Basic Information

Insect: Cosmia trapezina
Gene Symbol: -
Assembly: GCA_905163495.1
Location: LR991047.1:8042828-8062438[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.17 23 7.2 4.1 1 23 361 382 361 382 0.90

2 32 0.33 45 6.3 0.7 2 23 453 474 452 474 0.96

3 32 0.00034 0.046 15.7 0.9 1 23 478 500 478 500 0.95

4 32 0.029 4 9.6 0.3 1 23 505 528 505 528 0.90

5 32 0.021 2.9 10.0 0.5 2 23 536 558 536 558 0.94

6 32 0.0046 0.63 12.1 1.4 2 23 566 587 565 588 0.94

7 32 0.0013 0.17 13.9 0.2 2 23 595 616 594 616 0.95

8 32 0.00081 0.11 14.5 0.8 1 23 622 644 622 644 0.97

9 32 0.0019 0.26 13.3 1.0 1 23 650 673 650 673 0.92

10 32 0.49 67 5.7 0.8 1 23 714 737 714 737 0.96

11 32 0.0036 0.49 12.4 3.0 1 23 759 781 759 781 0.97

12 32 0.0057 0.78 11.8 2.6 1 23 785 807 785 807 0.96

13 32 0.029 4 9.6 1.1 1 23 813 836 813 836 0.94

14 32 0.036 4.9 9.3 0.2 2 23 844 866 844 866 0.91

15 32 2.2e-05 0.003 19.4 2.6 1 23 873 896 873 896 0.97

16 32 0.0023 0.31 13.1 2.8 1 23 902 924 902 924 0.98

17 32 3.1 4.3e+02 3.2 0.1 1 10 930 939 930 942 0.89

18 32 2.5 3.3e+02 3.5 0.2 1 22 1087 1108 1087 1110 0.88

19 32 6.2 8.4e+02 2.3 0.3 1 23 1263 1286 1263 1286 0.88

20 32 0.2 27 7.0 0.0 2 23 1312 1334 1311 1334 0.96

21 32 0.023 3.2 9.9 0.1 2 23 1357 1378 1356 1378 0.96

22 32 0.00012 0.016 17.1 1.7 1 23 1382 1404 1382 1404 0.97

23 32 0.056 7.5 8.7 0.5 1 23 1409 1432 1409 1432 0.97

24 32 6.4 8.7e+02 2.2 0.2 2 12 1440 1450 1440 1462 0.81

25 32 0.14 20 7.4 0.4 1 23 1503 1529 1503 1529 0.88

26 32 0.024 3.2 9.9 0.7 2 23 1598 1619 1597 1619 0.96

27 32 1.9 2.5e+02 3.9 0.7 1 23 1623 1645 1623 1645 0.92

28 32 7.2 9.7e+02 2.1 3.4 1 23 1650 1673 1650 1674 0.89

29 32 7.8 1.1e+03 2.0 3.3 1 14 1679 1692 1679 1702 0.81

30 32 0.035 4.7 9.4 0.9 2 23 1710 1732 1709 1732 0.96

31 32 8.1e-05 0.011 17.6 1.3 1 23 1738 1760 1738 1760 0.98

32 32 0.0056 0.75 11.9 3.0 1 23 1766 1788 1766 1788 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.17	23	7.2	4.1	1	23	361	382	361	382	0.90
2	32	0.33	45	6.3	0.7	2	23	453	474	452	474	0.96
3	32	0.00034	0.046	15.7	0.9	1	23	478	500	478	500	0.95
4	32	0.029	4	9.6	0.3	1	23	505	528	505	528	0.90
5	32	0.021	2.9	10.0	0.5	2	23	536	558	536	558	0.94
6	32	0.0046	0.63	12.1	1.4	2	23	566	587	565	588	0.94
7	32	0.0013	0.17	13.9	0.2	2	23	595	616	594	616	0.95
8	32	0.00081	0.11	14.5	0.8	1	23	622	644	622	644	0.97
9	32	0.0019	0.26	13.3	1.0	1	23	650	673	650	673	0.92
10	32	0.49	67	5.7	0.8	1	23	714	737	714	737	0.96
11	32	0.0036	0.49	12.4	3.0	1	23	759	781	759	781	0.97
12	32	0.0057	0.78	11.8	2.6	1	23	785	807	785	807	0.96
13	32	0.029	4	9.6	1.1	1	23	813	836	813	836	0.94
14	32	0.036	4.9	9.3	0.2	2	23	844	866	844	866	0.91
15	32	2.2e-05	0.003	19.4	2.6	1	23	873	896	873	896	0.97
16	32	0.0023	0.31	13.1	2.8	1	23	902	924	902	924	0.98
17	32	3.1	4.3e+02	3.2	0.1	1	10	930	939	930	942	0.89
18	32	2.5	3.3e+02	3.5	0.2	1	22	1087	1108	1087	1110	0.88
19	32	6.2	8.4e+02	2.3	0.3	1	23	1263	1286	1263	1286	0.88
20	32	0.2	27	7.0	0.0	2	23	1312	1334	1311	1334	0.96
21	32	0.023	3.2	9.9	0.1	2	23	1357	1378	1356	1378	0.96
22	32	0.00012	0.016	17.1	1.7	1	23	1382	1404	1382	1404	0.97
23	32	0.056	7.5	8.7	0.5	1	23	1409	1432	1409	1432	0.97
24	32	6.4	8.7e+02	2.2	0.2	2	12	1440	1450	1440	1462	0.81
25	32	0.14	20	7.4	0.4	1	23	1503	1529	1503	1529	0.88
26	32	0.024	3.2	9.9	0.7	2	23	1598	1619	1597	1619	0.96
27	32	1.9	2.5e+02	3.9	0.7	1	23	1623	1645	1623	1645	0.92
28	32	7.2	9.7e+02	2.1	3.4	1	23	1650	1673	1650	1674	0.89
29	32	7.8	1.1e+03	2.0	3.3	1	14	1679	1692	1679	1702	0.81
30	32	0.035	4.7	9.4	0.9	2	23	1710	1732	1709	1732	0.96
31	32	8.1e-05	0.011	17.6	1.3	1	23	1738	1760	1738	1760	0.98
32	32	0.0056	0.75	11.9	3.0	1	23	1766	1788	1766	1788	0.97

Sequence Information

Coding Sequence: ATGGAAAAAACTGAGATAGAGACGTTTTTTGGTAGATGTAGGTGTTGTCTCTCCTATGGATACTTAAAAAACATGTGGGAAGAACATCTATTTGAAGGAGAAGCAGAAATCTACGGCGAGATGCTTGTCCAATGTTTTGCACTGACTtgggatcATTCGGAGGACTCGATGGAACAGGATCAGATCTGCGAGCAGTGCATCTGTCGGTTGCGAGATGCTAGTGACTTTAAGAGGGTGGTCTTAGACTCACAAGAGGAACTGTTCAAGCAGATAGATGCTGAAAATGAATTGAACATCAAAGAAGAACTACTAAGTGAGGAGTTCCTCATAGAGGATAAAGATCCTGAGATCGAAGGCTCTGCGGACGTTACATACGATGACACAGAATACACTGTATACACTATGGACTCCGCAGATACTGTTACAAGTGTCAAAGATGAGACGGAGTATGAAGAGGTTGAGTATTTGGAAGACGAAGATGCTGGTGGAGCTATTGATGCTGTTGATACTGACTCCTCACAACCAACAGATCAATCAAGACCAGCAAAACGGCGGAGCCAATCTCGCAAACAAGACACAGATGAGGACGACGCGCCGAAACGGAAGTGGCCCAAAAAGCTGCCCAAATCAGAACGCCACAAGACTTACAAACAATACTCTGAGGTTGATCTTCGCAAATGTCTGGAAGAAGTCAGGAACAATGTTCTGACGGCTGGTGATGCGGCTTTGAAGTATGGTATACCGAAGAAGACTATTTGTGCCAAGATTAAAGTGGATCCTAACGATGTCGGGACAGACATCCAGAACTCTATAAACAACACAACTACACGAGTGACAACGAGGCAAAAAGAGGTACCCACACTGTCAAACGAAAATATGAAAGTGATAGACTCGGACACAGAAAGCCAGGAACTACCAAACAAGTACCCACTATCACACGAAAAGGCAAAAGAGACGGACTCGAACACAGAAAGCCAGGAAGTACCAAACAAGTGCCAAATgctaaaacacaaaaataatctCAAAATGATCCTTAAATACTCCAACGCAACATTAATCAAAGGATATTCAGCTGCTGGTTACTCCTGCTGGTTTTGCGACAAGCATTTTaatcccgaaaaactaaaaaagcACAATTTTGAACACGGAGACGTGTACGATGATGCTATAAAAGTAAAATACGTTTCGGATTTAATAATGAAACTTGATGTTACTGGACTTAAATGTAGGCTGTGTGAAGAAGAAATCAATAGTCTCGAAGAATTGATGGGTCATTTCCAAGAAGATCATTACAAAACTATTTATACGGACATAGACAACCATTTTATACCTTTTAAGTTTGATACGGAAGAGTTACAATGCGTAATTTGTGCAGCAGAGTTCAAATATTTCAAACTACTCTCAGAACATATGTGTGAACATTATAGTAACTACAACTGTCCGGAATGTGACCGtgtctttataaataaacaatcaaTGCAAACACATAGTTATAGACACAAGAAAGGAGAATACAAATGTTCACAATGTCCAAAAATCTTCGACAGTCCTATAAAAATACGGGAACACGAATACGTAACTCACAAACTATCGaataaaaagagaaaatgtGGCTTCTGTGACGAGAAATTCTCGTCAGCAGACTTAGTAAAGAATCACGAAGCTAGAAAACATGGCGTCGCTCGTTCTAAGCTTACATGTGAAGCTTGCAACAGGCCTTTCGCTACCCAGAAAGGTCTTGCAACACATAAGAAGAGACACCATTTATTAATGCGTCCTATTGAATGTGAAACTTGTGGGAGAGGGTTTTATACGCGACAAGAACTCAACTGGCATTCCGTCACCCATACAAAGACCAAGGAGTTTCATTGCAATGAATGTGATAACTCGTTTGGCACAAAACCTGCACTAAGTCAGCACTTAAGGGCACATAGAGGCTATAGGAGGTAtaagtgtgaatattgtgatgtGGCGTTTGTTCATATGAGTACTTGGCAAAGGCATGTCTTTTTGCTACATAGGGCCGAAAAACCGTTTGTATTGAAGCAGCATAATCTGGAAAAACACACCGATGTCGGAGACGAAGCCatcaaaacaaaatatgtatCAGATTTGATCATAAAGTTAGATACAACAAATTTCAAATGCAAGTTATGCAAAGAACCTATGAACACTTTAGAAGAGTTTATGGAACATCTAAGTAAAACACACTTGAAACTTATTTATACTGATGTCAAAAATTACATCATTCCTTTCAAATTCGACTCCGACGATTTCAGATGCTTCATGTGTGATAAAAACTTCAAGTATTTCAAGCTTCTCTCCGAACATATGACTGAACATTATCGAAACTTCGATTGTCCTGTTTGCGAACGTAGTTTCATCAATAAACAGTCAATGCATACTCATACTTATAGACACACTAGCGGCGGTATATTCAAATGCTCTTATTGCTCCAAAGAGTTTGATTCTCGACCGAAACGAACCGACCATGAAAGAGCTGTGCATATAGCCGGCATCAAGTATAGAAAATGTGCGCACTGCGACCAACGATTCCCAACTTGGGATGCAGTACTTGACCATGAGCTTAACATACACAGGGTGGCGAAACCCACATACTCATGCGAATTCTGTGGAAAGACTTTTACCAAACAAAGTGGTTTAACAATGCACAAAAATCGTTTCCACTTCTTTAAGAAGCCTCACAAATGTTCCTATTGTGAGATGGCTTTCTGCACGAAAGTGGAGTTGGGCTATCACATTATAACTCATACGAAAACGAGGAATCATATCTGTGAAATTTGTAAGAAGGCGTTCGATGTCCTGATTGACAATACAACGATATCCAAATTGGAACGATCTAAAAAGAAACTGAGGAAAATGCCCACCATCTTTAAAACCAAAGCATCTTTTTTggatgaaaaaactaaaaaacttattgagctgaataaattaaaagcaaaaaacttAACAAAACCAGTCGTAACCACAGTAAAAGACGATGAAATGAATATAACCGAAACAAAACTAATCGCCATAGAGATTAATGTGGAGCCTAAGATAGAAGAAATGGAACTTCCAGTGAATGCCGATCAAGTCCGAACGCGATACAAGGCTATAGTCAACGACAAAttcaagaataaaaataaagagcCCGAGAAATTCGAAGTCAACGAAATGAATAAACACAAAGACAATATAAAGACTATATTACAAAATTCTAATGCGACCATCATCAAAGGATTTTGGGGAACCGGTTATTCTTGTAACTTTTGCGACGAACAGAGAGAAATACCTTCAGAATTAAAGCTGCATAATTTAGAAGATCATAGCAATGTAGGAGACGAAGCTATTAAAGCAAAATATGTATCAGATTTAGTTATAAGACTAGACGTTACTGAACTTAACTGCAAACTATGCAACGCAAtgtggtgtcgcgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatggtgataatgatgatgatgatgaagatgatggtgatgatgatgatgatgatgATGCCCATCGGAATAAAAACGCTACAGAGAGTGAAAATGGCAAAGCTATGAGCAACGTACAGAAAAACAAAGCGCAGGCGAATAAAAACACTACACAGGCTGAAGATGAGAAAGATATGAACAGCATACAGAAAAACAGGAACCTTTTGGCAAATTTCAAAGAGAGCGTACGTACTGTCCTTAGATACACGAACGCTACACCAGTCCGAGGTTACTGGGGCATCGGATATGCTTGCATCTACTGCAAGTATCAAACCCCTGCAATTTCAGCACTGAAAAAGCACACACTGACAACACATTCCGAAAATGTTGACGAACTTGACAACGTGAAATACGTTTCAGACATGATAATTAAACTAGACATTACAGATCTCAAATGCGAGGTATGTGACCGTGAAATAGAAACCCTTGAAGAAATCATGAATCATATAAAAGTAATTCACAGGAAACCCATACATTTAGACGCTACGAAACATATCATTCCGTTTAAATTCGGAAAAAATGATTTATCTTGCGCTATTTGCGATGAACAGTTTAATTATTTCAAGCCTTTATCTGAACATATGAATGTGCACTTCCCCAACTATACGTGTAAGGAATGCAATCGTTATTTCATCAACCAACGCTCTTTACGAAATCACGCGATCAGACATCAAACAGGCACGTTCGTCTGCGCGTTCTGTTCCAAAATCTTTTACACCCGAATCAAAATGATGGAACACGAAAGAGTCTTACACCTAAGAGGTTCTAAAAATCGTAAATGTGGGTATTGTGACGAGAGATTTATGGATGCTTTAAGGAAGACGGAACATGAGGTGAAGGAGCATGGCGCTCCAGTTCGCGGCGAAGTGGACTCAAATCGAGAGAAGATGTACCAACTCATAAAAGAAATCAAAGCTATTCTAACATTCACGAACGCGACCCCTTACAAGTCGAAGAACGTTCGCTATTACTGCGCGTATTGCTCCACAGACGGACCCCATTTCGAAGACCCCGACGACCTCCGAACCCACACAAGGACCGAACACGTCGCAGAGAAGATAGAATACGCCATGCGACCTTATTGGATGAACGAGGTAATCAAACTTGATATAGAGAACCTCCTTTGTACTGTTTGCTGCGTAGTCATAAACAATTGGAATGATATGTTCAAACATTTGAAAGATAAGCATAGTGTAGTCTTAGATCAAGCGTATACTAGAGTCATTCCTTACGTTTTGAGGACCGATCTTCGATGCGCGCTGTGCAAAGAATCTTTTAGTAATTATCTTCATTTAGACGGGCATATGAACGCtcattacaataattatgtcTGCGATGACTGCGGAGACACTTTTCTAGCCCACAACCGTTTAAAACAGCACGTAAAAATCCATAATGTTGGAAAATTCAGGTGCAGGTTTTGCGTAAAAATGTTTTCTTTAGAAAAATATAGGCGGAAACATGAAGAATTAGTTCATCACCAATTATCTAAGTTCAAATGTCTGCACTGTCCTGAGAGGTTCACAGGTGAGTACCTAAGACACTTGCATTGTCTAGAAAAGCACgcagaaaaaattaaaaccataaCCTGCGAATTCTGTGGGGAAAGTTTTACGTGGAGACAGTACTATTTGAACCATATTAAGAAGAAACATGAGAATAAGAAATCTTATGAGTGTGACAAGTGCGATAAGAAATTTTTTGGGAGTTATGAGCTAAAAGAACATTTGCTAAGACATGTTGGTACTAAGAACTTTGAATGTCAAATTTGTCATAAGAAGTATGTGTCAATGAACTCATTGAAACAGCATGGGAAGCAGCATAAGAAGAAGAATGAAGCATGA
Protein Sequence: MEKTEIETFFGRCRCCLSYGYLKNMWEEHLFEGEAEIYGEMLVQCFALTWDHSEDSMEQDQICEQCICRLRDASDFKRVVLDSQEELFKQIDAENELNIKEELLSEEFLIEDKDPEIEGSADVTYDDTEYTVYTMDSADTVTSVKDETEYEEVEYLEDEDAGGAIDAVDTDSSQPTDQSRPAKRRSQSRKQDTDEDDAPKRKWPKKLPKSERHKTYKQYSEVDLRKCLEEVRNNVLTAGDAALKYGIPKKTICAKIKVDPNDVGTDIQNSINNTTTRVTTRQKEVPTLSNENMKVIDSDTESQELPNKYPLSHEKAKETDSNTESQEVPNKCQMLKHKNNLKMILKYSNATLIKGYSAAGYSCWFCDKHFNPEKLKKHNFEHGDVYDDAIKVKYVSDLIMKLDVTGLKCRLCEEEINSLEELMGHFQEDHYKTIYTDIDNHFIPFKFDTEELQCVICAAEFKYFKLLSEHMCEHYSNYNCPECDRVFINKQSMQTHSYRHKKGEYKCSQCPKIFDSPIKIREHEYVTHKLSNKKRKCGFCDEKFSSADLVKNHEARKHGVARSKLTCEACNRPFATQKGLATHKKRHHLLMRPIECETCGRGFYTRQELNWHSVTHTKTKEFHCNECDNSFGTKPALSQHLRAHRGYRRYKCEYCDVAFVHMSTWQRHVFLLHRAEKPFVLKQHNLEKHTDVGDEAIKTKYVSDLIIKLDTTNFKCKLCKEPMNTLEEFMEHLSKTHLKLIYTDVKNYIIPFKFDSDDFRCFMCDKNFKYFKLLSEHMTEHYRNFDCPVCERSFINKQSMHTHTYRHTSGGIFKCSYCSKEFDSRPKRTDHERAVHIAGIKYRKCAHCDQRFPTWDAVLDHELNIHRVAKPTYSCEFCGKTFTKQSGLTMHKNRFHFFKKPHKCSYCEMAFCTKVELGYHIITHTKTRNHICEICKKAFDVLIDNTTISKLERSKKKLRKMPTIFKTKASFLDEKTKKLIELNKLKAKNLTKPVVTTVKDDEMNITETKLIAIEINVEPKIEEMELPVNADQVRTRYKAIVNDKFKNKNKEPEKFEVNEMNKHKDNIKTILQNSNATIIKGFWGTGYSCNFCDEQREIPSELKLHNLEDHSNVGDEAIKAKYVSDLVIRLDVTELNCKLCNAMWCRDDDDDDDDDDDDDDDDDDDDDDDGDNDDDDEDDGDDDDDDDAHRNKNATESENGKAMSNVQKNKAQANKNTTQAEDEKDMNSIQKNRNLLANFKESVRTVLRYTNATPVRGYWGIGYACIYCKYQTPAISALKKHTLTTHSENVDELDNVKYVSDMIIKLDITDLKCEVCDREIETLEEIMNHIKVIHRKPIHLDATKHIIPFKFGKNDLSCAICDEQFNYFKPLSEHMNVHFPNYTCKECNRYFINQRSLRNHAIRHQTGTFVCAFCSKIFYTRIKMMEHERVLHLRGSKNRKCGYCDERFMDALRKTEHEVKEHGAPVRGEVDSNREKMYQLIKEIKAILTFTNATPYKSKNVRYYCAYCSTDGPHFEDPDDLRTHTRTEHVAEKIEYAMRPYWMNEVIKLDIENLLCTVCCVVINNWNDMFKHLKDKHSVVLDQAYTRVIPYVLRTDLRCALCKESFSNYLHLDGHMNAHYNNYVCDDCGDTFLAHNRLKQHVKIHNVGKFRCRFCVKMFSLEKYRRKHEELVHHQLSKFKCLHCPERFTGEYLRHLHCLEKHAEKIKTITCEFCGESFTWRQYYLNHIKKKHENKKSYECDKCDKKFFGSYELKEHLLRHVGTKNFECQICHKKYVSMNSLKQHGKQHKKKNEA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -