Basic Information

Insect: Cosmopolites sordidus
Gene Symbol: RREB1_1
Assembly: GCA_031761425.1
Location: JARFXV010000712.1:27277-32399[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4.7e-05 0.0092 17.9 1.0 1 23 56 78 56 78 0.99

2 16 2.1e-05 0.0041 19.0 1.2 1 23 91 113 91 113 0.98

3 16 0.00028 0.055 15.4 6.6 1 23 119 141 119 141 0.98

4 16 0.32 62 5.8 0.2 1 23 201 225 201 225 0.86

5 16 0.094 18 7.5 0.9 2 23 231 253 231 253 0.91

6 16 0.07 13 7.9 0.6 1 21 299 319 299 320 0.92

7 16 0.066 13 8.0 0.1 1 23 447 469 447 469 0.96

8 16 3.1e-05 0.006 18.4 0.8 1 23 478 500 478 500 0.98

9 16 0.0013 0.25 13.3 2.3 1 23 506 529 506 529 0.97

10 16 0.00045 0.087 14.8 3.0 1 23 911 934 911 934 0.97

11 16 0.00045 0.087 14.8 0.4 2 23 1145 1166 1144 1166 0.97

12 16 0.11 22 7.2 6.3 1 23 1172 1195 1172 1195 0.97

13 16 0.039 7.5 8.7 1.1 1 20 1225 1245 1225 1246 0.94

14 16 0.18 34 6.6 0.5 1 23 1312 1335 1312 1335 0.95

15 16 0.011 2.2 10.4 0.2 3 23 1383 1403 1381 1403 0.94

16 16 0.014 2.7 10.1 6.0 1 23 1409 1431 1409 1431 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4.7e-05	0.0092	17.9	1.0	1	23	56	78	56	78	0.99
2	16	2.1e-05	0.0041	19.0	1.2	1	23	91	113	91	113	0.98
3	16	0.00028	0.055	15.4	6.6	1	23	119	141	119	141	0.98
4	16	0.32	62	5.8	0.2	1	23	201	225	201	225	0.86
5	16	0.094	18	7.5	0.9	2	23	231	253	231	253	0.91
6	16	0.07	13	7.9	0.6	1	21	299	319	299	320	0.92
7	16	0.066	13	8.0	0.1	1	23	447	469	447	469	0.96
8	16	3.1e-05	0.006	18.4	0.8	1	23	478	500	478	500	0.98
9	16	0.0013	0.25	13.3	2.3	1	23	506	529	506	529	0.97
10	16	0.00045	0.087	14.8	3.0	1	23	911	934	911	934	0.97
11	16	0.00045	0.087	14.8	0.4	2	23	1145	1166	1144	1166	0.97
12	16	0.11	22	7.2	6.3	1	23	1172	1195	1172	1195	0.97
13	16	0.039	7.5	8.7	1.1	1	20	1225	1245	1225	1246	0.94
14	16	0.18	34	6.6	0.5	1	23	1312	1335	1312	1335	0.95
15	16	0.011	2.2	10.4	0.2	3	23	1383	1403	1381	1403	0.94
16	16	0.014	2.7	10.1	6.0	1	23	1409	1431	1409	1431	0.98

