Basic Information

Insect: Cosmia pyralina
Gene Symbol: -
Assembly: GCA_946251865.1
Location: CAMIUE010000451.1:9277-24368[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.019 2.3 10.2 0.1 1 23 138 161 138 161 0.95

2 10 3.3 3.8e+02 3.2 0.0 1 22 244 265 244 265 0.92

3 10 0.0039 0.46 12.4 0.1 1 19 296 314 296 316 0.95

4 10 0.1 12 8.0 0.1 3 21 342 360 340 361 0.93

5 10 0.013 1.6 10.7 2.1 1 23 373 395 373 395 0.98

6 10 2.5e-07 2.9e-05 25.6 0.8 1 23 402 424 402 424 0.98

7 10 0.00088 0.1 14.4 0.2 1 23 430 452 430 452 0.98

8 10 0.0028 0.32 12.9 0.1 1 23 458 480 458 480 0.97

9 10 8.8e-05 0.01 17.6 0.1 1 23 486 508 486 508 0.98

10 10 3e-06 0.00035 22.2 0.9 1 23 514 537 514 537 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.019	2.3	10.2	0.1	1	23	138	161	138	161	0.95
2	10	3.3	3.8e+02	3.2	0.0	1	22	244	265	244	265	0.92
3	10	0.0039	0.46	12.4	0.1	1	19	296	314	296	316	0.95
4	10	0.1	12	8.0	0.1	3	21	342	360	340	361	0.93
5	10	0.013	1.6	10.7	2.1	1	23	373	395	373	395	0.98
6	10	2.5e-07	2.9e-05	25.6	0.8	1	23	402	424	402	424	0.98
7	10	0.00088	0.1	14.4	0.2	1	23	430	452	430	452	0.98
8	10	0.0028	0.32	12.9	0.1	1	23	458	480	458	480	0.97
9	10	8.8e-05	0.01	17.6	0.1	1	23	486	508	486	508	0.98
10	10	3e-06	0.00035	22.2	0.9	1	23	514	537	514	537	0.97

Sequence Information

Coding Sequence: ATGATGTTTGATCCACCCGATTACCCATACAAAGAATTATCAGAATCTTATGATCCAAACGACTTACTTTTCACTAATGATCCTGAGACCAATGAAACTCTAactaatgttaataaaaatccACCAGACGTTACTTCTATAttgaatacaaataaaacaatagaaagtcaAATATCTTTTCATTCGAACGATTCTGGAAGATTTTTCAATGTAGAAAATTCATCTTTCTTCCAAGAAAATTCAAACACGGAACAGATCACGGATCTGTATATTATACAGTCGGAAAACTTATTTAACTATGAACCAACTCTACTTGATGAAAATACTGTTAATCAATTCCTATTGCCTCTTCAGGACTCTTCAGGAAAACCAAAGGCTAGTGAAAGCACCGGTCCGGACTTGCTGGCACTGCATTCTTGTGTAATCTGTCTTGAGATATTTACCACCGAAGCTGATCTTCTCGACCACACTATTTCGCTTCACACTTCCGATAATTCCATAGACCAGCCTCAAAGTACATTATTACCTGCCCCTGTTAATGACAAAGTTGAAACGAGGAATGGACCAGAACCAGTTCAGAGTAATGAAAACTTCGAGACTGAGTGGCTCGTGTGCCGAATGTGCGAGCGTGTGCTATCGACCGCTCTGGAAGTTGAACCCACGGAACAACTGTGTTGCATGGCCTCCGATGGCAAGGGCAGTGTTACTTCTCGCAAACTATACACTATGTACGTCTGCGACTTCTGTAGTGGACTGTTTGCCGATGGTGATGCCCTGGACAAACACCGGCTGACCTGCTTCATTGAGgaccaaaataattattatgaggaTCAAAACGAAAGCTGCATCTCAGATGCGAATATATCTCAAGGTCCTGAAGTCTGTTATGCATGTGACACCTGTGGAAAGCAGTATGCATCTACTGAGGAGTTAAAGGTGCATTCCTTGGAGTGCCAAAGACCTCCACCCGCTAGAAACACCCGGCGGTCGTACACAAACAGTGGTAACAGTAAAATGTGGAACTGTGGCTCTTGCAACCAACTTTTCGCTACAGCCAGGGACCTGTACCGCCACAAACGGGGCGAGGATAGACCCCCGGGCGCTCCGCTGATGGCCTACGTGTGCGAGGAATGCGACAAAGTGTTGGGTAGCATGTGCGCATTGCATACGCACAAGAAAATGCACAAAGTTACTAAGCCTGGTTACCCATGCCGAGTGTGTGGACGTCGCTTCAACCAGTCTGGTCACTTGGCCATCCACATGCGTATGCACACGGGGGAACGGCCTTACCCCTGTGACCTGTGCCCTAAGGCCTTCAAAGTCAAGGTGGAGCGCGACGATCATCGTAGGACCCACACGGGCGAAAAACCCTTCGCGTGCACCGCGTGCCCCAAGACGTTCACTGCCGCAGCACGCTTGCGTGAACACGCACGCATTCACACAGACCAAAGACCTTACCGTTGCGAAATTTGTGGCGCCGCCTTCAGAAGACCTTACGCTAGAACCGTGCACACCCTCATTCACACCGGAGAGAAACCCCATGAGTGTGACATCTGTGGAACTGCCTTCAGACGATCTGGAGATATGTGGAAGCACAAGCGAACCCTCCACGGAGTCCAAGCAGCGTCCATCGACACAgaaccaaagaaaaaaaaaagttga
Protein Sequence: MMFDPPDYPYKELSESYDPNDLLFTNDPETNETLTNVNKNPPDVTSILNTNKTIESQISFHSNDSGRFFNVENSSFFQENSNTEQITDLYIIQSENLFNYEPTLLDENTVNQFLLPLQDSSGKPKASESTGPDLLALHSCVICLEIFTTEADLLDHTISLHTSDNSIDQPQSTLLPAPVNDKVETRNGPEPVQSNENFETEWLVCRMCERVLSTALEVEPTEQLCCMASDGKGSVTSRKLYTMYVCDFCSGLFADGDALDKHRLTCFIEDQNNYYEDQNESCISDANISQGPEVCYACDTCGKQYASTEELKVHSLECQRPPPARNTRRSYTNSGNSKMWNCGSCNQLFATARDLYRHKRGEDRPPGAPLMAYVCEECDKVLGSMCALHTHKKMHKVTKPGYPCRVCGRRFNQSGHLAIHMRMHTGERPYPCDLCPKAFKVKVERDDHRRTHTGEKPFACTACPKTFTAAARLREHARIHTDQRPYRCEICGAAFRRPYARTVHTLIHTGEKPHECDICGTAFRRSGDMWKHKRTLHGVQAASIDTEPKKKKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00185551;
90% Identity: iTF_00120791;
80% Identity: -