Basic Information

Insect: Cosmopolites sordidus
Gene Symbol: -
Assembly: GCA_031761425.1
Location: JARFXV010000918.1:320036-345555[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 38 0.16 30 6.8 0.1 2 23 114 136 113 136 0.94

2 38 1.7e-05 0.0034 19.2 1.8 1 23 140 163 140 163 0.96

3 38 0.037 7.1 8.8 0.9 3 23 170 187 168 187 0.85

4 38 0.0035 0.68 12.0 1.7 1 17 193 209 193 210 0.93

5 38 7.5e-05 0.014 17.2 0.1 1 23 221 243 221 243 0.98

6 38 0.18 35 6.6 0.9 1 13 249 261 249 263 0.88

7 38 9.3e-05 0.018 16.9 0.5 1 23 346 368 346 368 0.97

8 38 9.1 1.8e+03 1.2 2.9 2 23 375 397 374 397 0.91

9 38 0.32 62 5.8 0.4 3 23 406 427 404 427 0.94

10 38 0.00019 0.037 15.9 2.3 1 23 431 454 431 454 0.91

11 38 0.13 26 7.0 1.1 3 23 461 478 459 478 0.89

12 38 0.00028 0.055 15.4 2.5 1 23 484 506 484 506 0.98

13 38 0.00049 0.095 14.7 0.1 1 23 512 534 512 534 0.98

14 38 5e-05 0.0097 17.8 1.6 1 23 540 562 540 562 0.98

15 38 0.0012 0.23 13.5 1.1 1 23 644 666 644 666 0.98

16 38 0.66 1.3e+02 4.8 0.2 2 23 703 725 702 725 0.93

17 38 7e-05 0.014 17.3 0.3 1 23 729 752 729 752 0.96

18 38 0.15 29 6.8 1.6 2 23 758 776 757 776 0.92

19 38 0.017 3.3 9.8 4.0 1 23 782 804 782 804 0.97

20 38 0.0002 0.038 15.9 0.3 1 23 810 832 810 832 0.96

21 38 0.0013 0.26 13.3 0.1 5 21 842 858 841 859 0.92

22 38 0.00022 0.042 15.8 1.0 1 23 866 888 866 888 0.97

23 38 2.7e-05 0.0052 18.6 3.2 2 23 895 916 894 916 0.97

24 38 0.15 28 6.9 0.2 5 23 954 972 952 972 0.95

25 38 0.00041 0.079 14.9 0.6 1 23 998 1020 998 1020 0.98

26 38 8.7 1.7e+03 1.3 0.7 3 23 1058 1079 1057 1079 0.94

27 38 0.00054 0.1 14.5 0.3 1 23 1083 1106 1083 1106 0.96

28 38 0.14 26 7.0 1.9 2 23 1112 1130 1111 1130 0.93

29 38 5.2e-05 0.01 17.7 1.8 1 23 1136 1158 1136 1158 0.98

30 38 6.4e-07 0.00012 23.7 0.6 1 23 1164 1186 1164 1186 0.98

31 38 7.8e-06 0.0015 20.3 2.7 1 23 1192 1214 1192 1214 0.97

32 38 8.4e-05 0.016 17.1 4.6 1 23 1220 1242 1220 1242 0.98

33 38 5.7e-06 0.0011 20.7 0.6 1 23 1248 1270 1248 1270 0.98

34 38 0.00015 0.029 16.3 2.3 1 23 1276 1298 1276 1298 0.99

35 38 6.8e-06 0.0013 20.5 1.3 1 23 1304 1326 1304 1326 0.99

36 38 1.3e-05 0.0025 19.6 0.6 1 23 1332 1354 1332 1354 0.97

37 38 0.0002 0.039 15.9 1.1 1 23 1360 1382 1360 1382 0.98

38 38 0.042 8 8.6 3.8 1 23 1388 1411 1388 1411 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	38	0.16	30	6.8	0.1	2	23	114	136	113	136	0.94
2	38	1.7e-05	0.0034	19.2	1.8	1	23	140	163	140	163	0.96
3	38	0.037	7.1	8.8	0.9	3	23	170	187	168	187	0.85
4	38	0.0035	0.68	12.0	1.7	1	17	193	209	193	210	0.93
5	38	7.5e-05	0.014	17.2	0.1	1	23	221	243	221	243	0.98
6	38	0.18	35	6.6	0.9	1	13	249	261	249	263	0.88
7	38	9.3e-05	0.018	16.9	0.5	1	23	346	368	346	368	0.97
8	38	9.1	1.8e+03	1.2	2.9	2	23	375	397	374	397	0.91
9	38	0.32	62	5.8	0.4	3	23	406	427	404	427	0.94
10	38	0.00019	0.037	15.9	2.3	1	23	431	454	431	454	0.91
11	38	0.13	26	7.0	1.1	3	23	461	478	459	478	0.89
12	38	0.00028	0.055	15.4	2.5	1	23	484	506	484	506	0.98
13	38	0.00049	0.095	14.7	0.1	1	23	512	534	512	534	0.98
14	38	5e-05	0.0097	17.8	1.6	1	23	540	562	540	562	0.98
15	38	0.0012	0.23	13.5	1.1	1	23	644	666	644	666	0.98
16	38	0.66	1.3e+02	4.8	0.2	2	23	703	725	702	725	0.93
17	38	7e-05	0.014	17.3	0.3	1	23	729	752	729	752	0.96
18	38	0.15	29	6.8	1.6	2	23	758	776	757	776	0.92
19	38	0.017	3.3	9.8	4.0	1	23	782	804	782	804	0.97
20	38	0.0002	0.038	15.9	0.3	1	23	810	832	810	832	0.96
21	38	0.0013	0.26	13.3	0.1	5	21	842	858	841	859	0.92
22	38	0.00022	0.042	15.8	1.0	1	23	866	888	866	888	0.97
23	38	2.7e-05	0.0052	18.6	3.2	2	23	895	916	894	916	0.97
24	38	0.15	28	6.9	0.2	5	23	954	972	952	972	0.95
25	38	0.00041	0.079	14.9	0.6	1	23	998	1020	998	1020	0.98
26	38	8.7	1.7e+03	1.3	0.7	3	23	1058	1079	1057	1079	0.94
27	38	0.00054	0.1	14.5	0.3	1	23	1083	1106	1083	1106	0.96
28	38	0.14	26	7.0	1.9	2	23	1112	1130	1111	1130	0.93
29	38	5.2e-05	0.01	17.7	1.8	1	23	1136	1158	1136	1158	0.98
30	38	6.4e-07	0.00012	23.7	0.6	1	23	1164	1186	1164	1186	0.98
31	38	7.8e-06	0.0015	20.3	2.7	1	23	1192	1214	1192	1214	0.97
32	38	8.4e-05	0.016	17.1	4.6	1	23	1220	1242	1220	1242	0.98
33	38	5.7e-06	0.0011	20.7	0.6	1	23	1248	1270	1248	1270	0.98
34	38	0.00015	0.029	16.3	2.3	1	23	1276	1298	1276	1298	0.99
35	38	6.8e-06	0.0013	20.5	1.3	1	23	1304	1326	1304	1326	0.99
36	38	1.3e-05	0.0025	19.6	0.6	1	23	1332	1354	1332	1354	0.97
37	38	0.0002	0.039	15.9	1.1	1	23	1360	1382	1360	1382	0.98
38	38	0.042	8	8.6	3.8	1	23	1388	1411	1388	1411	0.97

Sequence Information

Coding Sequence: ATGCTCGTTTTGATGGAAGTAGGTTTAGTCGTTTCAAAAAGattcgaaaATTCATTGGATGGAATACATTTCTTAAAGGATGAATATACTTCATATCCTAAAGATGAGCCTGAAACGTACCATGATGAGGAACTGCTGTCAGTTCAAAACGACTACGTCAGTTATGCTTGTTCTAACAGTGCTATTGAATCTACTTCCAAACAAAAGCTCCCCTTATATGTTCAGTCACAGTTCACAGACCTCACTGTTAAATGTGAAGAGTGTAATCTTGATTTCCCCTGTGTTAACGATTACAGCCATCATCAAAAAGAAgttcataaaattaataaactaaaaatagttTGTTTCATTTGCGGAATTATACTTGATTCTCGCCCCAGCTTCTACAATCATATGAAAGACATTCACGGTGAAGACTTTCCGTGTGAAATGTGCGGGAAAACTTTTAACAGACCTTGTGATCTAAAAGAACATTTTATCACTTATCACAATAAGAATGCTAAGCCCTGCGACATATGCGGTCGGAATTTTAAATCCTTAAGTCAACACATGAAGAGTCATTTGGAACTTAAACCTTTTCAATGCAAATACTGCAACAAGAATTTTCGTTCTAAGATTTCCTTAAACAATTGTCTGAATATCCACACTGGTAAACGTCCTTACGTCTGTACTGTTTGTGGTAGAGGATTTACAACAGGAGCTAATCTTTCAGGGCATAAGAGAATTCACACCGGTGAAAAACCGCACGTGTGTAACCAATGCGGAAAAgcctttggtacaaaatttaaaaattcattatatgAAACAGATTGTTTAAAGAGCCAATCTCCATATTCCGAAGATCGGTCTGAAGCGTGTCATGAGGAGGAACTATTGACAGTTCATAAGGACTTCGTCAGTTCCTGCAATTCCATTGAACCTAGTTCAAAGCAGAACCTCTCGTTACAGGAACAAACTCATTCCCCGGAAAGTACCATTAAATCTGAAGAATATCACGACGAGACGCTATTCTCAGTTTGCAATGGCCTCATCACTTACATTTGCTCGATCTGTTCTATTGTGTTTAGTTCCAAGCAAAACCTCTTCTTACACGAACAAAGTCATTCCAAGAAAAGCTCCATCAAATGTGAAGAGTGCAACCTTGATTTCGACTGTCTGAAAGATTATAGCCATCATCAAAAAGATGTTCACAATATTATTAACCATCAAATCGCTTGTTACATTTGCGGTATTATACTTGACTCTCGCCGCTGTTTTTACAATCACATGAAAGCAATTCACGGTGAAGACTTTCCATGTGAAATGTgtggaaaaacttttaagaaacCTTGTGATCTAAAGGAACATTTTGTCAGTTATCACAATAAGAATGCTAAGCCCTGCGACATATGCGGTCGGAATTTTAAATTCTTAAGAGATCACATGAAAAGTCATTTGGAACTTAAACCTTTTCGGTGCAAATACTGCAGCGCGAAGTTTCGTTTTAAGATTTCCTTAACCAATCACCTGAATGTCCATACTGGTGAACGCCCTTACGTTTGTACAGTTTGTGGTAGAGGATTTATATCAGGGAATAGTCTTTCAGCACATAAAATAACTCACACTGATGAAAAACCACACGTGTGTAACCAATGCGGAAAAGCCTTTGGTACAACGAATAAATTGTCAGATCATTTGAGAactcacactggtgaaaaaccctACACTTGTaaagatGAATTTCTTGATTCCGAAGACTCTTCTGAAGCGAACCGTGAGGAGAAAGTACTTTCAGATCGCAAGAATCCCATCAGTTATGAATGTTCGATTGGGTTTCGTTCCAAACAAAACCTTTCTTTACCCGAACAAACTCATTCCGAAGGAAGCACCGTTAAATGTGAAGATTATTATGACGAGACACTGTTCTCAGTATGCAATGATCTCATCACTTATGTCTGTTCGATCTGTTCCACTGAGTTTAATTCCAAGCAAAATTTCTCCTTACACGAACAAAGTCATTCCAAGAAAAGCTCCATCAAATGTGAAGAATGCAACCTTGATTTCGACTGCCTGAAAGATTATAGCTATCATCAAAAAGATATTCACAATATTATTAACCATCAAATCCCTTGTTATATTTGCGGTATTATACTTGACTCTCGCATCTGTTTCTACAATCACATGAAAGATATTCACGATGAAGACTTTCCTTGTGAAATGTGTGGGAACACTTTTAAGAGACCTGTAGATCTAAAAGAACATTTTATCACTTATCACAATAAGAACGCTAAACCATGCGACATATGCGGTCACAATTTTAAATCCTTAAGAGTTCACATGCAGAGTCACTTGGAACATAAACCTTTTCAGTGCAAATACTGCAACGAGAACTTTCCTTCTAAATTTCTCTTATTCTGTCACCTAAATATCCACACTGGTAAAAGTCCTTACGTTTGTATAATTTGTggtataagatttaaaaaaaggaGTAATCTTTTAGCGCATAACAGAATTCATGCCAGTAAAAAACCACAAGTGGATAACCAATGCGGAAAAACATTTGATACACAGTCGAATATGCGAGAGCATTTGAATGTTCGCAGTGGTGAGAGACCTTTCATTTGTATGGTTTGTAATAAATCTTTTATTAACGAGACTAGCCTGAAGTATCATGAAAGAAATCATAGTGGTGAAAAACATTGTACttgtaaattttgtaataaatattttagtgaCCCTACCGAACTGTGGGATCATCAAAGAACCCATACTGGTAAAAAACCTTACACTTGTAAGgatGAATTTCTTGATTCCGAAGACTCTTCTGAAGCGTACCTTGAGGAAAAAGTACTGTCAGATCACAAGGATCGCATTAATTATGAATGTTCTATTGGGTTTCGTTCCAAACAAAACCTTTCCTTACACGAACAAAGTCATTCCGAAGGAAGTACCGTTAAATGTGAAGATTATTATGATGAGACACTATTCTCACTTTGCAATGATCTCATCACTTATGTCTGTTCGATCTGTTTCACTGAGTTTAATTCCAAGCAAAACCTTTGGTTACACGAACAAAGTCATTCCAAGAAAATCACCATTAAATGTGAACGTTGTAATCACGATTTTCCATGTCTGAAAGATTATAGCCATCATCAAAAAGATATTCACAATATTATTAACAATCAAAGTGCTTGTTATATTTGCGATATTCTACTTGATTCTCGCATCTGTTTCTACAATCACATGAAAAATATTCACGATGAAGATTTTCCCTGTGAAATGTGTGGGAACACTTTTAACAGACCTTTAGATCTAAAAGAACATTTTATCACTTATCACAATAAGAATGCTAAACCATGCGACATATGCGGTCACAATTTTAAATCCTTAAGAGTTCACATGAAGAGTCATTTGGAACTTAAAGCGTTTCAGTGCAAATATTGCAATGAAAAGTTTCGTTCTAAAATTCGTTTAATCAATCATCTGAATATCCACACTGGTGAACGTCCTTACGTTTGTACAATTTGTGGTTTAAGATTTACGAAAAGCAGTAATCTTTCAGCGCATAAGAGGATTCACGCCAGTAAAAAACCACACGTGTGTAACCATTGTGGAAAAGTCTTTGATACAAAGTCGAATATATCTGAGCATTTGAAAATCCACACCGGTGGAAAGCCTTTCACTTGTaaagtttgtaataaatgttttagtCAGGTTGCTACAATGAAGCGTCATGAAAAAACTCACAGTGGTGAAAAGCCGCATGTATGTAACGAATGTGGAAAACCCTTTGCTACAAAGTGGCAAATGTTACTGCATATCAAAACCCACACTGGAGAAAAATCCTACACTTGTAAAGTTTGTAATAAAGGATTTATTCATATTAGTGGTCTGAAGTATCACGAGAAAACTCATACTGGTGAAAAACCCTATACCTGTGaagtttgtaataaatgttttagtCTACCTGCTCTTCTGAAGGATCATGAAAGAACTCATACTGGTGTAAAACCACACGTGTGTAACGAATGCGGAAAAGCCTTTGCTAGAAAGTGGCAAATGTTAATGCATttgaaaattcacactggtgaaaaaccgtACACTTGTAAAGTTTGTAATAAAGGTTTTATTCAGGTTACTAAACTGAAGTATCACGAAAGAATTCACAATAATGAAAAACCATACGAGTGCGAGATATGTCACAAGTTTTATTTAAGGCCAGACAATCTACGATTCCACCAAAagaaatttcatgacattcaaTGA
Protein Sequence: MLVLMEVGLVVSKRFENSLDGIHFLKDEYTSYPKDEPETYHDEELLSVQNDYVSYACSNSAIESTSKQKLPLYVQSQFTDLTVKCEECNLDFPCVNDYSHHQKEVHKINKLKIVCFICGIILDSRPSFYNHMKDIHGEDFPCEMCGKTFNRPCDLKEHFITYHNKNAKPCDICGRNFKSLSQHMKSHLELKPFQCKYCNKNFRSKISLNNCLNIHTGKRPYVCTVCGRGFTTGANLSGHKRIHTGEKPHVCNQCGKAFGTKFKNSLYETDCLKSQSPYSEDRSEACHEEELLTVHKDFVSSCNSIEPSSKQNLSLQEQTHSPESTIKSEEYHDETLFSVCNGLITYICSICSIVFSSKQNLFLHEQSHSKKSSIKCEECNLDFDCLKDYSHHQKDVHNIINHQIACYICGIILDSRRCFYNHMKAIHGEDFPCEMCGKTFKKPCDLKEHFVSYHNKNAKPCDICGRNFKFLRDHMKSHLELKPFRCKYCSAKFRFKISLTNHLNVHTGERPYVCTVCGRGFISGNSLSAHKITHTDEKPHVCNQCGKAFGTTNKLSDHLRTHTGEKPYTCKDEFLDSEDSSEANREEKVLSDRKNPISYECSIGFRSKQNLSLPEQTHSEGSTVKCEDYYDETLFSVCNDLITYVCSICSTEFNSKQNFSLHEQSHSKKSSIKCEECNLDFDCLKDYSYHQKDIHNIINHQIPCYICGIILDSRICFYNHMKDIHDEDFPCEMCGNTFKRPVDLKEHFITYHNKNAKPCDICGHNFKSLRVHMQSHLEHKPFQCKYCNENFPSKFLLFCHLNIHTGKSPYVCIICGIRFKKRSNLLAHNRIHASKKPQVDNQCGKTFDTQSNMREHLNVRSGERPFICMVCNKSFINETSLKYHERNHSGEKHCTCKFCNKYFSDPTELWDHQRTHTGKKPYTCKDEFLDSEDSSEAYLEEKVLSDHKDRINYECSIGFRSKQNLSLHEQSHSEGSTVKCEDYYDETLFSLCNDLITYVCSICFTEFNSKQNLWLHEQSHSKKITIKCERCNHDFPCLKDYSHHQKDIHNIINNQSACYICDILLDSRICFYNHMKNIHDEDFPCEMCGNTFNRPLDLKEHFITYHNKNAKPCDICGHNFKSLRVHMKSHLELKAFQCKYCNEKFRSKIRLINHLNIHTGERPYVCTICGLRFTKSSNLSAHKRIHASKKPHVCNHCGKVFDTKSNISEHLKIHTGGKPFTCKVCNKCFSQVATMKRHEKTHSGEKPHVCNECGKPFATKWQMLLHIKTHTGEKSYTCKVCNKGFIHISGLKYHEKTHTGEKPYTCEVCNKCFSLPALLKDHERTHTGVKPHVCNECGKAFARKWQMLMHLKIHTGEKPYTCKVCNKGFIQVTKLKYHERIHNNEKPYECEICHKFYLRPDNLRFHQKKFHDIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -