Basic Information

Insect: Cosmopolites sordidus
Gene Symbol: CAS5_1
Assembly: GCA_031761425.1
Location: JARFXV010002004.1:63435-78037[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00012 0.023 16.6 1.2 2 23 166 187 165 187 0.97

2 16 4.6e-05 0.009 17.9 3.7 1 23 192 214 192 214 0.97

3 16 0.0001 0.02 16.8 3.3 1 23 220 242 220 242 0.96

4 16 0.005 0.97 11.5 2.2 1 20 248 267 248 267 0.96

5 16 8.6e-05 0.017 17.0 2.7 1 23 276 298 276 298 0.95

6 16 0.00029 0.055 15.4 0.1 1 23 512 535 512 535 0.96

7 16 5.3e-07 0.0001 24.0 4.9 1 23 541 563 541 563 0.98

8 16 5.7e-07 0.00011 23.9 4.8 1 23 569 591 569 591 0.97

9 16 0.0002 0.039 15.9 0.6 1 22 597 618 597 620 0.89

10 16 0.00091 0.18 13.8 0.9 1 23 634 656 634 656 0.97

11 16 6.1e-06 0.0012 20.7 5.5 1 23 662 684 662 684 0.98

12 16 1.9e-06 0.00037 22.2 0.5 1 23 691 713 691 713 0.96

13 16 4.3e-05 0.0083 18.0 1.3 1 23 719 741 719 741 0.98

14 16 6.5e-07 0.00013 23.7 0.8 3 23 749 769 747 769 0.96

15 16 5.4e-06 0.001 20.8 0.1 1 23 775 797 775 797 0.99

16 16 0.051 9.8 8.3 0.7 1 23 802 825 802 825 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00012	0.023	16.6	1.2	2	23	166	187	165	187	0.97
2	16	4.6e-05	0.009	17.9	3.7	1	23	192	214	192	214	0.97
3	16	0.0001	0.02	16.8	3.3	1	23	220	242	220	242	0.96
4	16	0.005	0.97	11.5	2.2	1	20	248	267	248	267	0.96
5	16	8.6e-05	0.017	17.0	2.7	1	23	276	298	276	298	0.95
6	16	0.00029	0.055	15.4	0.1	1	23	512	535	512	535	0.96
7	16	5.3e-07	0.0001	24.0	4.9	1	23	541	563	541	563	0.98
8	16	5.7e-07	0.00011	23.9	4.8	1	23	569	591	569	591	0.97
9	16	0.0002	0.039	15.9	0.6	1	22	597	618	597	620	0.89
10	16	0.00091	0.18	13.8	0.9	1	23	634	656	634	656	0.97
11	16	6.1e-06	0.0012	20.7	5.5	1	23	662	684	662	684	0.98
12	16	1.9e-06	0.00037	22.2	0.5	1	23	691	713	691	713	0.96
13	16	4.3e-05	0.0083	18.0	1.3	1	23	719	741	719	741	0.98
14	16	6.5e-07	0.00013	23.7	0.8	3	23	749	769	747	769	0.96
15	16	5.4e-06	0.001	20.8	0.1	1	23	775	797	775	797	0.99
16	16	0.051	9.8	8.3	0.7	1	23	802	825	802	825	0.97

Sequence Information

Coding Sequence: ATGGACATAGACAGGGTAGACATGTCCTTAATTTGCCGGACATGTAAATGTGTGTCTCCATCAATGCGGTCTATTTTTGATGCTTTAAACAGTGGGAATATTTCTGCTCACAATCCCCGTATTGACGAGATGCTAATGGCCTGTGCCGCTGTCCAGGTATCATTTGGTGATGGACTACCCAGTTTAATGTGTGATATGTGTATTCAAAGCCTAAAAAATGCTTTCATTTTCAAGAAACAATGTGAAACTGTTGATGTTAGCCTTAAAGAGTATTgcaaaaatttgaaagtaaatGCCATAAAACAAGAGCTGCAAAATTCAGATTTTATTGAATCATTAAATACTTTAAGTAatctattaaataatgaaactCAACTCCCTAAAGAAGTCCCCTCCGTAATTTCAAATGAACCAACTTCATTGAATTCTGAAAACAAGCACCGACCTCCAGAAACAGATTACATCCAACTGTTGGAAAATAATCAACTATTATTAACGTGTAGGGAATGTTCCAAGATATTTACAACTTTAGAAGGCTTAAGAAGTCATAAAAGATCCCACACGGGTACTTTATTTAAATGCAAGCAATGTGAGAAGGaatatacaagaaaaaatcatttggaAAGACATGAGGCATCACATGGTAAAAGAAAAGTACACGtttgtaaaatttgtaataaGACTCTCACAAGGATGGAACACTTAAAGAGACATTTAGTGATACATTTGAGAGAAAAACCATTCAACTGCAAAACATGTAATAGGGGTTTTAATCGGGTAGAACATTTACATAATCACATTCCAAGATGCAAAGGAGAAAACGTTCACTGCTGTCCTGTTTGTAATAAAGCCTTTAATAGAGAGGACAGTTTGGAAGTCCACAAACAGCAACATGACAGTATTCAACTTTCTTTGCCCACAATAGAAAATTTAGATAACATAGAACAACACTATTTTGAGGTTGACTATGATGCTAATTTAACTTTCTCTGATAATTCTGATGTTGAAGATTGTTTTGAACCACAAGTAGAAGTTACTGAAAGTTTTGATGAAAACAAAATAGATGTAGAAAATGAAGCTGCTGCTGCTGCTATACAGTCCATTGTTGAAGATAACACTGGGCCTGCAGaaactgagaagatgattcaatcgcAAGATGAAACCGCTACTTGCCTAGATATAACACAAGATTTGGAAGACAATGAAAATGATGAGAAACCATTAGCTGAATTGGTGGCGCTCGTAAAATCAGAAGAAAAAATTGAGTATCACATCCAAGAAGAggatgataatgataatgacaTACAGGATGATCCAGGAaatgataataatgatgatgGTCATGATAGTTCAGTAGATAGTTCGGACGAGGAATACTTACCGAAGAAAGTTGTTCAAACGCCTCCCAATGGTAAACGAAGAGGTAGACCCAGAAAATATCCACCTAAACCCAAAGTACCTGGTCGTCGAGGTCGACCCCCAGGGAGTACTGGTAAGAAGAAACTGAAGGAAGAGGATGAGGATATTGGTGAATATCCATGTCCAATTTGTAATGAATTTTATGATAGACTAAGTTTGCTTGATAAGCATGCAAGAGAAGCTCATCCAGGCCTAAAAGTTCACAAATGTAATATCTGTGGAAAAGACTTTAACCGACCAAACCATTTGAAACGTCATATGACATCACATTCATATGATAAACCTTATACGTGCGATATATGCACGAAAAGCTTTAGTCGACGCGATCACTTGAACCGACACCAGCAATTTCATGAAAGCAGTGGTGACCATCCCTGCGACATATGCGCGAAACCGTTTACTAGAGCTGATCAACTTGCTAAGCACAAAGCTTTCAAACATGGTATCGGGAATAAAACGGCTATTATGGGCGAGAAAAAGTATTACTGTGATATTTGCCAAAAAGGCTTTACAACTGAAAAATACCGAGATGTTCACATGAAAGCGCATAATGGCGAGAAAACGTTCCAGTGCAAAGTTTGTGAAAAAACGTTCTTTTCAAAATCCCATCTTACAGAGCACATGAAATTTCATAATGAACATTCCAAAAAGTTCCTTTGCTCTGAATGCGGACAAAGATTTATTCGTAACGATTATTTGGTTATACATATGAGAAGGCATAGAGGGGAAAAGCCATTTAAATGTAGATTCTGCGGCAAGGGTTTCCCTAGAACGACAGATCTTACAGTGCATGAAAGGTATCACACTGGAGAGAAAACTCATTTATGTACTGTATGTGGTCGTGGTTTTGGAAGGGCCTATAACCTAACAGTTCACATGCGAACACACACAGGTGAAAAACCATACCAGTGTACTTATTGTGATGCAGCATTCGCCCAAGGTAATGATTTGAAAGCCCACATCAGAAGACATACTGGCGAGAGATTCCAATGTGACTTATGTACAGAAAGCTTTTTAATGGGTTACCTTTTAACACAGCATAAGCGAACAGTTCATGGTTTAAATGTTGTCAGTAACATTAGAAGGTTACAACCTGTCAACAAGCAAGAAAATCCTGATGAACCCCCACCAATAACTATACCTTTACCAAAACCAGTAATACCAGAAAATCTTATGTTTAACCATCTTTTGCAACCTATACATAAACAAGAGAAAATGGAAGATACAATGCCACCTCCTGGACCAGCACCTCCCATTGCCATACCTTTGTCAAAACCAATGGTACCAGAAAATTTTATCCATTCAATCAACACGTTGCAGGCGCAGCTATCGTTTACTCAAATGCATTTTAGTTCTAGTCAAAGGCCAGCTGTATAG
Protein Sequence: MDIDRVDMSLICRTCKCVSPSMRSIFDALNSGNISAHNPRIDEMLMACAAVQVSFGDGLPSLMCDMCIQSLKNAFIFKKQCETVDVSLKEYCKNLKVNAIKQELQNSDFIESLNTLSNLLNNETQLPKEVPSVISNEPTSLNSENKHRPPETDYIQLLENNQLLLTCRECSKIFTTLEGLRSHKRSHTGTLFKCKQCEKEYTRKNHLERHEASHGKRKVHVCKICNKTLTRMEHLKRHLVIHLREKPFNCKTCNRGFNRVEHLHNHIPRCKGENVHCCPVCNKAFNREDSLEVHKQQHDSIQLSLPTIENLDNIEQHYFEVDYDANLTFSDNSDVEDCFEPQVEVTESFDENKIDVENEAAAAAIQSIVEDNTGPAETEKMIQSQDETATCLDITQDLEDNENDEKPLAELVALVKSEEKIEYHIQEEDDNDNDIQDDPGNDNNDDGHDSSVDSSDEEYLPKKVVQTPPNGKRRGRPRKYPPKPKVPGRRGRPPGSTGKKKLKEEDEDIGEYPCPICNEFYDRLSLLDKHAREAHPGLKVHKCNICGKDFNRPNHLKRHMTSHSYDKPYTCDICTKSFSRRDHLNRHQQFHESSGDHPCDICAKPFTRADQLAKHKAFKHGIGNKTAIMGEKKYYCDICQKGFTTEKYRDVHMKAHNGEKTFQCKVCEKTFFSKSHLTEHMKFHNEHSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCRFCGKGFPRTTDLTVHERYHTGEKTHLCTVCGRGFGRAYNLTVHMRTHTGEKPYQCTYCDAAFAQGNDLKAHIRRHTGERFQCDLCTESFLMGYLLTQHKRTVHGLNVVSNIRRLQPVNKQENPDEPPPITIPLPKPVIPENLMFNHLLQPIHKQEKMEDTMPPPGPAPPIAIPLSKPMVPENFIHSINTLQAQLSFTQMHFSSSQRPAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01307407;
90% Identity: -
80% Identity: -