Coce026338.1
Basic Information
- Insect
- Cosmorhoe ocellata
- Gene Symbol
- -
- Assembly
- GCA_963675405.1
- Location
- OY776274.1:538890-541343[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.036 48 4.8 2.3 6 38 45 73 42 77 0.82 2 10 0.012 16 6.3 2.3 6 39 73 101 68 108 0.75 3 10 0.0037 5 7.9 1.1 14 38 107 128 96 133 0.81 4 10 0.15 2e+02 2.8 1.4 18 38 139 156 129 163 0.79 5 10 0.0091 12 6.7 1.0 12 40 165 190 160 193 0.74 6 10 0.023 31 5.4 0.4 3 39 185 217 183 224 0.86 7 10 0.0066 8.8 7.1 1.8 18 31 227 240 223 249 0.79 8 10 0.97 1.3e+03 0.2 2.4 14 38 251 272 240 276 0.77 9 10 0.0004 0.54 11.0 1.0 16 41 281 303 271 305 0.88 10 10 0.0001 0.14 12.9 1.3 14 44 307 334 303 334 0.93
Sequence Information
- Coding Sequence
- ATGGAAAAACCTAATGATGGAGTCACATCTGTAGCTGTTAAGAAAGAACCTTTGGATGACCAGGAACAGtGCAACGGTGAAAGTGAACCATTACCATCGAATAACTTTATAGATACAAATGCAATATCGGAGCATTTCCTTGCATTCTCATCAAGGAACAAGCACAACTGTAAAATTTGCTTGAAATCTTTCGCAAACAACGCTAATCTACAACGCCATTCACTTATCCATACCCGGATCAAATATAAATGTAGTGTCTGTTCTAAACAATACTCCGCGGAGGAACAACTTAAGAAACACATGCTAGTACACATCCCTAACAGAATGTTCCCATGTGAGATATGTGATAAGAAGTTCAAAACCTCATCAAATCTGTTGCAGCATAAGAGAGTGCACACCACAGACCGGCCACACCAATGTGGGATTTGCAAAAAAGGTTTTGCTATCCGAGCAAATTTGGTCCGGCACCAAACCACAATAAGATGTAAACCGCTGACCGAGCAACCTTTAATATGTAAAGTGTGTAACAAAGTGTTTGAGAAATCATTTCTACTAAAATCTCACTTAAGAAAACATGATACGGATAAACCTTTTGTTTGTGATATGTGCGGATTagattttaaatacaaaagtgCTATTATAAGACATATGTCATGGCACTCTGGGTCCAGACCGTACAAATGCAATTATTGTTCGAAGACTTTCACTCACTCCGGACTGGTGAAGCCACACTTAAGAACACACACCGGTGAGAAACCATACCAATGCAGTATATGCCTTAAACTCTTCACACATAAGCATAATATGGAACGACATAAAGTGAATCATGGGAAAATTAAGCGTTTAGTATGTGATATATGTAACAAGAAATTTCCAAGGGAATCTCGCTTGATTTATCACATGAAGACGCATATAGGTGAGAAATTTTTCGATTGTGGGAAATGTGATAAGAAATTCACTCATAAATCTAATGTTATTCGACATTATGAGAGAAAACATCCGGGATTTAAATATAAGGGGAAAGATACTGATGCCTCTGTGGCGATGAGAGTCTGGGAGAGAGTTAAGGATATGTTGAAACCGCATTACGATATTTACAACCAGCCTGAAGAGATATTGGGTTAA
- Protein Sequence
- MEKPNDGVTSVAVKKEPLDDQEQCNGESEPLPSNNFIDTNAISEHFLAFSSRNKHNCKICLKSFANNANLQRHSLIHTRIKYKCSVCSKQYSAEEQLKKHMLVHIPNRMFPCEICDKKFKTSSNLLQHKRVHTTDRPHQCGICKKGFAIRANLVRHQTTIRCKPLTEQPLICKVCNKVFEKSFLLKSHLRKHDTDKPFVCDMCGLDFKYKSAIIRHMSWHSGSRPYKCNYCSKTFTHSGLVKPHLRTHTGEKPYQCSICLKLFTHKHNMERHKVNHGKIKRLVCDICNKKFPRESRLIYHMKTHIGEKFFDCGKCDKKFTHKSNVIRHYERKHPGFKYKGKDTDASVAMRVWERVKDMLKPHYDIYNQPEEILG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00377326;
- 90% Identity
- iTF_00377326;
- 80% Identity
- iTF_00377326;