Coce010485.1
Basic Information
- Insect
- Cosmorhoe ocellata
- Gene Symbol
- -
- Assembly
- GCA_963675405.1
- Location
- OY776253.1:2911722-2912612[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-11 8.5e-08 32.5 0.0 4 35 14 46 11 48 0.92
Sequence Information
- Coding Sequence
- ATGGaggaaaagaaaaagaaaggaAACTGGGACCAAAAAAGTTTACAAAAAGCGATAGACAAGGTTTTGTCTAGAGAAATGAGTCTGAGAGAAGCTTCGTTGCGCTATGACATACCGAAAAGTACTCTGCATGATAAAACATCGTTATTGAACCGTGGACAAGAAGTGACGTTGGCAAAACCAAAGATCGGTAGATTTACTTGCACCTTTACACCCGAATACGAAGAAACTTTGGTTAAACATGTTAAGGATTTATCCAACAGATGTTTACCACTGATGAAAAAAGAGTTTCTGAAGCTAGCGTTTGACTTAGCTGAAACTTTGAAGATCCCTCATCGATTCAACAAAGAACTGTCCAACAATTTAGTCTCAGAAGAACCCACCGACCCTCCTAAAGGATTTACCAGGGAACAAACAATCAGCAGCCCGAAGCCATCGACTAGCTTTGATCTAGATGTGGCACAGATTGTCCATAAATTGTCGCCACTGCCAGATGCTGCTAAAAAACGATCAGCTGCTCGAAAGAGAAAATGTGAGAAAAGTGAAATCCTAACTTCATCGCCATACAAAGTTGCAGTTGAAGAAAAAGAGAATGAAAAGAACGCTAAGgacaaaaagaaagaaatgaGAAATTTGTTGACAACAGCGATAGAAGAGAAAGGGAAATCTACAAAAGGCGTAAAGACGAAAGGAAAAAGTGGAGAAAAAGCAAAGAAAAAGCAATCGCTAActgaaatacataataaaaaaaccactTGCGTAGTGTGTTTAGAAGATCATGACGAGGACTGGATACAATGCTCCAGCTGCCGTGGGTGGGCTCATGAAGCTTGTGCCGATATGCCTGAATGTTCAGAAGCCTACGTATGCGATCTATGCATGATTTTTTAA
- Protein Sequence
- MEEKKKKGNWDQKSLQKAIDKVLSREMSLREASLRYDIPKSTLHDKTSLLNRGQEVTLAKPKIGRFTCTFTPEYEETLVKHVKDLSNRCLPLMKKEFLKLAFDLAETLKIPHRFNKELSNNLVSEEPTDPPKGFTREQTISSPKPSTSFDLDVAQIVHKLSPLPDAAKKRSAARKRKCEKSEILTSSPYKVAVEEKENEKNAKDKKKEMRNLLTTAIEEKGKSTKGVKTKGKSGEKAKKKQSLTEIHNKKTTCVVCLEDHDEDWIQCSSCRGWAHEACADMPECSEAYVCDLCMIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00377040;
- 90% Identity
- iTF_00377040;
- 80% Identity
- -