Csor004916.1
Basic Information
- Insect
- Cosmopolites sordidus
- Gene Symbol
- Trerf1_1
- Assembly
- GCA_031761425.1
- Location
- JARFXV010000106.1:368814-396833[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-12 2e-08 35.7 0.3 2 46 810 854 809 854 0.96
Sequence Information
- Coding Sequence
- ATGAATAAAAGACCTAAGGGAAGACCAAAACGCATTTGGAAAAAAGACATCAACGAATTGAAGGATCCTGACAACAAAAAAGTCGATAAGAAAGAGCAAACAGGACCGCCCTTACAAACAGCTAGCAGTAGCGTCAGAGCTCTaatcgaagaaaaaatcatcAGTAAAAGAAACTCTTCACCAAGTACTACACACCACCCCGAACCAGTCACACATACATCTTCAGCTACTCAAGTCGATATGGATTCCAAAATATCCTCGTTCGTTGTTCCAGCACCACCGCAACAAAATTTGGATAAAAGCAGAAGACATTCCGATGCTGAAGCCCTCAAAAATTCGAAATCGTACCAAGAAGCCCAAGCGGTTGCCGATTTGATATTGAAAAGAGAAAAGATATCCGTTAAAAGGACAGCTTCAGATCCCGGCCAATCTTCATCTCATTTACTGCAATATAGATCGGATTCATTTTCACTGGACAGTGTGGATATGTATCAGAATGATGAACCGCATTTCGTCACACCCAGTTTAGAAGATGAAGTATTTACGAATAATAGTATGATGCTTCAAAGTGTCGATCCATCTCAATTATCCCAAATCCCGTTTCAACCAGACACACTAGATGATAATCTGCTTCATATTAAAGATGATAATTTGCTGCACATAAAAGaagaaaacctgcttgatatgaAAAACGAAGGTGAAGAGCAACTTCAAGAATTAAGTTTGGATGATATAGCAAGTCTTCATGAAGAACCGATGAACATTTCACAGCAAACGATTCACTCTATTAATCCAGTAAATCAAGATCTGCAAGCTGTGTTAAATTCGCCCTTACCGGAGAGTTTGGCTGAGTTTAGTACGTATCACACTtctaaaaatttggaaattcATTCTCCCAATTACAATACTCAGTCTCCTGCACACTATGCTAAGTCCCCACATACTTATACTGCTCAATCTCCACTACAAAGTCCCATGATTAGGCATGATTCGCCAGGATTTGCATATCCTACCCCTCCTGCCAGTCACGAAGGTCAAAGTCCATGTTTTAGCCAAAATATGAGTGTTCCATTAGTGTCACCCAGTGATGATTTTGGTCAAGTGGTTGAAAGaggaTTAGATGAACCACCACAAGCATCTTCCCCACTTTCAGCTGCTTTTTACACTAGTACAATGTCCAGTTCGGCTGCTGTTGAAGAAGCAATACAGGAAATATTACCAGGAGAAAGTATACATGAAGACAGCTTATACCCATTATCAAATACACCTCCATCTCAGTCTGAAAATGATTCGCTCGGTCTTACTACACCCGTACCTTCTCCTAGAGTTGTGTCTACATCTTTACCATCGCCACATCCAGGAAATGCATTCAGTCCTTCACCGAAAGCAGGATGTCAAACATCTGGACTTGGAAATCAGTGGGGTGCACCCACCACACTTATGTTACCCAATTCTGATGATCCCCTCTTATCGAGTCAGCCAAAAGACTTCGTTCCCAAAAAAAGAATTCAATTAAATGGTGTTCCAGTTAGATTAATCAGTAACAATGGACTAATTGAACTGAACAGCACTAATTTTACTGGACTATTATTAGACGCTAACGGAGAGATCAAACTGATTCAAACCGGAGGAGGTGGTCTACCCACCAAGAATTTTGTGATGACAAACGCACAATTGGTTACTACAACGACAGCCAATCAAGATCCTGGAAGCAAAGATAAGCCTAAAGTACAAAAAGTGACTGTGGCCAAAGCTGTACAGCATCCTTCATCGATTAAATTAGTTACGAATAGAAATAAGACCCTTGTTGATGCCAAGAGGGAAGagtgcaataatatttttctcagTCCGACAACGATTCCTACTAACAGTCCAATGAAACCAGCACGAAAACGTTTGAGAACGGAACCCTTACAACTGCCCGTATTTCATCAGTCGAAACTGAGAGCAACTCGTAGTAAACCTCAAGGTTCAGCCCAATATACACCTCAACCAATCCTGAATCCACAAAGGATTGGAACTGGGCTGTATGTAAATTTAAAGCAGAAATCCAatGAAGATGGAACAACATGGAATAGTGATCCAATCCCTGAAACCGATTCAACACCCCACATAAACATAGGTGCTCAGTACCAGTGTAGTATACCAAGTTATAGATCGGTACCAAGACGAACCTCACCAGAACCTGCATATGAAGATCTACTTTGGGATCCCGGTATTGGGATGTGTACCGATTCTGAAGTCGATATGTACTTGGAATTTGCCTGTTGTGCTGCCATTCCTGGTGGAGGTAGAAACAAGGAATACGCAATGCACCTTTTACACATGTGTGCGGGAAATATTCACGAAGCGATGTTACGTCTAATGCAACCATCACCAAGTTTACCTGCAGATCACCCCCTACTGGCCTATTCTTACAATGAAAGTGACAAGTGGACCTCTGCTGAAACTGAACTATTTCATCGCTGTCTGATGAAATATGACAAAGATTTTAACAAAATAGCAGAAGAAgttaaaacaaaaacagttaAGCAATGCGTCCAAttctattatgtatggaaaaaagTATGCGCAGATGAATATAGTAGACTTAAAACCATCAGGCAAATGAAACGTAACCATAAAAACATTTCTGAATCAGACGACAAGCCATATCCTGATGTGAGGTTATTAGGGattGCCGATAGTGAATCGCCAATGAGAAATTTTCTATGCGAATATCCAGATTGCTCCGCTAGTTTCAATTCTCGCGCCGCCCTTAACGGCCACATCCGCATACATGGCGGCACTGCGCGGAACTCGCCCACGCCATCTGTCTCTGAACGACGAAACTCGTCGTCGTTCTCGGTCAGCTCAACCATCTGCCATCCCGATTCCACCGATCAAGAGTATCCCTGTAAGATTTGCGGGAAAGTATTTCCAAAAATCAAGAGTCGAAGCGCGCACATGAAATCTCACAGGCCACCTGATGCCGAGCCAGTAAAACGTCGCAACAGCGAAAACAAAGAACCCAAGGAACCTAAGGAAGTTAAGGACTTCACTACGAATAGCTACGAAATCTCCGTGCCAAGCCCTTTTAGTTTGTAG
- Protein Sequence
- MNKRPKGRPKRIWKKDINELKDPDNKKVDKKEQTGPPLQTASSSVRALIEEKIISKRNSSPSTTHHPEPVTHTSSATQVDMDSKISSFVVPAPPQQNLDKSRRHSDAEALKNSKSYQEAQAVADLILKREKISVKRTASDPGQSSSHLLQYRSDSFSLDSVDMYQNDEPHFVTPSLEDEVFTNNSMMLQSVDPSQLSQIPFQPDTLDDNLLHIKDDNLLHIKEENLLDMKNEGEEQLQELSLDDIASLHEEPMNISQQTIHSINPVNQDLQAVLNSPLPESLAEFSTYHTSKNLEIHSPNYNTQSPAHYAKSPHTYTAQSPLQSPMIRHDSPGFAYPTPPASHEGQSPCFSQNMSVPLVSPSDDFGQVVERGLDEPPQASSPLSAAFYTSTMSSSAAVEEAIQEILPGESIHEDSLYPLSNTPPSQSENDSLGLTTPVPSPRVVSTSLPSPHPGNAFSPSPKAGCQTSGLGNQWGAPTTLMLPNSDDPLLSSQPKDFVPKKRIQLNGVPVRLISNNGLIELNSTNFTGLLLDANGEIKLIQTGGGGLPTKNFVMTNAQLVTTTTANQDPGSKDKPKVQKVTVAKAVQHPSSIKLVTNRNKTLVDAKREECNNIFLSPTTIPTNSPMKPARKRLRTEPLQLPVFHQSKLRATRSKPQGSAQYTPQPILNPQRIGTGLYVNLKQKSNEDGTTWNSDPIPETDSTPHINIGAQYQCSIPSYRSVPRRTSPEPAYEDLLWDPGIGMCTDSEVDMYLEFACCAAIPGGGRNKEYAMHLLHMCAGNIHEAMLRLMQPSPSLPADHPLLAYSYNESDKWTSAETELFHRCLMKYDKDFNKIAEEVKTKTVKQCVQFYYVWKKVCADEYSRLKTIRQMKRNHKNISESDDKPYPDVRLLGIADSESPMRNFLCEYPDCSASFNSRAALNGHIRIHGGTARNSPTPSVSERRNSSSFSVSSTICHPDSTDQEYPCKICGKVFPKIKSRSAHMKSHRPPDAEPVKRRNSENKEPKEPKEVKDFTTNSYEISVPSPFSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01240591;
- 90% Identity
- iTF_00376749;
- 80% Identity
- iTF_00376749;