Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0035 31 6.2 0.2 7 15 2 10 1 15 0.82

2 13 0.00047 4.2 9.0 0.3 4 15 23 34 22 39 0.77

3 13 0.0014 13 7.5 0.3 4 15 47 58 46 63 0.77

4 13 0.0014 13 7.5 0.3 4 15 71 82 70 87 0.77

5 13 0.0014 13 7.5 0.3 4 15 95 106 94 111 0.77

6 13 0.0014 13 7.5 0.3 4 15 119 130 118 135 0.77

7 13 0.00047 4.2 9.0 0.3 4 15 143 154 142 159 0.77

8 13 0.0014 13 7.5 0.3 4 15 167 178 166 183 0.77

9 13 0.0014 13 7.5 0.3 4 15 191 202 190 207 0.77

10 13 0.0014 13 7.5 0.3 4 15 215 226 214 231 0.77

11 13 0.0014 13 7.5 0.3 4 15 239 250 238 255 0.77

12 13 0.00047 4.2 9.0 0.3 4 15 263 274 262 279 0.77

13 13 0.00081 7.1 8.3 0.4 4 19 287 303 286 310 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0035	31	6.2	0.2	7	15	2	10	1	15	0.82
2	13	0.00047	4.2	9.0	0.3	4	15	23	34	22	39	0.77
3	13	0.0014	13	7.5	0.3	4	15	47	58	46	63	0.77
4	13	0.0014	13	7.5	0.3	4	15	71	82	70	87	0.77
5	13	0.0014	13	7.5	0.3	4	15	95	106	94	111	0.77
6	13	0.0014	13	7.5	0.3	4	15	119	130	118	135	0.77
7	13	0.00047	4.2	9.0	0.3	4	15	143	154	142	159	0.77
8	13	0.0014	13	7.5	0.3	4	15	167	178	166	183	0.77
9	13	0.0014	13	7.5	0.3	4	15	191	202	190	207	0.77
10	13	0.0014	13	7.5	0.3	4	15	215	226	214	231	0.77
11	13	0.0014	13	7.5	0.3	4	15	239	250	238	255	0.77
12	13	0.00047	4.2	9.0	0.3	4	15	263	274	262	279	0.77
13	13	0.00081	7.1	8.3	0.4	4	19	287	303	286	310	0.72

Coding Sequence: ATGTGCGATGGTCGCGGTCACTTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACGTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACTTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACTTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACTTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACTTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACGTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACTTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACTTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACTTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACTTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACGTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGTACTCACTACAACAATGTGCGATGGTCGCGGTCACTTTACTAACGAGATGCACAGCACTGATGTCGCAGTTGATTCATGTTTGTTACCCGACTACCTCAAGCCCAAAGGATAG
Protein Sequence: MCDGRGHFTNEMHSTDVAVVLTTTMCDGRGHVTNEMHSTDVAVVLTTTMCDGRGHFTNEMHSTDVAVVLTTTMCDGRGHFTNEMHSTDVAVVLTTTMCDGRGHFTNEMHSTDVAVVLTTTMCDGRGHFTNEMHSTDVAVVLTTTMCDGRGHVTNEMHSTDVAVVLTTTMCDGRGHFTNEMHSTDVAVVLTTTMCDGRGHFTNEMHSTDVAVVLTTTMCDGRGHFTNEMHSTDVAVVLTTTMCDGRGHFTNEMHSTDVAVVLTTTMCDGRGHVTNEMHSTDVAVVLTTTMCDGRGHFTNEMHSTDVAVDSCLLPDYLKPKG*

Sequence clustering based on sequence similarity using MMseqs2