAGATGTTTGAAAGGTGTGATAAAACAGGGTTTCGGAGTATACTGCCTCTTAAACCAGgATCTATAGAAGAACTGCAAAAAATAAGAAAGTTTCTCCTATATCTACTGAAACACAACAATTCCAAGTATGAAGACATATTCCATGTGGAAGTCCTCGACACAGATGCTAAGAAACTTGAGGAGTTCAATAGAAGGAAGTTCAGTCAAGAGTATAAAGAGGCTAGGTTAAAGTGTGAAAGATGTTACAAGGTGTTTGATGTCCAGAGCCTATTGGATTACCATAACCGGTGGCATGAGCCAAGCACAGGCGGCCACGTGTGCGACATGTGCGCAATGCGTTTCGCAAGCCGAAAGGCATTGGCGCAACACGACAAGACCAACCACTGTTGCGTTTACCGCTGCAAGCTGTGCCCTCTCCATACATACAATCCCAACAAAAACACTTTGAACAACCACCGCCGGCAAGTGCACAAGACGTCGCATATCTGCTCCCTGTGCGCGCGCAGCTTCGTCTCGGAAAAGGGATTGCACTTCCACAAGCGGCTGAAGCATAAAgaTGAGATTGAGACGAAGTCTGAATACGCTGTTTCGTGCGATAAGTGCGACGCAGTCCTGACGTCACCGGAAGTGCTACTGACACACATCCGGCAAGTGCACGAAAGTGCAGAAACtCACAAATGCTTCCATTGCAAGGAGATATTTGGTTCAATTGAAGAGCTGAAGAGGCATAAAGTTGAACAAGACCACCAAAGGCCGCCCAAACCGCTCAAGTCTACCAAATCCAACAACAGTAAGACTGACGTAGCTCAGAGTGATAGAGAAAAGCCTACGTGCGGAGAGTGTGACAGGTCATTCAACTCGCGGAAAAACTACCTGAGACATGTCAACACCAATCACAAAATCAAGAGgatCCACAAATGCGGCTTCTGCCAGGCCAAGTTCACGTCCGCTGAGGACCTGGACTCCCACAGAACGGCCTCCAGCCACCACCGGAAAGTCCGCTATGTGAAAAAGCAGCGGAACAAACCGTCCGCTGACAAGCGGCTCAAATGCAATGATCCTGACAAACCTTTTGAGAAATGTCAGCTGTGCGATGAAATGATCTCTACCGCGCGAACTAATACGATGTACCAGCACTTCCAAGCTGCGCACCCGGACACGCCGTACGCGTCGGTGTACTCGCAGCCTCACAACAGGCATCTCTGCGAGCAGTGTGGGAAGACCTTTAAGGACCTAACATTCTTCATCGACCACGCGAACCTGCACACGGGGGCGAAGCCCTACGCGTGCGCGCAGTGCCCGCGCGCGTACAGCACGCGCCGGCACCTGCGCCTGCACGCGGAGCGGCACGGCCCGCCGCGCCACCAGTGCCGGGACTGCGGGAAGATGTTCAATAGTGCCGGCAATCTGTTCGCACATAGACGGGGTCACATCGGCGACCGCCGCTTCAAGTGCGAGATCTGCGCCAAGGGTTTCCTGCACCAGGCGGCGCTGAACGAGCACGTGCGCGGCGTGCACAACCACATGCGGCGCGCGCGGAAGTGTAGGGAGAAGTGA
- Protein Sequence
- MLNPNFTAERLPIESLHKLLRNTSTEYEYDTSKHIEPHHYNDSNDNDNDIKEEIKDELPDHYDNDNEDIGKVFKNIVKNKRTKKEKVDPEVGKVPKKYKLRGEIAKRSEFTQFESVFDIELFATYADARKELLARRLSEPYLSAQHRCEICFTVYKNDGLLQFHMKWHDPAVTSGRMICKFVETSKSLTSGSKQLSCMQRPHPGNRVGSWAKPDTSHQVFPKRVDVRQAAGRKTPSQNSYNMDHRNKRNCDNARAYPRGDAQAQHPAPVGNGLGLLHQGRVQRKTRVREVRMRFASWNVGTMTGRGRELADVLERRRINVACLQETKWKGSKAREIGVGYKFYYCGSDGRRNGVGIVLDSKLKKCVTDVKRMNDRLIVVKVLLEDLVLNIVSVYAPQTGCDDRVKEKFWEEFDSMIMSIPESEHLYIGGDFNGHVGRMNEGYERVHGGWGFGNKNQDGEALLQAALAFDLAIANTFFEKPEEHLITFKSGNHKTQIDYFLLRRDSIRSIKNCKVIPGEGLVSQHRLLLLELRFEVKSNKNKPKPPPKIKWYLIGKDEYAREFQKRVVDRMIEMKDMCELSVNECWNEMANCMRSAAKDVFGETKGKGKIDRDTWWWNEEVQKVLKEKKNAFKEWKRDDNGDDIIKEGKRMVYMECKRKAKKAVAIARAKVQDKLYQALEKPSGQKDLYRLAKEREKNTRDIMHVKCIKDDGGKVLTNDDDIKERWKGYFEKLMNEENVWSGVLENVPVNMGLVRDVSTSEVKKAVQDMKNGKAVGPDGIPVEVWKLLSADGWKWLSLFFNKLLQEEAIPDEWCNSSLVPIFKNKGDVQDCNNYRGIKLMSHSMKIWEKVIARRMREESEISQSQFGFMPGRGTTDAIFALRQLCEKHRSAHTNLHMVFVDLEKAYDRVPREVLWWALKEKGVPGKYLQLIRAMYSQASTHVRSEAGVTDEFNVAVGLHQGSALSPYLFLLLSADLPHECDVCSMRFATRSTLLKHKPNCHRGKFACKMCSLVTYQRQAMKAHFQKHQGKIYKCHCDRVFKHISSYMTHRRNVHASRHVCGACARTFVSELGLRDHTLKMHPAECKVDCEGTVRCEPCGLTFTSRQVYTVHVLNTDVHKDIASELVACSVCGLTFEDITQLKEHKRQNHARTQNNAQRHVKKNPSRKDGPKKEESINDVIECKLTVYSAVRLLGVYCRPLKHRETYILTSYIQCGLSGAGSAWLYQHYRREHPAERYEAPRGRREFLCDQCGQGFYKKLQLEEHGYVHSGLKPHRCETCHKAFRTKMSLKNHSERHAPPSRECTHCGKKFNSAANLSNHIRGHTGARRFVCMYCAKGFLHRAALREHTRGVDVHPSLKFCPICEHQLKKSYNFRQKCRRANAVLKQWSITNIPESLENLQELFPPLITLQNRTDALNVIEIIHVDDTHTIIKLENEDGKAEDSVDVSEKNSAKRKQLKQNQLKLKDRVLNLLKSGEFQDLGENVTMNEEVFLKMFERCDKTGFRSILPLKPGSIEELQKIRKFLLYLLKHNNSKYEDIFHVEVLDTDAKKLEEFNRRKFSQEYKEARLKCERCYKVFDVQSLLDYHNRWHEPSTGGHVCDMCAMRFASRKALAQHDKTNHCCVYRCKLCPLHTYNPNKNTLNNHRRQVHKTSHICSLCARSFVSEKGLHFHKRLKHKDEIETKSEYAVSCDKCDAVLTSPEVLLTHIRQVHESAETHKCFHCKEIFGSIEELKRHKVEQDHQRPPKPLKSTKSNNSKTDVAQSDREKPTCGECDRSFNSRKNYLRHVNTNHKIKRIHKCGFCQAKFTSAEDLDSHRTASSHHRKVRYVKKQRNKPSADKRLKCNDPDKPFEKCQLCDEMISTARTNTMYQHFQAAHPDTPYASVYSQPHNRHLCEQCGKTFKDLTFFIDHANLHTGAKPYACAQCPRAYSTRRHLRLHAERHGPPRHQCRDCGKMFNSAGNLFAHRRGHIGDRRFKCEICAKGFLHQAALNEHVRGVHNHMRRARKCREK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -