Ctra024864.3
Basic Information
- Insect
- Cosmia trapezina
- Gene Symbol
- kn
- Assembly
- GCA_905163495.1
- Location
- LR991033.1:9556283-9562116[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-96 2.9e-92 311.4 0.0 249 387 17 156 9 159 0.97 2 2 1.1e-08 0.00015 21.8 1.7 420 468 165 215 157 257 0.84
Sequence Information
- Coding Sequence
- ATGACTGAAATAGCATTTTTGACAGCAGGTTTATATCCTCCTCTACCAGTAGCCACACCATGCATCAAGGCGATATCACCGAGCGAAGGCTGGACGTCGGGAGGGTCGACAGTGATCATAGTAGGAGACAACTTCTTCGACGGACTACAGGTTGTGTTCGGAACCATGTTGGTTTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTGCAGACCCCTCCGCGACACATACCGGGCGTCGTGGAGGTAACGCTTTCCTACAAGAGCAAGCAGTTCTGCAAGGGCGCGCCAGGGAGATTTGTTTATGTTTCAGCGTTGAACGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCAAGACATCCCGGGGACCCGGAAAAATTACCTAagGAAATAATCCTAAAACGAGCGGCGGACTTGGCGGAAGCACTATACTCGATGCCTCGAAACAACCAACTGGGGCTGGGCGCGCCGAGATCACCGCCCGCCAGCATGCCTTTCAACTCGTACACAGGACAACTGGCTGTCAGCGTGCAGGATACTGCAGCCTCGCAGTGGACTGAAGAGGAGTACGCGCGCAGTGGCGGCTCGGTATCGCCGCGGTATTGCTCCGCCGCGTCGACGCCGCATGCCGCGCCTGCCGCCTACCCGCATCCACAACACTATCCAGCTCCGCCGACCTCACTCTTCAATACCACGTCACTGTCTCTAGGACCGTACCATCCGGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAACACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAAAGCCTGGGCGACTGTCCGGTAAACATTCTTACAAAATGCGCCAGCAACGATATGAAAGGGGCTCAGAATAAAGAGAGAATGGGCGGCCTAGTATCATCGCCGTTCAGTGTCAACCCGTTCTCGCTACCAACTTGCAGCGCTCAACAGTATGCTCAGACAGCCCCGCTTGCTTCCAAATAG
- Protein Sequence
- MTEIAFLTAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNGNSKSLGDCPVNILTKCASNDMKGAQNKERMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00237253;
- 90% Identity
- iTF_00237253;
- 80% Identity
- -