Ctra001924.1
Basic Information
- Insect
- Cosmia trapezina
- Gene Symbol
- Kdm4B_1
- Assembly
- GCA_905163495.1
- Location
- LR991019.1:33986865-33998533[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-18 7.3e-15 56.6 0.1 25 89 11 72 3 72 0.92
Sequence Information
- Coding Sequence
- atgaTTATCAGTAATAGAGACTACGTTTTGCAGCTGGATGGTGTCGAGGTAAACTTGCCGAAGTTATACCACCTCGTACAACGGCACGGCGGTCTAGAAACAGTATATAACAAGAATCGATGGGGCAAGGTCGCAGAAGACATGAAATTTAATAAAGGGCCTAATACTGAGAGGAAACTCGACCAGATTTATGTAAAGTATCTGCTACCATACGACACGCTTTCTCATAAGGAGCGCCAGGATATTACGAAGAAAGTTGAGAACGCATGGAACCGAAAGAATCAAAAACTTTTGGACCGCGCCATGAACCCGCTAAACCGCCAGAAGCGATTGCTTGGCTTAATGGACTCTTCTGACGACGAGACAGAAGACGAAGACACGGTGGCCGCTGTCAATGAGGCAGAAGACTGTATCATCAAGGGCGCGGTCATGAACCGAGCAAAATTCAAAAAGATTGCCACGATGACGTACGAGAACACATTCGGACAAGCCTCGGAGTCCGCCCACCCTCCCGAATTGAACAAAATCGAGAAGTATTACTGGCGCCTCGTGACGCAGGGCACCGAGCACGTGTGTGTGCACACTGCGGCCATTGACACCGGCGAAGAAGGCTACGGCTTCATCAAAAATAAGTCTGACTCCTATGGACGCCACCCTTGGAATCCTAAGATGGTTAGCCAGAATCCTCGCAATGTGCTTCAGTATTTGGGACCGGTGTTGGGCGTAACGGTGCCCACTCTGCTGCTAGGAATGCTATTTTCGACGTCTTGCTGGCACAAGGATCCACATGCAGTATCCTGGCTGGAGTACCAGTTGTTAGGACCGGAAAGAATATGGTACGGCATACCAGCAAATCAGGCGTCTAACTTCAGGAATGCTGTAGAATATCTTTGCCCGACATTTTGCCAAAACAAATTTTTGTGGATGTCGTCGGACGTGACGATGATCCCGCCGGACATGCTGCGTGAGCACAACGTGACGTTATCGCGCGTCACGCAGAGGGAAGGCGAGTACATCCTGGCCTTCCCGAACGCTTACACCTGCTGCATCAGCACCGGCTACACTGAATCGGAAAGTGTGTACTTCGCACCGCCATCATGGCTTGAGAGTCTGTGGACAGTCTTCAAGGAGGCCCGAGAAAGTTGCGAGCCGACAATGTTCGCAATGGAACATTTGCTCTACAACATAGGCAAAGACCCGAAAGCCGAGCACACTATACTGAAGATAGCTCAGCCGTTATACGACAAGATGTTGCGCGAAGAGGTCACCAACAGACAAATGCTGCAAGAGCGGGGACTGCCCTTTTTTCAAGATTTACTGAGCGCTAACACATCACGTAAGAAGAACAAAGCAAACCCGTACAACCCGCGCGACCAAGACGAGTGCGAGTATTGCAGGGCCACGTTGTACCTCTCGAAGGTAAAGGGGCTCACCGGGAGAAATACAGTACTATGCCTAGAGCATGCACTCAAATTGCTTGACACTGAAAAATACAAGGACACGAACATAGAGCAAGTACAAGTTCTGGTGCACGTGAGTGTGAAAGAACTAAACACCGTGCACGACGACATGAAGCGTCGCCTAGGCATCCCGATCGCCTAA
- Protein Sequence
- MIISNRDYVLQLDGVEVNLPKLYHLVQRHGGLETVYNKNRWGKVAEDMKFNKGPNTERKLDQIYVKYLLPYDTLSHKERQDITKKVENAWNRKNQKLLDRAMNPLNRQKRLLGLMDSSDDETEDEDTVAAVNEAEDCIIKGAVMNRAKFKKIATMTYENTFGQASESAHPPELNKIEKYYWRLVTQGTEHVCVHTAAIDTGEEGYGFIKNKSDSYGRHPWNPKMVSQNPRNVLQYLGPVLGVTVPTLLLGMLFSTSCWHKDPHAVSWLEYQLLGPERIWYGIPANQASNFRNAVEYLCPTFCQNKFLWMSSDVTMIPPDMLREHNVTLSRVTQREGEYILAFPNAYTCCISTGYTESESVYFAPPSWLESLWTVFKEARESCEPTMFAMEHLLYNIGKDPKAEHTILKIAQPLYDKMLREEVTNRQMLQERGLPFFQDLLSANTSRKKNKANPYNPRDQDECEYCRATLYLSKVKGLTGRNTVLCLEHALKLLDTEKYKDTNIEQVQVLVHVSVKELNTVHDDMKRRLGIPIA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01338270;
- 90% Identity
- -
- 80% Identity
- -