Basic Information

Insect: Cosmopolites sordidus
Gene Symbol: -
Assembly: GCA_031761425.1
Location: JARFXV010000918.1:29835-43771[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00021 0.041 15.8 6.2 1 23 48 70 48 70 0.95

2 27 0.0033 0.64 12.1 3.6 3 23 77 98 75 98 0.93

3 27 0.16 30 6.8 0.1 2 23 105 127 104 127 0.94

4 27 2e-05 0.0038 19.0 1.2 1 23 133 156 133 156 0.97

5 27 0.00043 0.083 14.8 0.1 1 23 161 183 161 183 0.97

6 27 0.0037 0.72 11.9 3.8 1 23 192 214 192 214 0.96

7 27 1.7e-06 0.00033 22.4 0.1 2 23 222 243 221 243 0.97

8 27 3.9e-06 0.00075 21.3 1.1 1 23 249 271 249 271 0.98

9 27 1.7e-06 0.00034 22.4 0.4 1 22 277 298 277 298 0.96

10 27 0.24 47 6.2 0.4 2 20 314 332 313 334 0.93

11 27 6.6 1.3e+03 1.7 0.3 1 19 342 361 342 364 0.72

12 27 0.0033 0.64 12.1 0.5 1 23 387 409 387 409 0.96

13 27 1.3 2.6e+02 3.9 1.7 3 23 416 436 414 436 0.96

14 27 0.79 1.5e+02 4.6 0.3 2 21 445 464 444 467 0.86

15 27 4.9 9.6e+02 2.1 0.4 1 23 475 498 475 498 0.85

16 27 0.75 1.5e+02 4.6 0.2 1 23 505 528 505 528 0.87

17 27 1.7 3.3e+02 3.5 0.6 2 23 539 560 538 560 0.95

18 27 2.7 5.3e+02 2.9 0.1 2 23 655 677 654 677 0.92

19 27 0.3 59 5.9 2.5 2 23 683 704 682 704 0.97

20 27 0.42 82 5.4 1.1 1 23 712 736 712 736 0.87

21 27 0.17 33 6.7 0.2 1 19 1533 1551 1533 1554 0.83

22 27 0.0023 0.44 12.6 0.1 3 23 1570 1591 1569 1591 0.94

23 27 4.6e-05 0.0088 17.9 0.3 1 23 1608 1630 1608 1630 0.96

24 27 0.88 1.7e+02 4.4 0.3 2 20 1661 1679 1660 1681 0.89

25 27 0.0041 0.79 11.8 1.5 3 23 1697 1718 1696 1718 0.96

26 27 6.9e-05 0.013 17.3 0.6 1 23 1734 1756 1734 1756 0.98

27 27 0.018 3.4 9.8 3.6 1 23 1897 1919 1897 1919 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00021	0.041	15.8	6.2	1	23	48	70	48	70	0.95
2	27	0.0033	0.64	12.1	3.6	3	23	77	98	75	98	0.93
3	27	0.16	30	6.8	0.1	2	23	105	127	104	127	0.94
4	27	2e-05	0.0038	19.0	1.2	1	23	133	156	133	156	0.97
5	27	0.00043	0.083	14.8	0.1	1	23	161	183	161	183	0.97
6	27	0.0037	0.72	11.9	3.8	1	23	192	214	192	214	0.96
7	27	1.7e-06	0.00033	22.4	0.1	2	23	222	243	221	243	0.97
8	27	3.9e-06	0.00075	21.3	1.1	1	23	249	271	249	271	0.98
9	27	1.7e-06	0.00034	22.4	0.4	1	22	277	298	277	298	0.96
10	27	0.24	47	6.2	0.4	2	20	314	332	313	334	0.93
11	27	6.6	1.3e+03	1.7	0.3	1	19	342	361	342	364	0.72
12	27	0.0033	0.64	12.1	0.5	1	23	387	409	387	409	0.96
13	27	1.3	2.6e+02	3.9	1.7	3	23	416	436	414	436	0.96
14	27	0.79	1.5e+02	4.6	0.3	2	21	445	464	444	467	0.86
15	27	4.9	9.6e+02	2.1	0.4	1	23	475	498	475	498	0.85
16	27	0.75	1.5e+02	4.6	0.2	1	23	505	528	505	528	0.87
17	27	1.7	3.3e+02	3.5	0.6	2	23	539	560	538	560	0.95
18	27	2.7	5.3e+02	2.9	0.1	2	23	655	677	654	677	0.92
19	27	0.3	59	5.9	2.5	2	23	683	704	682	704	0.97
20	27	0.42	82	5.4	1.1	1	23	712	736	712	736	0.87
21	27	0.17	33	6.7	0.2	1	19	1533	1551	1533	1554	0.83
22	27	0.0023	0.44	12.6	0.1	3	23	1570	1591	1569	1591	0.94
23	27	4.6e-05	0.0088	17.9	0.3	1	23	1608	1630	1608	1630	0.96
24	27	0.88	1.7e+02	4.4	0.3	2	20	1661	1679	1660	1681	0.89
25	27	0.0041	0.79	11.8	1.5	3	23	1697	1718	1696	1718	0.96
26	27	6.9e-05	0.013	17.3	0.6	1	23	1734	1756	1734	1756	0.98
27	27	0.018	3.4	9.8	3.6	1	23	1897	1919	1897	1919	0.98

Sequence Information

Coding Sequence: ATGCACTTGTGCATTCTCAAGAGAAGAAATATGTGTGTCGAATATGTGATAGGGGATTTACTCACCGTTCGCCTTTTAAGatttgTTTTTGTAAAGTCTGAACCTCTTGAGCTAACAACGAGTCATAATACAAATGGTCCCTACAAATGCAATCATTGCGGCAAGGAATATACAACTAAGCGACAGTTGAGTAAGCATAAAACTTTCCACGGAGAAAAGACTCACTTGTGCGATCTTTGTCCGAAGAAGTACAGATTCGCGTACATGCTTAAGAAACATCAACGGTTCACTCATCAAGATCAAGCGAGGGTACAGTGCGACATATGCGGAGGGCAGTACTGGACCAAGTACGCTCTCAAAGACCACATTAAGTTTGTTCACGAGAAGGCGTTCGAATTTAACTGCAAGGAATGTGGAAAGGGATTCAGGAGTCAAAACGGTCTCGTCCAACATAAGAAAACAAATCACGAAGGTATTAAATTTGAATGCCAGATTTGTTCAAGGCCATTTGTCACTGAAAAAGGTCTGCAAGATCACATTGTCAAGCATAATCCCGATTACAAATCCCCCGAACATAAATGTAAGATTTGTGGAAAGAGTTTTATCAGTTTGCAAGCTTGCAGAAAACATATCATACAGCACGTGGAAGGTCCATCCAAATTGGTCTGTGAATTATGCGGAAAATCTGTTACAACTGCCAGTTCACTGAAAGATCATATGAGGATTCACAACGGTGAAAGGCCCTTTAAATGTAACATCTGCGAGAAAACCTTTAACAGATCCGGAATGCTCAGGATCCACAATAGGGTGCACACTAAAGAAAAGCCCTACGTTTGCACAATATGCTTAAAAACATTCTCGCAACGCAGTTCACTGAAAATCCACATGAGgATATCTACTGTTAACCCTTTAGTTCCAACACTCAACAGTTCGTGCTTGCATTGCAACAAATGCGGaattgttttaaacgatttaggACAGTTTCACCAACACATTTATGAGACTAATAacaaaaatcactatttttactGTCCTGTTTGCAATTACAAAGTCGGGAGAACAATATTTCAATTCAACCAGCATGTAGAAACTTATTGCGGACTGAAACAACTAGACGTATGCGAAAAGAAACAACGGACGCCTTTAAGTAAACCGAAATATTTCTGCGAAAAGTGTGGAAAATCATTTTGGTTGTATTCTAATCTGTTGAGTCACGTCTCTGTCCATCAGAATGATAAAATCTTTTGTCCTCGCTGTTTTATGAGTTGTGTCAGTTTAAAATCGATTGTCAAGCATTACAGAGAACATCTTCTTCAAGGAAAAATAGTTTTGGTTTGTCCACTCTGTTCTATAGTTTTTTTCACTCCTGCACCTTATAAGACGCATTGCCAAATAGTTCATCAAAATTTCAACGAAATTTGTTTCAAGTGTTTTTTATGCCCGAGGGTGGTGTTCAATGATGAAAATAAATTCACCGAACACGTTTTGGAACATTGTGATAATCCGGACACATTTATTTGTTCAATTTGTGCACGCGGATTCAAATCAGCCAATATACTTTTCAATCACGAAAACGACACGCATCAATATCATAAGTGGTGGGGGAAAATTGTCAGTTGTAATCAGTGCAATCAAATGTTATCTTTAAGTATGATGGAACAACACCTGAAAATGATGCATAACgaaaaaaacattagaaaagtaCCAAAAATAACAAGTGTGATTAAACCAAAAGATCTAGCAAAAGAGATTTGGGTACACTGTGAAATATGTAACGCAAAATTTCATGGGTTTGAACGCTGTTTTAATCATAAATCTTTGATCCATTTCAATCATCAATTTTTGTGTAATCAATGCGACAAAAAATGCGGCAATGTTCCATCGTTACTACACCATTTTCGATGTAAGCACAGCGGATCTATCGTTCAAGAAACACAATCAAACAAGAAAGCATCCACCATTTACTGTCAAGCATGTGGATTAGGATTCTCGAACGTCCTATTAAGATTTAATCACATCCGCGAAGTGCATTTAAAAAGGTATATTCAGTGTACTCAATGTACACATTCATCTTCGACTTCAGAAGATTTAATTTTCCATTATAAAACCCACGATAAACACAGGGACACTATGTTTAATTGTGCCGTTTGTAATCAGGTGTTTTTCTTCACTCACGTAGATCTTACAATACACATGCGATATGCTCATGGAGAATACAATtttgagaaatataaacaatttttaacttttaaatataacaaattagCTAAAGGAATAACCGTGGTATCAGAAAATGAATCAGTTATATGTACACAACCAGAAAAACATTATGAGGAAGAGCCAAACAAACCGTCGTTGCCTACAAATcttaataatttgaaagaaattaaattaaccATGGAGCAGCacaaagcaaaagaaaaacagGAAGTGACACCCGCAAATAATGATACAATTACATCAGTAGCATGTACACAACCAGAAAAACATTGTGAGGAAGGGTCAAACCAATTGAAACCCACAAATGAAACATTTAAATCAGTAATATGTACACAGTCAAAAAATCATTGTGAAGAAGAGCCAAACCAAACGTCACCTAAAAACCTTAAACTTTTGAATGAAACTAAATTAACCCTTGAACAGCACAAAGTAAAGGAAGAACAAGAAGTGAAACTCAGAAATAATGAaacatttaaatcaaaaacatgTACACAGCCAGAAAAACGTAAAGAAGAACCAAACCGAACGCCATCTACAAATGAAACTAAATTAACCATGGAACAGCACAAAGCAAAGGAGAAACAAGAAGTAAAACtggtaaataaagaaacatttaaatCAGTAACATTTACACAatcagaaaaatattgtgacgaAAAACCAAATCAATCGTTAACTTCAAACCTTAAGAATTTGAAAGAATCTAAATTATCTACCGAACAGCAAAAAGCCAGTGAAAAACAGGAAGTGCAACCTGTAAATAATGAAACATTTACATTAGTAACATGCACACAACTAGAAAAACATTCTGAAGAAGATCTTAATCATTTGAAAGAATCTAAATTAATCATTGAGCAGTACAAAGctaaagaaaaacaagaatTGAATTCCGCAAATCATGAAGCATTAAAAACAAATCGCGATGAACAGAAAACCAAGCAAAAACTAGAGTTGAAGCTTGCAAATAAACCAGAAGCAAAACTATTCGACCGAGAAGTTACAACCGTTAAATCTGTTAAAGAAAACGTAGTTTTGATAGACGAACAACCTAAAGGAATTTCTTTAAAATCAACCGATTATATTACAATATCTGATGATTTCATAGAAACAGAGCAAAACAGAGCTGGAATTACAATTATGGATGAATCTGAAATAATAAGTGTTTCAGATGAAAGTAAAAATTTAGACAATACTGTGGGGAAGTGTGCAAATGGAAGCGATGATGAAGAGTTACTACACCTCCTTTTATCAATTGAACAAGAAGATTTTGATCAGCCCAGCGAGACTACGAAAACTGAAATTGACGAAAACAACAAATCCTGTACTGATGAAATGTTGATCAAGAAGATGCCCGCAATAGATGTAGAATTAAGAAGCACTGACGAATACAGTTGTGAAGATAGGCAGAAAAACGATAATGTATTAAAATCAACAGATTTTCGCatatcaaaacaaaatgaaaagttTGAGATAATATGCGCAAATATTCCTATACAATCTGACAGGGAAAAAAGACACATTTTTATGGAACATACAATGCAAGAAAAGCTTGGTGGTAGAATGCCTCAAGCAGAATTGACCAAACAATATGAAGAAACTGATGATACTAAAGCGCATTGCTCTTCAGTTAAAATTAAGGATGCTTTAAAAAAGTtaccattaaaaaataaaggaaaagtaAAAGGAGATAACATTTCTGCTAGATGTGGGAACAGAGCATTGTCAACGTACAAACAAAATGATACAGTGCCTTTACGAAGGACAAAAAAGCGTAAACTATCATCAGGAGAAGAGAAATATTTAGAGATACAagctaaagaaaataatgtaaaaggAGAACTCTCAAATcgtaaaaatacaaaatcttctaaacaaataaagaataaaaaaaataaagtaactgAAAGTTTAAAGAAACCCagtgataataaaatatgtgaAGAAAGTGTGTGTTTTGAAGAAAGATCGAGAGGAGGATCTAAACATAGTAAAGATCATGATGCTAAGAAATTTAAATCGGCTTCTGCTGTAGAAAATAAATCACCACATTTTTTTCCCACCGCGAATACAGAAAAAGATGTATACAATTCTCAATTTGTAAGTGGTCATCCATCTTCGTCGACGTTGGAAAATGTTTCAGTGGAACATGCTTTTTCATTTCCAACTTTAAATCAACCAAGTATGCAACAATATACAGAATACTACACTAATGCTCCAAttcaaaatccatttttttcttattcttatgGTTACAGTACAGTGGATAATGGAGCATATCAAAATTACTACCCGATGGGCTGTGGTACTCAAACTGAAACCCCTAGAAATACGAATTTGGTGGTTAACCTACCAACACCACCAAAACAGACAAGACACTTTGAATGCAGCggctgcaaaaaaaaattccccaGTCTTCCAATTTTGGAAACCCATTATATATACTGTTGTGAGATGGAAGCGAGAGTTTTTCAAGCACCAAAATCTGACTGTCCTTTATGTGGTTTCTTCTTTCCTGATATATCCCTTCTCAAGCAACACATATCACAGACGCATTCAAATTTATTCGTCGAGTTTAACCTTTATacgaaaaaaaagaaacatttttcttgcGGTATCTGCGACTTGAGTTTTAGTAATCAAGAATTTCTGGAAAAACACCAAGAAGATCATGATGCTTCTCAGTTTACTCCAGAACTTTCAGATCAACCTATAACGTCCGCCAACTGTACTATTGAAAGAAGCGAGTCTGCTCCCAAAATTAGTTGCAGAGGTTGCCAGAAGATGTTTCCCAGCACCGAAATACTGAAAGCACATCACTTGTTTTGCTGGAGAATGGAAACAGAAGTTCTTCGAGACTCACCAAAAGATTGTCCAATATGTTCAACGAAATTTACTTATTTCTTTACTCTGAAGAATCATATAACAAAGTCTCATAGcgctttaattaaagaatacaatttattttctttaaaagtttattatgtTTGCGACATTTGTGGACTGAACTTTGACAATTCAACTACACTaaacaatcataaaaaaaatcataaacgtTCGGGAAAAGTTAACACAATAATAACTACCAGCCAGAAATTAGCCAAAAAAACTAGACAAACTGAAGCAGAGGATGATAAGTCAAAATCTTCAAACAGATTTCGGGATAAAAGTCACaaagaaaatgtaaaagaaataattcattCGCCTACATTTGATCGAGCTGGACAGGCTGCGTTTACAAAGAAACTTCGAGATAAAGAGTTAAAAGATACACGTGAAAACTCATCCACCTCATCTGATGGTTTTAAAAATGCAGGaaatagaatcgatgaaaaactgCACTCTCAAAGTTCATctcgaagaaaaaataaatcgaatGATAGAGATGATGACAAAAAAGAGGATTCTTCTGTGTTTAAACTGACTGATTCTGAGTTACCTGATAATTTATCTACTGTTAGAGCAGGAATCTATAGATGCCAGATATGTGCTACACTATTTACCACTTATCGTGATTTTAAGAAGCATAAAATGAAGCATGATGATTCAAACGATGGGgaggaaaattatttagatcGGTTGAATCCGTCATCTTACACAGGCTTTAACAATGTTTCGTTTGATGATGAGTTGTTAAAAGGACGTGACACGGACAAAGAGCCTGATGAAACTGCTTCAAAAGACTCAACAAGTTTGCACACATCTAGACTTCCATACAAAGTAGTTACTTGTGATATTTGTTCTCAAGATTATCTTCAAGATCAAATTGGTAAACACGATTGTCCTGGACCATTCTAG
Protein Sequence: MHLCILKRRNMCVEYVIGDLLTVRLLRFVFVKSEPLELTTSHNTNGPYKCNHCGKEYTTKRQLSKHKTFHGEKTHLCDLCPKKYRFAYMLKKHQRFTHQDQARVQCDICGGQYWTKYALKDHIKFVHEKAFEFNCKECGKGFRSQNGLVQHKKTNHEGIKFECQICSRPFVTEKGLQDHIVKHNPDYKSPEHKCKICGKSFISLQACRKHIIQHVEGPSKLVCELCGKSVTTASSLKDHMRIHNGERPFKCNICEKTFNRSGMLRIHNRVHTKEKPYVCTICLKTFSQRSSLKIHMRISTVNPLVPTLNSSCLHCNKCGIVLNDLGQFHQHIYETNNKNHYFYCPVCNYKVGRTIFQFNQHVETYCGLKQLDVCEKKQRTPLSKPKYFCEKCGKSFWLYSNLLSHVSVHQNDKIFCPRCFMSCVSLKSIVKHYREHLLQGKIVLVCPLCSIVFFTPAPYKTHCQIVHQNFNEICFKCFLCPRVVFNDENKFTEHVLEHCDNPDTFICSICARGFKSANILFNHENDTHQYHKWWGKIVSCNQCNQMLSLSMMEQHLKMMHNEKNIRKVPKITSVIKPKDLAKEIWVHCEICNAKFHGFERCFNHKSLIHFNHQFLCNQCDKKCGNVPSLLHHFRCKHSGSIVQETQSNKKASTIYCQACGLGFSNVLLRFNHIREVHLKRYIQCTQCTHSSSTSEDLIFHYKTHDKHRDTMFNCAVCNQVFFFTHVDLTIHMRYAHGEYNFEKYKQFLTFKYNKLAKGITVVSENESVICTQPEKHYEEEPNKPSLPTNLNNLKEIKLTMEQHKAKEKQEVTPANNDTITSVACTQPEKHCEEGSNQLKPTNETFKSVICTQSKNHCEEEPNQTSPKNLKLLNETKLTLEQHKVKEEQEVKLRNNETFKSKTCTQPEKRKEEPNRTPSTNETKLTMEQHKAKEKQEVKLVNKETFKSVTFTQSEKYCDEKPNQSLTSNLKNLKESKLSTEQQKASEKQEVQPVNNETFTLVTCTQLEKHSEEDLNHLKESKLIIEQYKAKEKQELNSANHEALKTNRDEQKTKQKLELKLANKPEAKLFDREVTTVKSVKENVVLIDEQPKGISLKSTDYITISDDFIETEQNRAGITIMDESEIISVSDESKNLDNTVGKCANGSDDEELLHLLLSIEQEDFDQPSETTKTEIDENNKSCTDEMLIKKMPAIDVELRSTDEYSCEDRQKNDNVLKSTDFRISKQNEKFEIICANIPIQSDREKRHIFMEHTMQEKLGGRMPQAELTKQYEETDDTKAHCSSVKIKDALKKLPLKNKGKVKGDNISARCGNRALSTYKQNDTVPLRRTKKRKLSSGEEKYLEIQAKENNVKGELSNRKNTKSSKQIKNKKNKVTESLKKPSDNKICEESVCFEERSRGGSKHSKDHDAKKFKSASAVENKSPHFFPTANTEKDVYNSQFVSGHPSSSTLENVSVEHAFSFPTLNQPSMQQYTEYYTNAPIQNPFFSYSYGYSTVDNGAYQNYYPMGCGTQTETPRNTNLVVNLPTPPKQTRHFECSGCKKKFPSLPILETHYIYCCEMEARVFQAPKSDCPLCGFFFPDISLLKQHISQTHSNLFVEFNLYTKKKKHFSCGICDLSFSNQEFLEKHQEDHDASQFTPELSDQPITSANCTIERSESAPKISCRGCQKMFPSTEILKAHHLFCWRMETEVLRDSPKDCPICSTKFTYFFTLKNHITKSHSALIKEYNLFSLKVYYVCDICGLNFDNSTTLNNHKKNHKRSGKVNTIITTSQKLAKKTRQTEAEDDKSKSSNRFRDKSHKENVKEIIHSPTFDRAGQAAFTKKLRDKELKDTRENSSTSSDGFKNAGNRIDEKLHSQSSSRRKNKSNDRDDDKKEDSSVFKLTDSELPDNLSTVRAGIYRCQICATLFTTYRDFKKHKMKHDDSNDGEENYLDRLNPSSYTGFNNVSFDDELLKGRDTDKEPDETASKDSTSLHTSRLPYKVVTCDICSQDYLQDQIGKHDCPGPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -