Ctra034919.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cosmia trapezina
Gene Symbol
ct
Assembly
GCA_905163495.1
Location
LR991039.1:24163749-24199213[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.7e-27 8.3e-23 81.7 0.0 3 70 220 288 218 294 0.94
2 3 5.5e-32 9.7e-28 97.5 0.0 4 77 619 693 617 695 0.96
3 3 7.9e-31 1.4e-26 93.8 0.0 3 75 824 897 822 901 0.95

Sequence Information

Coding Sequence
ATGGCCCAAGACTCGACCATTTGCATCGGAAGGAACACGGCTAAGAATGCGAGGCGACGCACGCAGGCCATCGCCCAACTAGTGGAAGACGTGCGTCGTCTCCAAGCATCGCTTACAGCGCTGCAGGAAGCGCACGCGCAGCAGCTGCAGCGGTTAGAAGAAAGGCTGGACGAGAAGAAGCAGCACATCGCCAGGCTTGAAGCGAGGCTCGACACGCAGAGGGACTATGATGATGTCAAAAGAGAAATCAGCATGCTCCGAGCACTCGACCTGGGCGGTGGAGAGCGATCTTTAGAGCGCAAGCCTGAGATCCGCTCGCCGAGCACCGCACCTTCGCTCCGAGACCATTCGGCCGAGCGGGAAAGAAGCGCTGAGCGCCGGGATACAGGTGTGGAGGAGTGGCCCAGCACGCCGCCGCCGCTCAACAACAACACCACGCACCACAACAACAACGGGCCCACGCCGCTGCTGCCGCTGCCGCCACCGAGCCCCTTCCGCTTCGAGGAGCACCGCACCTACAGGTTCGCGGAGGACATGGGGCCCCTGCCGCCCGGCGCGCTGGTCGGACGCCTCGGCGACTCCCTCATCCCCAAAGGCGACCCAATGGAGGCGCGATTGCAGGAGATGCTAAGATACAACATCGACAAATACGCGAATACGAACCTGGACACGTTGCACATAAGCCGGAGAGTGCGGGAACTGCTATCGGTCCACAACATTGGCCAGAGACTGTTCGCTAAGTACGTGCTGGGGCTGTCTCAAGGGACGGTGTCAGAGCTGCTGTCGAAGCCGAAGCCCTGGGACAAGCTGACAGAGAAGGGGCGCGACTCGTACCGCAAGATGCACGCGTGGGCCTGCGACGAGGCCGCCATCATGCTGCTCAAGTCACTGATCCCTAAAAAAGTTGGGACGAAGGATGGCACCGGCGCAGCGTTCGGTCGGCCGGAGGGTGAGGGGGACGACAGGCTCACGCACGCGATCCTGAGTGAAGCGCATCTCATGAAAACGTCCAGCGGACCTCCCCACAATGATGACTCCAGAAGCAATGAGGACTCTAGCTCGCCGAGGACTCAGTGTCCCTCACCTTTCTCTAATAAGGACGGGAGTCAAAACAGAAGACTCAAGAAGTACGAGAACGACGACATTCCTCAAGAGAAGGTGGCGCGCATATACCAGGAGGAGCTTGCCAAAATCATGACTAGGAGAGTCGAGGATATTCGCCGCGAAGGGTTTCCTGGCATgtttcctccttttttcagCGGCGGCATGCCACCACACATGGAGAGGCCTCCGGAAGACATCCGCATGGCCCTGGAAGCGTACCACAGAGAACTTGCCAAGATCCAGCCGGCTGGCAATATTCCCAACCTCCACAACTTGCCGGCCATGCCGCCCTTTCCGAACCTCCTCGCGTTGCAACAACAAGCGATGCAACAAGCACAGAACCAACAGATGAACGGCTCAGGAGCGGTCCAAGATCTCTCTTTGCCTAAAGATAAAAACGCCAAAATGAATGGAATGACTGATAGTGATAAGGATAGGTCGATGGATGCCGAAGAGGCTATTAGGCACGCGGGGAGCGCATTCTCGTTAGTAAGGCCAAAACTAGAGCCGGGACAGCAATCAACGGGATCGTCCGCTTCCAGTCCACTTGGGAACGCGATACTGCCACCCGCAATCACTCCAAATGAGGACTTCAGTAACTCAGCGGCGGCAAGCCCACTACAGAGGATGGCTTCGATCACGAACAGTCTCATCTCCCAGCCATCAAATCCTCCTCATCATCCACCTGTACAGAGGTCGATGAAAGCAGTTCTTCCACCAATCACACAGCAACAATTTGATCTCTTTAACAACTTGAATACAGAAGATATCGTGAGGAGAGTGAAAGAGGCTCTGAGCCAGTACTCCATTAGCCAAAGACTGTTCGGAGAATCCGTCCTTGGTCTATCGCAAGGATCCGTGAGTGACTTGCTAGCGCGGCCGAAGCCCTGGCACATGCTCACGCAGAAGGGACGAGAGCCTTTCATCCGCATGAAGATGTTCTTGGAGGATGACAATGCTGTCCACAAGTTGGTTGCATCACAGTACAAAATCGCGCCGGAAAAACTAATGAGGACTGGAAACTACAGCGGAGCACCTCCATGTCCGCCAAATATGAACAAACCCATGCCGCCAACACAGAAGATGATTTCCGACGCGACCTCCCTGCTGAGCAAGATGCAGCAGGAGCAGCTCCTGGGTGCGGGTCACCTGGGTCACCTGGGGCAGCCCACGCCGCTGCTGCTGACGCCACCCGGCTTCCCGCCGCACCACGCCGTCACGCTGCCACCGCAGCACCACGACAACAACAACAAGGAGCGCAAGCCCCCGCCGCCGCCGCACCCGCACCCGCACCACCAGCCCCCCGTTATGCGCAGCCTGCACCAGCACATATCGCCGAGCGTCTACGAGATGGCCGCACTCACCCAAGACCTAGACACGCAAACCATTACGACCAAAATAAAGGAAGCGCTACTGGCAAATAACATTGGCCAGAAAATCTTCGGAGAAGCTGTTCTAGGTCTATCACAGGGTTCTGTCAGTGAATTGCTATCAAAACCGAAACCCTGGCACATGCTCAGCATTAAGGGTAGGGAACCATTCATTCGCATGCAACTGTGGTTAAGCGATGCCCACAATATTGACCGCCTGCAGGCTTTGAAGAATGAGCGACGAGAAGCGAGTAAACGACGACGGTCAAGTGGCCCCGGGCAAGATAACTCGTCTGACACATCGTCGAATGATACGTCAGAGTTCTACCATTCGAGCTCGCCGGGCCCCACCGCGGGAGCGCCGTGTGCCAAGAAACAACGAGTACTGTTCTCCGAAGAGCAAAAGGAGGCACTCAGATTAGCATTCGCACTCGACCCCTACCCAAACATGCCAACGATCGAATTCCTCGCCGCAGAATTGGGTCTATCATCGCGAACCATCACCAACTGGTTCCACAATCACCGCATGCGGCTAAAACAACAAGCACCTCATGGCTTGCCGGCCGAGCCTCCCGCGCGGGATCAATCCTCGGCGCCTTTCGACCCAGTCCAATTCCGTCTTCTCCTCAATCAGAGACTACTGGAACTTCAGAAGGAGAGGATGGGTCTCGCTGGCGTACCCCTACCGTACCCTCCGTACTTCGCGGCCAACTCCAACTTAGCGGCGCTAATTGGCCGCGGGCTAATACCCTCCGAAGACCAGGTGAAAGACCAGTCTGGCGGCCTCGACCTCTCGATGCCGCTGAAACGGGAACACGATGGTGATGACTTTGAGGACGATGACGTCGAGAGCAACCTCGGCTCCGAGGACTCGTTGGACGAGGAATCTAAGACTGAGCCCAAAGCGGCGTCGACGCCGCACGCTGCAGGAGGCCGCTCCAGCAGGCGCAAGCCAGCCGCGCCGCAGTGGGTCAACCCGGACTGGCAGGACGAGAAGCCGCGCAACCCTGACGAAGTCATCATTAATGGAGTTTGTGTGATGCGAAGTGACGACTTCCGGAGAGAGGCGGAGGAGACGGTGCGAGTGGAGCCGTCGCCGGTGGCTCGCGAGAGCTCGCCGGCTGCGTCACCTGCGCCGCGCACGCCGCACACGCCGCTCACGCCGCACACGCCTCACACGCCACACACGCCGCACACGCCGCGCCCGCCACACACGCCCGACGATGTGATCCCCGAAGACAAAATCAAATCCGAGACCGACGACGGCTGGGAGTACTAA
Protein Sequence
MAQDSTICIGRNTAKNARRRTQAIAQLVEDVRRLQASLTALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDVKREISMLRALDLGGGERSLERKPEIRSPSTAPSLRDHSAERERSAERRDTGVEEWPSTPPPLNNNTTHHNNNGPTPLLPLPPPSPFRFEEHRTYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNIDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTGAAFGRPEGEGDDRLTHAILSEAHLMKTSSGPPHNDDSRSNEDSSSPRTQCPSPFSNKDGSQNRRLKKYENDDIPQEKVARIYQEELAKIMTRRVEDIRREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPAGNIPNLHNLPAMPPFPNLLALQQQAMQQAQNQQMNGSGAVQDLSLPKDKNAKMNGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFSNSAAASPLQRMASITNSLISQPSNPPHHPPVQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGAGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPHPHPHHQPPVMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPSEDQVKDQSGGLDLSMPLKREHDGDDFEDDDVESNLGSEDSLDEESKTEPKAASTPHAAGGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVARESSPAASPAPRTPHTPLTPHTPHTPHTPHTPRPPHTPDDVIPEDKIKSETDDGWEY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_00445005;
80% Identity
iTF_00375064;