Ctra038662.1
Basic Information
- Insect
- Cosmia trapezina
- Gene Symbol
- SMARCC2
- Assembly
- GCA_905163495.1
- Location
- LR991042.1:11022421-11051292[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-15 9.8e-12 46.3 0.1 3 44 517 558 515 560 0.95
Sequence Information
- Coding Sequence
- ATGAAAGCGTTCATGGACATGAAGCCGGGCGGGTCCTTATGCACGGTGCTTTCCACCATGTTCCGTTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCCTCCCGCAAGGACCTGAACGTGCAGATGATGATGGAGATTGAGTCCTCACTGCTAGGCGCTGACGTCATCCGCTCGCCGTGCATCTTCATACGACCGGAGGTTGATAAGGCGACCGCTAACAAAGTGAAGGATATCATTGTCAATCATCAGGGGGAGATTTGCGAAGACGAAGAGGAAGCGACGCATATCGTGTACCCGACCGTGGACCCCTTAGAGGAGGAGTACGCGCGGCCGGTTGTCCGCCGCTCCAACCACGTGCTGGTGCACTGGTACTACCTGCCCGATAGCCACGACACCTGGGCGCAGACTGAGCTGCCGGTGGAAGTGCCTGAGACAGTGAGCTGGGAGTGCAGCCGGTCAGAGCCGTGGCGCGTGTCGGCGTCGTGGGCGCTCGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGCTCGACGCCAACGGCAAGAAGAAGGTCCACAAACTGCGTCTATCAGTGGACGATCTGATCCCGGGCGGGGAGCCGTCGAGCAAGTCCAAGAAAGGCAGTAAGAGGAAGCGCTCGCCGTCGCCACCGCCACAGAAACATGGCAAGAGAAAGAGTCGTACAACGAAGCGTCGTGAAAATGACGTCGACGAAGAAGAGGACAACGCGTCAAGAGATAACACTGACGCTGCGCCCACGCCGGAGAGCGAGCGACCTGCTGAGCCGGCTCCAAGCGCTTCAGCTGCTGCAAGCGAGCCGCCGCCGCCCACCGACGCGCCTACCACGCCTGCGCCGCCGCTCGACGCGCACGACGACTCGCAGGGCAAGCACAGTGACTCCAACACGCAGGAAATGCTAACTAAGGAGGAGCTAGAAGACAACGTGACGGACCAGACGCATCACATCGTGGTTCCGTCGTACTCTGCATGGTTCGACTACAACTCCATACACACGATTGAAAAGCGCGCGCTGACAGAGTTCTTCAATGGAAAGAACAAGTCCAAGACACCAGAAATTTATCTGGCTTACAGaAACTTCATGATAGACACTTACCGTCTGAACCCAACCGAGTACCTGACTAGCACAGCGTGTCGCCGCAACTTGGCAGGAGATGTGTGCGCCATCATGCGTGTGCACGGCTTCCTTGAGCAGTGGGGCCTCGTCAACTATCAGCTGGAGGCGGAGTCGCGGCCCACGGCGATGGGTCCGCCGCCCACGTCGCACTTCCACGTGCTGTCCGACACGCCGTCCGGCCTGCAGCCGCTCGTCACGCGGCCCACGCAACCGCGACCGGcgGAGAATGTGCCAAAGGTGGAGCCAGGTCTGCCCAACGGCGCCGAGGCGGGAGCGGCAGCCGCGCCACCCGTGCCGCCCATCAAGCCGGAACCTACGCTGGACCTTGCTGCTGCGTCTGGGCTCAAGCTCGACCAGTACCGCGGCGGCGTCCGCGGTCGCGCCTGGACGGAACAAGAGACCCTGCTGCTCCTGGAGGCGCTGGAACTGCACCGCGACGACTGGAACCGAGTCGCCGCGCACGTGGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTATCTGCACGACGCGCAAACTGGTGGCGTGCTAGGCCCGCTAGCCTACCAGCCGATCCCGTTCAGCAAGACTGGCAACCCAGTGATGTCCACCGTGGCTTTCTTAGCGTCTGTGGTGGACCCGCGCATCGCCTCCAAGGCAACACGGGCAGCTATGGAAGAGTTTGCTGCTATCAAGGACGAAGTGCCCGCGGCCATGATGGAAGCGCACGTGAAGGCGGCGGGTGCGCACGGGCCTGGCGCCGCGCTCGCCGCCACCGGCATCGCCGGCACCGCGCCCGAGGGAGCGCCCTCAGCTGAACCCAAGAAGGAGGGTACATCGGATATCAAGGCGGAGCCCATGGAGGTGGAAGAGGCCGAGCTCAAGGTGAAGGACGAGCCGCAAGAAGCGCCCGCAGCCCCAGAGACGGACAAGGAACCCAAGGAGGAGCCTGCTGCTCAACCTGaaaaaaccGAAGCCTCAACGACGGTAGACGCGAAACTGCAATCTGCAGCCGCTGCAGCGCTGGCCGCGGCCGCAGTCAAAGCGAAGCATCTCGCCGGCGTCGAGGAACGGAAGATCAAGTCCCTGGTCGCGTTGTTAGTGGAGACGCAGATGAAGAAGTTGGAGATCAAGCTGCGGCACTTCGAGGAGTTGGAGGCCACCATGGAGAGGGAACGGGAAGGACTGGAGTACCAGCGTCAGCAGTTGATTCAGGAGCGACAACAGTTCCATCTGGAACAGCTGAAGGCTGCAGAGTTCCGTGCAAGGCATCAAGCGCATCAGAGGCTGCAAGCAGAGAGCGGCGCAGGCGCAGTGGCGGCGCCGGGCGCGGTGGCGGGCGCGGCTCCGCCGGGCGCTGCGCCGGCCGACGCGCCGCCCGAGCCCACGCCGCCGCCGCACGCGTAG
- Protein Sequence
- MKAFMDMKPGGSLCTVLSTMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGADVIRSPCIFIRPEVDKATANKVKDIIVNHQGEICEDEEEATHIVYPTVDPLEEEYARPVVRRSNHVLVHWYYLPDSHDTWAQTELPVEVPETVSWECSRSEPWRVSASWALDLPQYNEWMNEEDYELDANGKKKVHKLRLSVDDLIPGGEPSSKSKKGSKRKRSPSPPPQKHGKRKSRTTKRRENDVDEEEDNASRDNTDAAPTPESERPAEPAPSASAAASEPPPPTDAPTTPAPPLDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALTEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLVNYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAAAAPPVPPIKPEPTLDLAAASGLKLDQYRGGVRGRAWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLHDAQTGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPGAALAATGIAGTAPEGAPSAEPKKEGTSDIKAEPMEVEEAELKVKDEPQEAPAAPETDKEPKEEPAAQPEKTEASTTVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGAGAVAAPGAVAGAAPPGAAPADAPPEPTPPPHA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00040769;
- 90% Identity
- iTF_00122340;
- 80% Identity
- -