Basic Information

Insect: Cosmopolites sordidus
Gene Symbol: -
Assembly: GCA_031761425.1
Location: JARFXV010000918.1:259165-299172[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 7.2 1.4e+03 1.6 2.8 2 23 73 95 72 95 0.94

2 33 0.51 99 5.2 0.3 2 23 103 125 102 125 0.94

3 33 7.7e-06 0.0015 20.3 0.6 1 23 129 152 129 152 0.96

4 33 0.52 1e+02 5.2 0.4 2 12 158 168 157 177 0.87

5 33 4.7e-06 0.00091 21.0 2.3 1 23 182 204 182 204 0.97

6 33 7.4e-07 0.00014 23.5 1.3 1 23 210 232 210 232 0.97

7 33 2.8 5.5e+02 2.8 0.6 6 23 292 309 284 309 0.93

8 33 2.5e-05 0.0048 18.7 0.5 1 23 335 357 335 357 0.99

9 33 6.5 1.3e+03 1.7 3.1 2 23 364 386 363 386 0.92

10 33 0.17 32 6.7 0.4 2 23 394 416 393 416 0.94

11 33 0.00013 0.024 16.5 1.3 1 23 420 443 420 443 0.96

12 33 0.018 3.5 9.7 0.4 3 23 450 467 449 467 0.92

13 33 4.5e-06 0.00088 21.1 3.0 1 23 473 495 473 495 0.98

14 33 6.3e-07 0.00012 23.8 0.4 1 23 501 523 501 523 0.98

15 33 2.3e-05 0.0045 18.8 2.8 3 23 531 551 529 551 0.96

16 33 0.00024 0.046 15.7 1.5 1 23 557 579 557 579 0.97

17 33 3e-05 0.0058 18.5 0.5 1 23 585 607 585 607 0.94

18 33 0.0018 0.36 12.9 1.8 1 23 613 635 613 635 0.98

19 33 7.3 1.4e+03 1.5 1.2 1 8 641 648 641 649 0.92

20 33 0.068 13 7.9 0.5 2 23 722 744 721 744 0.96

21 33 3.6e-05 0.007 18.2 1.8 1 23 748 771 748 771 0.94

22 33 0.027 5.2 9.2 0.4 2 23 777 795 776 795 0.90

23 33 1e-05 0.002 20.0 2.2 1 23 801 823 801 823 0.98

24 33 3.9e-07 7.6e-05 24.4 0.2 1 23 829 851 829 851 0.98

25 33 0.15 30 6.8 0.2 1 15 857 871 857 873 0.87

26 33 0.00017 0.033 16.1 0.5 1 23 956 978 956 978 0.99

27 33 9.4 1.8e+03 1.2 1.9 2 23 985 1007 984 1007 0.89

28 33 0.2 39 6.5 0.6 2 23 1015 1037 1014 1037 0.94

29 33 2.5e-05 0.0048 18.7 2.0 1 23 1041 1064 1041 1064 0.96

30 33 0.11 22 7.2 1.9 3 23 1071 1088 1070 1088 0.93

31 33 0.00035 0.068 15.1 7.1 1 23 1094 1116 1094 1116 0.98

32 33 2.3e-06 0.00044 22.0 0.3 1 23 1122 1144 1122 1144 0.98

33 33 3.5e-06 0.00068 21.4 2.5 1 23 1150 1172 1150 1172 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	7.2	1.4e+03	1.6	2.8	2	23	73	95	72	95	0.94
2	33	0.51	99	5.2	0.3	2	23	103	125	102	125	0.94
3	33	7.7e-06	0.0015	20.3	0.6	1	23	129	152	129	152	0.96
4	33	0.52	1e+02	5.2	0.4	2	12	158	168	157	177	0.87
5	33	4.7e-06	0.00091	21.0	2.3	1	23	182	204	182	204	0.97
6	33	7.4e-07	0.00014	23.5	1.3	1	23	210	232	210	232	0.97
7	33	2.8	5.5e+02	2.8	0.6	6	23	292	309	284	309	0.93
8	33	2.5e-05	0.0048	18.7	0.5	1	23	335	357	335	357	0.99
9	33	6.5	1.3e+03	1.7	3.1	2	23	364	386	363	386	0.92
10	33	0.17	32	6.7	0.4	2	23	394	416	393	416	0.94
11	33	0.00013	0.024	16.5	1.3	1	23	420	443	420	443	0.96
12	33	0.018	3.5	9.7	0.4	3	23	450	467	449	467	0.92
13	33	4.5e-06	0.00088	21.1	3.0	1	23	473	495	473	495	0.98
14	33	6.3e-07	0.00012	23.8	0.4	1	23	501	523	501	523	0.98
15	33	2.3e-05	0.0045	18.8	2.8	3	23	531	551	529	551	0.96
16	33	0.00024	0.046	15.7	1.5	1	23	557	579	557	579	0.97
17	33	3e-05	0.0058	18.5	0.5	1	23	585	607	585	607	0.94
18	33	0.0018	0.36	12.9	1.8	1	23	613	635	613	635	0.98
19	33	7.3	1.4e+03	1.5	1.2	1	8	641	648	641	649	0.92
20	33	0.068	13	7.9	0.5	2	23	722	744	721	744	0.96
21	33	3.6e-05	0.007	18.2	1.8	1	23	748	771	748	771	0.94
22	33	0.027	5.2	9.2	0.4	2	23	777	795	776	795	0.90
23	33	1e-05	0.002	20.0	2.2	1	23	801	823	801	823	0.98
24	33	3.9e-07	7.6e-05	24.4	0.2	1	23	829	851	829	851	0.98
25	33	0.15	30	6.8	0.2	1	15	857	871	857	873	0.87
26	33	0.00017	0.033	16.1	0.5	1	23	956	978	956	978	0.99
27	33	9.4	1.8e+03	1.2	1.9	2	23	985	1007	984	1007	0.89
28	33	0.2	39	6.5	0.6	2	23	1015	1037	1014	1037	0.94
29	33	2.5e-05	0.0048	18.7	2.0	1	23	1041	1064	1041	1064	0.96
30	33	0.11	22	7.2	1.9	3	23	1071	1088	1070	1088	0.93
31	33	0.00035	0.068	15.1	7.1	1	23	1094	1116	1094	1116	0.98
32	33	2.3e-06	0.00044	22.0	0.3	1	23	1122	1144	1122	1144	0.98
33	33	3.5e-06	0.00068	21.4	2.5	1	23	1150	1172	1150	1172	0.98

Sequence Information

Coding Sequence: ATGTGGAGACCGATTACTATTCCCAAGTTGGATCTTGTAAAGGTGCAGGTCGAATCTCCACATCTGGAAGATTGGTGTGAAACGTATCATGACGAGGAACTATTGTCAGTTCAGAAGGACTTCATCAGTAATGCCTGTTCCAACAGTTCTTCAGAATCTAGTTCAAAACAAAACCTCTCTTTAAATGAACAAACGCATGACAAAGACATCACCGTGAAATGTGAAGAGTGCAACCTTGATTTCGTGTGTGTTAATGATTACAGCCATCATCAGAAAAAAGTTCATAACATTGATAAACCAAAAATCGTTTGTTATATTTGCGGTATTATACTTGATTCTCGTATCTGCTTCTATAATCACATGAAGGATATTCACGGTGAAGATTTTCCGTGTGAGTCGTGCGGGAAAACTTTTAACAGACCTTATGATCTAAAAGAGCATTTTATCACTTATCACAATAAGAATGCTACACCTTGTGACATATGCGGGCGGAATTTTAAATCCATAAAATTCCACATGAAGAGTCATTTGGAACTTAAACCTTTTCAGTGCAAATATTGCAACAAGAGATTTCGTTCTAAAATTTCATTAACCGATCACTTGAACGCCCACACTGGCGAACGTCCTCACGTTTGTACAGTTTGTGGTAGAGGATTTACAACAAGGAGTAATCTTTCAGCGCATAAGAGAATTCATACCGGTGAAAAACCGCACGTGTGTATCGAATGCGGAAGAgcctttggtacaaaattcgaaAATTCGctttatgaaataaattatttaaaggaaGAATTTCTTGATTCCGAAGACTGTTCTGAAACGTATGGTGAGGAGGAGTTACTGTCAGATTGCAAGGATCGTATCAATTATGCATGTTCCATTGAGCTTAGTTCCAAACAGAACCTCTGCTTACATGAACAAACTCATTCCGATGAAAGTACCGTTAAAAGCGAAGAGTGTCATGACGAGACACTATTCTCAGTTTGCAATGATCTCATTACTTATGTCTGTTCGATTTGTTCCATTGAGTTTAGTTCCAAACAAAACCTCTCCTTACATGAACGAACACATGACAAAGAAATTACCGTCAAATGTGAAGAGTGCAACCTCGATTTCTCCTGTGTTAACGATTACAGCCATCATCAAaaacaaattcacaaaattaataAACCAAAAATCGTTTGTTATATTTGCGGAATTATACTTGATTCTCGCACCTGCTTCTACAATCACATGAAAGGTATTCACTGTGAAGACTTTCCGTGTGAAGCGTGTGGGAAAACTTTTAACAGGCCTTGTGATCTAAAAGAGCACTTTATCACTTATCACAATAAGAATGCTAATCCCTGCGACATATGCGGTCGGAATTTTGTATCCTTAAGAAACCACATGAAGAGTCATTTGGGACTTAAAGCTTTTCAGTGCAAATACTGCAACAAGAATTTTCGTTCTAATTTTTCGTTAACCGATCATCTGAATATCCACACTGGTGAACGTCGTTACGTTTGTACAGTTTGTGGCAGAGGATTTACAACACAAGGTAATCTTTCATCGCATAAGAGAATTCACACCGGTGAAAAACCGCACTTGTGTAACCAATGTGGAAAAGCCTTTCGTACAAAGTATAAATTGTCGGATCATTTGAAAATCCACACTGATGAAAAACCCTATACTTGCAAGGTTTGTAATAAACGTTTTTATCTAGCTACTAAACTAAGGCGCCATGAAGaaattcacactggtgaaaagCCACATGTATGTATCGAATGCGGAAAAGCTTTTGCTAGAAAGTGGGAATTGTCACTGCATATGAAAAcccacactggtgaaaaaccctACACTTGTAAGGTTTGTAATAAATCTTTTAATCTGGTTACTAGACTTAAGTATCATGAAAgaattcacactggtgaaaaaccataTGAGTGCAAGATATGCAACAAattcaaaAATTCGTTTCATGAAATAAATTATGTAAAGGATGAATTTCTTTATCCCGAACACTGTTCCGAAATATACCGCAAGCAAAACCTCTCCTCACAGGAACAAACTCATTCCGAAAAAAGCACCGTCAAATGTGAAGAGTGCAACCTCGATTTTGACTGTGTTAACGATTACAGCCATCATCAAAAAAGAGTTCATAAAATTGATAAACCAAAAATCGTTTGTTTTATTTGCGGAATTATACTTGATTCTCGCACCTGCTTCTACAATCACATGAAAGTTATTCACGGTGAAGACTTTCCCTGTGAAATGTGCGGGAAAACTTTTAACAGACCTTGTGATCTAAAAGAGCATTTTGTCACTTATCACGATAAGAACGCTACGCCCTGCGACATATGCGGTCGGAACTTTGTATCCTTGAGAAATCACATGAAGAATCATTTGGAACTTAAATCTTTTCAGTGCAAATACTGCAACAAGAACTTTCGTTCTAATCTTTCTTTAACCGATCACCTGAATATCCACACTGGTGAACGTCGTTACGTTTGTACAGTTTGTGGTAGAGGATTTACAACACAGGGTAATCTTTCAGCACATAAGAGAATTCACACCGGTGAAAAACCATACCTGTGTAACGAATGCGGAAGAGCCTTTGGTACAAAGAAGCAAATattcgaaaattcattttatgaaCGAAATTATTTACAGAAAGAATTTCTTAATCCTGAAGACTGTTTTGAAACATACTGCGAAGAGGAACTACCGCCAGATAACAAGGATATCAATTATGCATGTTCCATTGAGCTTGGTTCCAAACAAAGCCTCTCCTTACTAGAACAAACTCATTCCGTTGAAAGTACCGTCAAAAGCGAAGAGTGCCATGATGAGACACTGCTTTTAGTTTGCAATGATCTCATTACTTATGTCTGTTCGATTTGTTCTGGTGAGTTTAGTTCCAAACAAAACCTCTCCTTACATGAACGGACACATGACAAAGAAATCACCGTCAAATGTGAAGAGTGCAACCTCGATTTCGCCTGCGTTAACGATTACAGTCATCATCAAAAAGAAGTTCATAACATTAATAAACCAAAAATCGTTTGTTATATTTGCGGAATTATACTTGATTCTCGCACCTGCTTCTACAATCACATGAAAGGCACTCACGGTGAAGACTTCCCGTGTGAAACGTGTGGGAAAACTTTTAACAGGCCTTGTGATTTAAAAGAGCATTTTATCACTTATCACGATAAGAATGCGAATCCGTGCGACATATGCGGTCGTAATTTTGTATGCTTAAGAAATCACATGAGGAATCATTTGGGACGTTCCCCTTTTCATTGCAAATTTTGCAACAAGAATTTCAGTTCAAACCATTCCTTAACCGATCACCTGAATATGCACACTGGTGAGCGTCGTTACATTTGTACAGTTTGTGATAGAGGATTTACAACACAGGGCAATCTTTCAGTACATAAGAGAATTCACACCGGTGAAAAACCACACGTGTGTAACGAATGCGGAAAAGCTTTTACTACAAAGAGGCAAATGTCACAACATTTGCAAACACACACGGGTGAACGACCATTTGAGTCGTGTATGATAAGATTTAAAACAATCGATATGAAGTCCAAAATTGCATTTGCTGCACACAAAGGTCGCATCTTGCACATCGTAGCTGAATGGGATTTTTTATCGGACAATAATCCAGGCGATCAGACCTCACTTTTTCAGGAACATTTGAGAGTTGAGGAACCTCCTAAAAGAAAACCATGTGGCCATCGGGCCGACCACAATGAAGCCGAACGGGGTTCTGATATCATCCAAAACAGACCAAGACAGAATAGCCATCAAAAAGCTATTCGACGAGAAAGGCTTACTAAAAGGCGATCTGAACTCTGCCAATAG
Protein Sequence: MWRPITIPKLDLVKVQVESPHLEDWCETYHDEELLSVQKDFISNACSNSSSESSSKQNLSLNEQTHDKDITVKCEECNLDFVCVNDYSHHQKKVHNIDKPKIVCYICGIILDSRICFYNHMKDIHGEDFPCESCGKTFNRPYDLKEHFITYHNKNATPCDICGRNFKSIKFHMKSHLELKPFQCKYCNKRFRSKISLTDHLNAHTGERPHVCTVCGRGFTTRSNLSAHKRIHTGEKPHVCIECGRAFGTKFENSLYEINYLKEEFLDSEDCSETYGEEELLSDCKDRINYACSIELSSKQNLCLHEQTHSDESTVKSEECHDETLFSVCNDLITYVCSICSIEFSSKQNLSLHERTHDKEITVKCEECNLDFSCVNDYSHHQKQIHKINKPKIVCYICGIILDSRTCFYNHMKGIHCEDFPCEACGKTFNRPCDLKEHFITYHNKNANPCDICGRNFVSLRNHMKSHLGLKAFQCKYCNKNFRSNFSLTDHLNIHTGERRYVCTVCGRGFTTQGNLSSHKRIHTGEKPHLCNQCGKAFRTKYKLSDHLKIHTDEKPYTCKVCNKRFYLATKLRRHEEIHTGEKPHVCIECGKAFARKWELSLHMKTHTGEKPYTCKVCNKSFNLVTRLKYHERIHTGEKPYECKICNKFKNSFHEINYVKDEFLYPEHCSEIYRKQNLSSQEQTHSEKSTVKCEECNLDFDCVNDYSHHQKRVHKIDKPKIVCFICGIILDSRTCFYNHMKVIHGEDFPCEMCGKTFNRPCDLKEHFVTYHDKNATPCDICGRNFVSLRNHMKNHLELKSFQCKYCNKNFRSNLSLTDHLNIHTGERRYVCTVCGRGFTTQGNLSAHKRIHTGEKPYLCNECGRAFGTKKQIFENSFYERNYLQKEFLNPEDCFETYCEEELPPDNKDINYACSIELGSKQSLSLLEQTHSVESTVKSEECHDETLLLVCNDLITYVCSICSGEFSSKQNLSLHERTHDKEITVKCEECNLDFACVNDYSHHQKEVHNINKPKIVCYICGIILDSRTCFYNHMKGTHGEDFPCETCGKTFNRPCDLKEHFITYHDKNANPCDICGRNFVCLRNHMRNHLGRSPFHCKFCNKNFSSNHSLTDHLNMHTGERRYICTVCDRGFTTQGNLSVHKRIHTGEKPHVCNECGKAFTTKRQMSQHLQTHTGERPFESCMIRFKTIDMKSKIAFAAHKGRILHIVAEWDFLSDNNPGDQTSLFQEHLRVEEPPKRKPCGHRADHNEAERGSDIIQNRPRQNSHQKAIRRERLTKRRSELCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -