Csor031748.1
Basic Information
- Insect
- Cosmopolites sordidus
- Gene Symbol
- Zfhx4
- Assembly
- GCA_031761425.1
- Location
- JARFXV010001016.1:78214-121073[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.64 1.2e+02 4.9 0.1 1 23 90 113 90 113 0.90 2 15 0.029 5.6 9.1 0.5 2 23 129 151 128 151 0.93 3 15 1.1 2.2e+02 4.1 2.6 2 21 230 249 230 253 0.87 4 15 0.12 23 7.1 1.5 3 23 267 290 265 290 0.87 5 15 0.0039 0.76 11.8 1.6 1 23 308 330 308 330 0.97 6 15 0.00085 0.16 13.9 0.7 2 23 337 359 336 359 0.94 7 15 0.00047 0.09 14.7 3.0 1 23 466 490 466 490 0.92 8 15 0.0067 1.3 11.1 0.6 1 22 510 531 510 534 0.89 9 15 0.0013 0.26 13.3 0.2 1 23 581 605 581 605 0.93 10 15 0.001 0.19 13.7 0.0 2 21 669 688 668 689 0.93 11 15 0.68 1.3e+02 4.8 1.4 2 19 811 828 810 833 0.90 12 15 0.00014 0.028 16.3 2.5 1 23 1405 1427 1405 1427 0.99 13 15 0.00098 0.19 13.7 0.3 1 23 1523 1545 1523 1545 0.98 14 15 0.0078 1.5 10.9 0.4 2 23 1701 1723 1700 1723 0.96 15 15 0.45 87 5.3 3.6 3 23 1984 2006 1983 2006 0.90
Sequence Information
- Coding Sequence
- ATGGCTAATCTCAAGATGAAATGTTCGGGAGTAAGAAGTCCTCCGATCGGATCTCCGGGGAGGACGGTTTTGAGAGTTACCAATAAAGACATAAACAGGGAAACAACTAACTTATTCAGAACACAACTTAGAATAGGAACCTGGAATGTGCAAAATCGCCGTTGTAGCAGCAACTCCGAAATGTCCCAAATGGAGACTCAAAATCAAATGAAATCCGAAGCTGGTGATCTAGAAGAATCCAGTCAGGTTGAATCGAATTCAGCACCTCATATTTGTCCTTATTGTGACTATGCCAGTGATAGTGAAATGAGAATTCAAGCTCACATGCTTGCCCAGCATGGTTCCAGTACGCAACCTGAAACGCCTCAACAAGAACCAGCTCTTCATTGTCCTTTATGTCAAGAAATTTCCAAAGATCGAACTACTTTGGAACGACACGTCATGCAGATTCATTCCGTCAATAGCGAAGGTCTCCAGAGATTATTAATGCTTGTGGATCAAAGTCATTGGCTGAACCAATCGAGGACGTCGACTCCAAATAATACGAACGTTCCAAATCAAATATCCCCAACATCGGTTTCGTCCAAAGACTCATCAAAACTAGAGAAAAGTGATAGCGGATATCCCGATGAAAATCCTGAATTAATGTCGTCGATTAATGATGACAATAACGATGCTGAAAGCGAGCGGTGCGGAACCTGTTTCAAAACGTTCAAGAACATCGATGAATTATGTTTCCATCAAAATGAAACTGGACATTTGGAGATCAAGCAAACTCCGAGCGGTCCTGGATATCTGTGCTGGAAGAAAGGATGTAATCAGTTTTTTCCCACAGCTCACACGTTACAAACTCATTTTAAAGAGGTCCATGCTAAAAATTCCATCGCTAACATGTCAGTGAGCGAGAAACACGTGTACAAGTACCGATGCAACCAATGCTCCTTGGCTTTCAAGACTTTGGAAAAGTTACAGCTCCATTCTCAATATCACATGATAAGGGATGCAACTAAATGTGTACTTTGTGGACGAAGCTTCCGATCGCTGGTAGCTTTGCATAAACACGTGGAGAGTGTCCATTCTGAGTTGACCGACGAAGAACTGAACGCTTATAAACAAAGTTTAATGAACAATCCGTTGTTGCTTGCTGGTCTTCAAGGTCAGATCTTGGACAGTTCCACCAATGACATTTTGAAGAAGGAAAGCTTGAGAGGAGAGGAAAATGAAAGTACTGAATGTGATGACAGTAAGGAACTAAGCCAATCACTGGACGATAGTATACAAAATGACGGAGAGAACTCTGATGACAGTATAATTTATAAAGATCAACAGTTTTTAGAAGACTATCTGAACAGTCAGGCTATGGCTGAAGATAGTTACAATGATCCTACGAGAAAGTATAAGTGTCATAGATGCAGAGTTGCTTTTACTCGACAAAGTTACCTGACTGCTCACAACAAGACTTTATTGCATAGAAAAGGAGAAAAATTAAGCTACCCAATGGAGAAATATCTTGATCCGAACCGACCGTATAAATGCGACGTTTGCAAAGAGAGTTTCACCCAGAAAAATATACTGTTGGTACATTACAACTCTGTAAGTCATTTACACAAACTTAAGAGAGCTATGCAGGAACAagctaataataataacaacactCCGGTCTCGACCAGTTTGGGTTTAACACAAGGCCTATCATTAACACCGAAAAGCTCTAATATTGACGACGATGACAAAAAGAAGTATCGTTGTAACATCTGCAAGGTGGCCTATACTCAAGGCAGCACGCTTGATATTCATATGAGAAGCGTTTTACACCAAACCCGAGCGAGTAAGTTGCAAGATCTCGCTATGGCCGGTCAGATTGATCTGACGAAACCGCTGATAGAACAGCCGGATGCCGGGCAGTCTCCGAAACAAACTTCGCCGTCGCCCGGAGGTGGGGATGCGCCAAAACAACCCTGCCCCACCCCTCCGTCGCCAGGTATGGCAGGTAGTCTGGGGTTGAGTTGTCCCAAGTGCGGTGCGATCTTCGTTAGCGCGGAACAGTTGAACGCTCACCAGCTGTACTGTATATTCGCCGCTCCTATGGCAATATTTCACGGCGATGACCCAGATCAAGATCCAACAGTACGCGCTATGTCCAATAAAAAGGGTTCACCCATCTATAAACATCTTCTCGAAGGATACGGATTTGATTTAGTGATGCAGTATAATGAGAGCCATCAAAGAAGACAACGACAAGCGGAAAAAGAGAAAGCGGAGGCAGAGGAGAAGCTGAAGGAACAAGCGGCTGCTGCTGCCGAAGAAGGTGCCGTTGAACTGACGATGGAAACAACCGAGCTACAAGAGATTAAGGACGAGACGCCTGTAGCTGAAGTGGAGAAAACGTGCGAAGAAGATGCCGCTAGTTTGCCTGAAGTGAGTAAATCTACGTGCCAAACGTGCAATAAAGAGTTTTCAAGTGTGTGGGTGTTAAAAAGCCACTGCGAGGAAGTGCATAAAGACTTGGTGCCGTTAGAATATCTCGAGAAATACGCacaacaactcaaaaacgaaATCGAAAAGAAAACTGTGGTGGTAACCGCTGCCACTAGCTCCACGACAAATACCACGTCTCGTGTTACGACGCCTACGACTCACACGGTTGACACTCCGAACCCAGAGACCGATTCCACTCCTGATAAAGACGTTGACGAATCCAAGGAAGCTCTTCACGTTAAACTAAATCTTCAAACACCACCAGAAGCGACTTCGACAGCTCCCAGCACACCGACAAGCAGCACCACGCCGGCTAGCTCCACAGACTCCCTGTCTGCGAATCTACAAGCGATGCTCGCACAAACGATGGCTCAAAATCCGATGGCTTTAGCTCAGCAGATGTCCGAAATGCAGGCAGCTCTCAGTGTGATGCATTTACAACAGATGAATTTCAATCCTGTGGTGCAAATGATGGGGATGGGTTTGCCTTTAGGATTGAATGCTTTAGCGGCCATGAATCTGCAACCACCTTTGGTGCCGTTGATGATGCCCCCACCACCTTTCGATCCTATGACGCAGTTTGGACCGCAGGACCAGCAGACCATGCTCGCAAAACAACAAGCCGCCATCATGCAACAACAAGCTGTGGCCAATGCCGCCAATCAAAAACGGGCTCGCACGAGAATCACCGACGATCAACTGAAGATATTGCGTTCTCATTTCGACATTAATAATTCACCTTCCGAAGATCAGATTCACGAAATGGCCAATCAGAGTGGGCTCCCGCCGAAAGTGATCAAACACTGGTTCAGAAACACCTTGTTCAAGGAGAGACAAAGAAATAAAGACAGTCCTTATAACTTTAACAATCCCCCATCCACGACTTTGAATTTGGAGGAGTACGAGAAAACTGGCGAGGCGAAAGTGCTTCCCTTGAATAATTCATCGGGAAGTAGCTCGGATGAAGCAAATAAGAGTAAAGAAATGTGTTCGCCTGCACCAACATGCGTACCTCAACATGCGGAAATCAAACAGGAAATTAAGGAAGAACCTGCTGACGAACACATTcagcaacaaaaacaaaatgaatcTTTGGAAGAAAAacctcaaaatatatttaacttgcCAGTCAACTTGCAACCTCCTCAAAGTCCTGCTACATCGATAGCTTCAACAGAAAGCATGAACGTTTCATCACAACCATCCACTCCGAATAATCTCACCTTGACCTCCATCATCGCCTCTCAGCTGGGAGACACTCTCACCACCAGTACTCCCACCTTAAACATGGCTGCAATGCAAGCCCATCACGGTCTCTCGAATCCGATGCTTCCTCCACCTAAATTAAACCAGCAAAACTTTCCCAACCCTAACAACCTCCAGGGAATGTTACCTCTGACTCCAAACCGATGTCTCAGTCCGACTAGAGACTACTCCAATCCAGGAAGTCAAGGTTCTAGTGGTTCTACAGGTAAACGTGCCAATAGGACACGATTCACCGACTACCAGATCAAAGTACTGCAAGAATTCTTTGAAAACAACGCTTATCCCAAAGACGACGATCTGGAATATCTATCAAAGCTCTTGAATTTGAGCCCTAGAGTGATTGTTGTGTGGTTTCAAAACGCTAGGCAGAAGGCTCGAAAAGTATATGAAAATCAACCAGCCGTTGATCCTGCTCCGGGAATCGATGAAGCAGGAGCCAATCGTTTTCAAAGAACTCCCGGCTTAAACTATCAGTGCAAAAAGTGTTTGTTGGTTTTCCAACGTTATTATGAATTGATCAGGCATCAAAAAACTCATTGTTTCAAGGAAGAAGATGCTAAAAGAAGTGCACAAGCACAAGCTGCTGCAGCTCAAATTGCTGCTGTTCTCAGTTCTGAAGACTCCAACTCCAGCACCACGGTGGAACAAGGGCAACAACCGATACAGACTCAACCACAAAATCTAGTGAATCCTCAAACTCCAAACTTGAGTCAGGCTCTCAGTCCGAGTCAACCGAACGCCCCAACAACGCCTACTCCAAATCAAACGGTTGGCAACTTCCCCAGTTCCTCACCTACACCCTCCGAAACCAAAGAGGGGACTTTTCAGTGTGACAAATGTAATTTGGTGTTTCCCCGATTTGAACTGTGGAGGGAGCACCAGCTCGTCCACTTGATGAATCCGAATTTGTTTCCATCTTATCCTCCGGACAGTCCGTTTGGGATCCTGCAGCAGCACGCTCAGCTGCAACAGTTAAACGCTAATCTGGGCGAAGTATCTAAGCAACAACCAACAAGTCAAAATACTCAAGTACAACCTCCAAATGTTCCACATCCACTGATAAATATGCTGAACAATGTTACCGGTCAGAAACGCAAAGCGGAAGAGTTTGGGGATGGTGAAAGCGACACCAGTGATCAGCCCAAAGATAAACGCTTAAGAACGACAATTTTACCGGAACAGTTGGATtatctataccaaaaatatCAAATCGAGAGTAACCCGTCTCGAAAAATGTTGGAAAACATCGCTCGTGAGGTTGGTCTGAAAAAACGCGTTGTCCAAGTGTGGTTTCAAAATACCAGAGCTAGAGAGAGGAAGGGTCAGTTCAGGGCACACACACAAGTCATCAATAAGAGATGTCCGTTTTGTccagctctgttcaaagtgaaAAGTGCTTTGGAATCCCACTTGACAACCAAGCACGCCGACCAATGCGCTAGAGGAGAGATCAACATTGATGCTCTCCCTGATGAAGAAGTGAGCTTGGAGAGTTCTCCGAGTTTATCGAGCGGAAATGATGGCAAATATCAACAGCAAAATCCGAACTTGATGCCTCCGTTATTTCCTTCGTTGCATCCAGACATGGAATCCtcgattaaaaaatattacgaagAAAGCATGAAGCGATACATCAATGAGCTTCAGCAGCACGCATCTTCTTCTAACGGAGATAAATGCGAGATTAAAAGTGAAAAGGGGGAAAGTGGGGAGATCCCTTTGGACCTATCCAAACCGGTTGACCTTTCGAGACCAATGAAAGTCTCCATGGAGCATGAGAGGAACTTATGCGATCCTGGGCCATTAACTGATTTAAGCGAACGTTCTTTATGTGACGAACGCAGTGACTCTATGTCTGAGACCACAGAATACATTGATGATGATAGTAATCCTACTTCTCCAGCCAGTAGTACTCAGAGCAATACCCAAAGACATCTGAACGCATCAGGGGGCTCCCAAGGTGGAACCAAACGTTTTAGAACCCAAATGAGTCCCACCCAAGTGAAAATAATGAAGAGTCTGTTCGGAGATTACAAAACGCCGACGATGGCGGAATGTGAAAGTTTGGGACGTGAAATAGGTCTTCCTAAAAGGGTGGTGCAGGTTTGGTTTCAAAACGCTCGCGCCAAAGAAAAGAAGGGTAAGATGGCCTTACAAAAGGTCCTGGGGCAGCCGGAAAACGACACACCCTCTCTACCCGAAGACTGCAAGTTCTGTAACTTCAAGTACTCGCATAAATACTCCGTTCAAGACCACATTTTTACCAAAAGTCACATAGCTAACGTTCGCATGCATCTGGAGGCACAGGGTTCCAAAGATAACACAGAGAGCGCTGGTGAATTCCAAGTCCCTCCTCTTCCGAGTGGGTCTGGTTCACTACCGACTTCCGAGTCCCAACAAAATCAGTCAGCACCGGGTCAAGGCCAAATGAACAACAACGCCCATCTTCAGCTTCTGCAGATGGCAGGCATGCAAATGCCCGGTCCCAAAACCCAGGAGCAGGAGGAGAGTCCAGAAAGTTTGTTCCAGCAGCTCTACGCAATGGGTAACAACGCGAATTTCGGCGTCCAGAATCAGTATGTGCACCACGCCATGTTCGGAGCCAACGCAAAGAACATGGGAAACAACGAGTTCAGAACTCCCGAGAGGGAAACCCAGTATCAGATGGAGACAAGACATGGAAGAAAAGATAAGAACAGTGAATGTAGGGGGGTGGAGAGAACAGATCGTATATTGGAGGAGAAGGAGGAAACAGTTGAGAAGGCAAAACATCACCAACAATTATGA
- Protein Sequence
- MANLKMKCSGVRSPPIGSPGRTVLRVTNKDINRETTNLFRTQLRIGTWNVQNRRCSSNSEMSQMETQNQMKSEAGDLEESSQVESNSAPHICPYCDYASDSEMRIQAHMLAQHGSSTQPETPQQEPALHCPLCQEISKDRTTLERHVMQIHSVNSEGLQRLLMLVDQSHWLNQSRTSTPNNTNVPNQISPTSVSSKDSSKLEKSDSGYPDENPELMSSINDDNNDAESERCGTCFKTFKNIDELCFHQNETGHLEIKQTPSGPGYLCWKKGCNQFFPTAHTLQTHFKEVHAKNSIANMSVSEKHVYKYRCNQCSLAFKTLEKLQLHSQYHMIRDATKCVLCGRSFRSLVALHKHVESVHSELTDEELNAYKQSLMNNPLLLAGLQGQILDSSTNDILKKESLRGEENESTECDDSKELSQSLDDSIQNDGENSDDSIIYKDQQFLEDYLNSQAMAEDSYNDPTRKYKCHRCRVAFTRQSYLTAHNKTLLHRKGEKLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQANNNNNTPVSTSLGLTQGLSLTPKSSNIDDDDKKKYRCNICKVAYTQGSTLDIHMRSVLHQTRASKLQDLAMAGQIDLTKPLIEQPDAGQSPKQTSPSPGGGDAPKQPCPTPPSPGMAGSLGLSCPKCGAIFVSAEQLNAHQLYCIFAAPMAIFHGDDPDQDPTVRAMSNKKGSPIYKHLLEGYGFDLVMQYNESHQRRQRQAEKEKAEAEEKLKEQAAAAAEEGAVELTMETTELQEIKDETPVAEVEKTCEEDAASLPEVSKSTCQTCNKEFSSVWVLKSHCEEVHKDLVPLEYLEKYAQQLKNEIEKKTVVVTAATSSTTNTTSRVTTPTTHTVDTPNPETDSTPDKDVDESKEALHVKLNLQTPPEATSTAPSTPTSSTTPASSTDSLSANLQAMLAQTMAQNPMALAQQMSEMQAALSVMHLQQMNFNPVVQMMGMGLPLGLNALAAMNLQPPLVPLMMPPPPFDPMTQFGPQDQQTMLAKQQAAIMQQQAVANAANQKRARTRITDDQLKILRSHFDINNSPSEDQIHEMANQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVLPLNNSSGSSSDEANKSKEMCSPAPTCVPQHAEIKQEIKEEPADEHIQQQKQNESLEEKPQNIFNLPVNLQPPQSPATSIASTESMNVSSQPSTPNNLTLTSIIASQLGDTLTTSTPTLNMAAMQAHHGLSNPMLPPPKLNQQNFPNPNNLQGMLPLTPNRCLSPTRDYSNPGSQGSSGSTGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLNLSPRVIVVWFQNARQKARKVYENQPAVDPAPGIDEAGANRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQIAAVLSSEDSNSSTTVEQGQQPIQTQPQNLVNPQTPNLSQALSPSQPNAPTTPTPNQTVGNFPSSSPTPSETKEGTFQCDKCNLVFPRFELWREHQLVHLMNPNLFPSYPPDSPFGILQQHAQLQQLNANLGEVSKQQPTSQNTQVQPPNVPHPLINMLNNVTGQKRKAEEFGDGESDTSDQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLENIAREVGLKKRVVQVWFQNTRARERKGQFRAHTQVINKRCPFCPALFKVKSALESHLTTKHADQCARGEINIDALPDEEVSLESSPSLSSGNDGKYQQQNPNLMPPLFPSLHPDMESSIKKYYEESMKRYINELQQHASSSNGDKCEIKSEKGESGEIPLDLSKPVDLSRPMKVSMEHERNLCDPGPLTDLSERSLCDERSDSMSETTEYIDDDSNPTSPASSTQSNTQRHLNASGGSQGGTKRFRTQMSPTQVKIMKSLFGDYKTPTMAECESLGREIGLPKRVVQVWFQNARAKEKKGKMALQKVLGQPENDTPSLPEDCKFCNFKYSHKYSVQDHIFTKSHIANVRMHLEAQGSKDNTESAGEFQVPPLPSGSGSLPTSESQQNQSAPGQGQMNNNAHLQLLQMAGMQMPGPKTQEQEESPESLFQQLYAMGNNANFGVQNQYVHHAMFGANAKNMGNNEFRTPERETQYQMETRHGRKDKNSECRGVERTDRILEEKEETVEKAKHHQQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00196690;
- 90% Identity
- iTF_00376075;
- 80% Identity
- iTF_00376075;