Sequence Information

Coding Sequence: ATGGAAGAATCGTTTGAACGAGAACACTTGACGAAACAATCAGCTGGTGACCTCACATGCCAAAACGATTCTGGAGTTTATTCAGCAACATCGAACACCACATTCGAACAGTCAGCGAATTGCGATAGCGATAACCAAAGCGATCGTAGCAGTCCGGAGCGGAGATACGTGTGTCCGATCTGCGACGAGATGTTAACGTCTCAACATAAATTTACGCTGCACATCCGCTCGCACAACAACCAAAACGAAGATCAGGATAGCGAGAAGGGATACACGTGCAAAATATGCCATAAAGTGCTCAGTTCTAGTTCTAGTTTAGATCGGCACGTCCTGGTGCACAGCGGAGAACGACCCTTTCACTGTAAATTCTGCGGTGACACGTTTACTACCAACGGAAATATGCACAGACACATGAGAACTCACTCAATCAAAACGGATAATTACGAATCTGACGGCAGTGATTCAGGAAGCTCGAAAAGCATCGAATTCAACAATAACAAAGTGGACTCCAAACACGGCACTAAGAGGAAACTGGAATCGTTCGAAGAAGATAGCAACAAGAAACGCGATGTGAATAGTCTGGACGACACCGTTCAGTCCTTCAAATGTCCTGTATGTGAAAGATCCGATTTCACTTCAATCAATAACCTGGAAACACATCTGGAGGACAATCACCCCGACTACCCAGCCAAATGCAACATTTGCAACCAGATATTCCCCAACAACAACATTCTAATCCACCACAAAACCATGGTTCATGAACTCAACAGTACAAAACAAACTGTAGTAGGATTCAAAGATCTCACCTTCGTAGAATTCTCCAGCGAGAAATTTCCCCACATAGCCAGGCGTGAATGCGAATTAAATGTACACAAAGCAACAGGAAATATTCGCTTTCAATGCACGAATTGCACCAAGGCGTTTCCTTGCTCCAACGCGTTGGAAATTCACGAGAGAAGCTGTCTGGACCCTCCCGCCGGTTTGAACTTgtccaaaaacaacaacgtgtCTGAAGATGAAATTAGACGACAGGAATTCTTTTCTCGGTTAAATTTACAAGACAACTCTCCTGAAAAGAAGGTGTCTTTGGTGCAAGCTTTGAGAGAGGCCACACCTAACAATCTCAGAGAACAACCAGTCAAAATAGACAGTCCCAAAGATCTAGCTGATATCCAATCGATATTGTCCAATATAAACGTGCAACAGCTGCAGTCTAAACACAATGAAATGAAAATCTCGCCTCCAAAGCCTACATTAGACatagattataaaaatgaaCAGGAGGAAGAATCTCAGGATTTCGTGTTGGAgtttagaaaaatgaaattaCGTGGAGAATTTCCGTGTAGGTTATGTACAGCGGTGTTTCCAAATCTGAGAGCTTTGAAAGGGCACAACAGAGCTCATTTGAATGGAAATAACAACGGGACTTATTTTTGCAATATGTGCCCTCATTCATCCATTGACAAGGCTGCCTTGATTCGACATATGAGGACCCACAATGGCGACAGACCTTATGAATGTGCTCTCTGCAATTACGCCTTCACCACCAAAGCAAACTGCGAGCGACACTTGCGGAATCGTCACTCAAAAACGACCAGAGAAGACGTGAAGAAATCTATTATCTACCATCCTTCGGAAGATCCAACCAACGAAGATCTCAACAAGCTCACTATGGAAAAAGACCCAAAGAAACACTATAGATCTTGCTCTCCTATTGATTCCGTTGATCTAGCTTCAGAAAAGATACACTGCTCCACACCAAAGATCCCCCTGAAAACGGACGTAACTTTCCCCATTCCAGATTTACAAACGTTGAAACCTACGAAAACTTTTCCGAATATCGAATTTCTCCGCAACGAAAACCTCAAATCGCTCAAAGAAGGTCGATTTTTAAATGGGATCTCACCCTTCTTTTCTCCTGCCTTTAATTTAACTCCGAAACTTCCCGAGAATCCTCCCACATCGAAAATTCAAGTGAAACCCTTCGAGGCCCTGAAGGATAAAAACTGCACTTTTGATGCACAGTCGGACGATGAATATTACGAGGAAGATGAAAGTGAACCATCTATGGATGTAGCTTTGGATTTGAGCAAGAAGAAAATGGATGAAGATCAGAAACGGTTTGAGGAAGAAGAACCTCAAGATCTGACCAAAAAATTGTCTGCTTCACCGACTATGCCTGACGTACCTGCTCCTATAAATGATCTGTTTATTCATCCAAAAGTAAATTCCGCTGCTTTATACGCCTCCCAAGTTATCCAGCTGTATCAAAATAGTTTAGCCTGGCCAACATTTCCTGTCAATCCTTTCTTCCTACAAGCCCTACCAAACTTACCGCGAACCCCTCAGGATTTGAAAGAGCAAATGCAGAGATTCCAACTCGCAGGAGGCTCAATGATATCTAAGGAGCCCAAAAATCTTACACCACCACAAACTCAAGCGCTTCTAAATCCCGGATTCAATGGTTTCAAAGTGAATACTGAATCAAAGCCAGAGTTGAAACTTGAAAACGCATTCCCACAAGCCTCTACCAAGAAGACCGACGTGGCGAAACCGCTAAGCTTAAAAACAGAAGGCGGTTTCAGTGACAATGCTTCCAAAATACACAGTCCCGTGCAACAGCTCAAACCAGACATGATCCAATCACCCAATTCGGTGAAGATGGTAATCAAAAACGGCGTTCTTATGCCCAAACAGAAGCAGAGAAGATACAGAACCGAACGTCCGTTTACCTGCGAACATTGCTCGGCTAGATTCACGCTCAGGTCGAACATGGAGAGGCACATCAAGCAGCAACATCCACAATTTTGGTCACAAAGGCAGAGAAGCAACATAGGTCAGCCGGGAAGAAAACCTCAGAGCATGATGTTAAAAACGAATTATGACATGACATTGCCCAGTTACGAGCTCCAGATGCACGAGTTCGATGAAACCAAAGAGCACAGAAATGACAAGCTAAAATTCGCGCTTTTAGCCCAACAACTCCAAGCTAACAAGGTGATACAGGACATCAAAAAGGAAGATGACGAAGACTGTGCATTGATCATTGACGAAAACGACAAATCTGAGGAAACACTGACGCCAAAGACAGAGTACAAGACTCCCATCCTTGAAGACAAATTGAGAGAGTATCAGGACACATCTAGACAGGAGAAGAACATGAAAAACGAAGAGGATTTGGTGCCGGTGTCCAGGTTGTTGGACAATGCCAATCAACAGCAGTTCAAAGAGTACTTCAAGCGCGATGGCGAAGAACACGAAGTGTGTGTCGGTAGCGAAGAAGATGAGGAAGGTTTAGTTGCCAGTGGGAGTACCAGTGAGGAAAATGTATCAGGAACAGATGAAAATAGaTCTGAATCAGAAACAGTAACAAACATCGCTGTACCGACTAAAAAGAAGTCTGCCTACTCCCTGGCACCAAACAGAGTCAGCTGTCCTTACTGCAGTCGAAAATTCCCATGGACTTCTTCTCTGCGCCGACATATCCTGACCCATACAGGACAAAAACCGTTTAAGTGCAGTCACTGTCCTCTGCTCTTCACCACCAAGTCCAACTGTGACCGTCACTTGTTGCGCAAACACGGAAATTCAGCCACAACCATAGTCACAGGAGAAGCCTCAAATCCCAACGGCATCAACTACCTAATGCGTAACGTCCCTGAACGTCCCTTTAAATGTTCCAGCTGTCCGAGCAGCACGTTTTCCACCTACTCCAACTTAAAGAAGCACATTAGCTGCAAACATTCCACTAATGCTCAAGGTGATGATATTAAAGCTCAAGGTTACGAAGCGGGAAGCTCTGAGGATGAAAAGGGAAATCAAGCAGATGGAAAAAACGACTGGGAGAATCAGATTGCATTTTCTAAATTCCCCACTACTAACAACCTGGAAATACACGCCAATTCTCAAGTGAACAACTCGGATTTACCTTTTAAATGTCACCTGTGCGAAGGATCATTCGCTGAAAGGAACGAGGCTCTAGAACACATCAGGGACAAGCATGCTAGCGAGTATGATCTTTTGATGTCCAAAAATGCTCTGGACGCTAACGCTACTACCCCAGATGACACCGTCCATCATCACGACGAAGACGACAGCGACATTCGCGGAAAATTTCCCGACTACTCCAATCGGAAGGTCATCTGCGCCTGGTGCATGCGTCGTTTCTGGTCGGCAGAGGATCTGCGCAGACACATGCGCACCCACACCGGGGAAAGACCGTTCAGCTGCGACATCTGCCGGCGTAGATTCACATTAAAACACAGCATGCTCCGACACAAGAAAAAACACCTAACGAGCAACAGTTTCGAACAGGACACCACTCACAGCGACGAAGATGGTGGAAGTAACGTATCCCAATCTTGCGTTAAAAGTGATAAAGATGAATTCTCGACAAAGCGGAGTGAgaaaacagatgaatccgatACTCAGGAGGGTGGGGGTGATCTAATAAGTAACCTGTTGGGTTTAAGGGATCGAAGTATAATCGACAAGGTGCTAGACGCTTCAGCTGATGATGCAGCTGAAATGTTAGGAGTCAAAAATGGAATCAAAGAGTAA
Protein Sequence: MEESFEREHLTKQSAGDLTCQNDSGVYSATSNTTFEQSANCDSDNQSDRSSPERRYVCPICDEMLTSQHKFTLHIRSHNNQNEDQDSEKGYTCKICHKVLSSSSSLDRHVLVHSGERPFHCKFCGDTFTTNGNMHRHMRTHSIKTDNYESDGSDSGSSKSIEFNNNKVDSKHGTKRKLESFEEDSNKKRDVNSLDDTVQSFKCPVCERSDFTSINNLETHLEDNHPDYPAKCNICNQIFPNNNILIHHKTMVHELNSTKQTVVGFKDLTFVEFSSEKFPHIARRECELNVHKATGNIRFQCTNCTKAFPCSNALEIHERSCLDPPAGLNLSKNNNVSEDEIRRQEFFSRLNLQDNSPEKKVSLVQALREATPNNLREQPVKIDSPKDLADIQSILSNINVQQLQSKHNEMKISPPKPTLDIDYKNEQEEESQDFVLEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYFCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHSKTTREDVKKSIIYHPSEDPTNEDLNKLTMEKDPKKHYRSCSPIDSVDLASEKIHCSTPKIPLKTDVTFPIPDLQTLKPTKTFPNIEFLRNENLKSLKEGRFLNGISPFFSPAFNLTPKLPENPPTSKIQVKPFEALKDKNCTFDAQSDDEYYEEDESEPSMDVALDLSKKKMDEDQKRFEEEEPQDLTKKLSASPTMPDVPAPINDLFIHPKVNSAALYASQVIQLYQNSLAWPTFPVNPFFLQALPNLPRTPQDLKEQMQRFQLAGGSMISKEPKNLTPPQTQALLNPGFNGFKVNTESKPELKLENAFPQASTKKTDVAKPLSLKTEGGFSDNASKIHSPVQQLKPDMIQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNIGQPGRKPQSMMLKTNYDMTLPSYELQMHEFDETKEHRNDKLKFALLAQQLQANKVIQDIKKEDDEDCALIIDENDKSEETLTPKTEYKTPILEDKLREYQDTSRQEKNMKNEEDLVPVSRLLDNANQQQFKEYFKRDGEEHEVCVGSEEDEEGLVASGSTSEENVSGTDENRSESETVTNIAVPTKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTIVTGEASNPNGINYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKGNQADGKNDWENQIAFSKFPTTNNLEIHANSQVNNSDLPFKCHLCEGSFAERNEALEHIRDKHASEYDLLMSKNALDANATTPDDTVHHHDEDDSDIRGKFPDYSNRKVICAWCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHKKKHLTSNSFEQDTTHSDEDGGSNVSQSCVKSDKDEFSTKRSEKTDESDTQEGGGDLISNLLGLRDRSIIDKVLDASADDAAEMLGVKNGIKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -