Cpyr023815.1
Basic Information
- Insect
- Cosmia pyralina
- Gene Symbol
- Zfy1
- Assembly
- GCA_946251865.1
- Location
- CAMIUE010000865.1:231910-236310[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.13 16 7.6 0.9 2 23 148 169 147 169 0.96 2 14 0.26 31 6.7 1.4 6 23 181 199 181 199 0.95 3 14 7.3 8.6e+02 2.1 1.1 3 23 211 232 210 232 0.91 4 14 7.2e-08 8.4e-06 27.3 1.0 2 23 255 276 255 276 0.97 5 14 6.4e-05 0.0075 18.0 2.1 1 23 282 305 282 305 0.96 6 14 0.038 4.4 9.3 0.0 1 23 311 333 311 333 0.96 7 14 2e-05 0.0023 19.6 3.2 1 23 339 361 339 361 0.98 8 14 0.37 44 6.2 3.6 1 23 481 503 481 503 0.95 9 14 0.00036 0.042 15.7 2.0 2 23 510 532 509 532 0.92 10 14 3.8e-06 0.00044 21.9 1.5 1 23 538 560 538 560 0.98 11 14 3.1e-07 3.7e-05 25.3 2.5 1 23 566 588 566 588 0.98 12 14 0.00011 0.012 17.3 0.2 1 23 594 616 594 616 0.98 13 14 0.00017 0.02 16.7 1.6 1 23 622 644 622 644 0.93 14 14 0.00084 0.098 14.5 1.7 1 23 650 673 650 673 0.93
Sequence Information
- Coding Sequence
- ATGGATGTGGTCTACGGTACTGAAGCCTTTTCGAAAACCGGCTTGTTCTGGTGGCTGGAACTCGTCAAGTCTTCTGGCGAGACGaaaaCAAATCCACCTAATGTTACCATTAAATCAAGTCCAAGTGTCGGAGATGAAGCACAGAGCAAGTTGTTTTATACGAGTGTCAGAAATGCTCTGATTGACTTTCATATTGATCTGGAGGAAGATGATACGGATGTAGAGTTTGTTTGCCAAAAGTGTGCGGAGAAGCCAGCGCTGACCACTGTACACAGCCTCGCTGAACATATCCGACACGACCACTCTCCTGACATACTCAACAATACTGTTAAAACATTCATCACCAACTACATAACGTTCGAACAAGTGCCAGTAGAGGATTCTGACAGAGAAACACAATCATACACTAAAGAGAAGTCCCAGATAGTACTGCCGAGCCTGCACTGTCCGTTCTGCGCGAGTGTGTTCTCTTCGGCCACGCGGCTCGTCTACCATCTCAACAAACACGTGGAGGTGAACCTGGCGGCCGGCGCCATGTGCTGCGACCTTGTCTACAGCCACAAGAAACACTTTGTGCAGCACCTGCAAGAGGCACACGTCGACAGGACAGCCGACGAGAAAGTACCAGTGTGCGTCAGCTGTGGCTTCACCGCACACCATGCCGAAGAAATGAGACAGCATTATAAAGACGCGCACAACGATTTGAAAAGTGCAAAAGAGAAAAAAGTAGAGAGCCCAAACAACCAGAAGTACATCCCAGCGGTGTGCCCCGAGTGCAACAAGACGTTCTCCAACAAGTACAACATGTTCGCGCACATGCGCAGTCACACGCATACCGCGGTCTACCCGTGCGACAAGTGCACTCGTATCTACCGCAACCGGGGGAACCTTACCCATCACAAGAGACTTGCGCACCAGGGAATACTGAACTTCATATGCGTCGAGTGCGGAGAGGCGTTCCCCAGTCGGTTGGAGCGCGTCATCCACGCGCGCATACACTCAGGAGAGACGCCCTACAAGTGCCGGCACTGCGGCAAGTCGTACCGCGCCAAGAACACGCTCACGCGACACCTGGAGATACACACAGGCATACGCAAATATCTGAGCCCCTGCGACTTGCCCGAGGAACTCCGCAGTGCCCCCTCTGACCCGTCCGAGGTGTCCGATGATGAGCCGCTGGCCACGTTCGCTACCAAAAAGCCCGCGAAACTTTATACCAACTTCTACAGAGCACTCGTGAACTTTAGAGACCATTTTGTTAATGATCAACATTACGAGGATTATCCTGACTTCACCGACTCGAGTGTGTCTGACGCTGAAAAGAATGACGTGGACAGGTTCGACGACCTGACGCAGTGCAACATGAGGCGAGACAGACTGGATGAGGAGACAAGGCTAGAGCTGAGAGAAGTGCAGAACAAAATCGACAACAAGACATACTACACGTGTAAGATCTGCAGCAAGAACCTGAGCTCTGCGCACACGTACCTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCATGCGTATGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCAAACGGTCTGCAGCGGCACCTCACAGAAACGCACGAGCGCGTGCGCCGCTACAACTGCTCGCTATGTACCAAGAACTTTGCCAACTCGCAGAATCTCAAGCAACACTTACGGATACACACCGGAGAGAAGCCTTTCGTGTGTCCTCACTGCGGGAAGAGGTTCACTCAGAGTGGTTCGTTACACGTGCATCTGAAGATACACAGTGAACAGTTTCCTTATGAGTGCGCGGAGTGCGGGGCTAAGTTCAGACTGCGGTCGGGGCTGGTGCGGCACAGACTGAAGCACACGGGCGAGCGGCCGCACGTGTGTGCGACGTGCGGCAAGGGGTTCCGGCAGCGGCACGAGCTCACGACGCACGGCCTCGCGCACAGCGGCGCCGCGCCGCACGCCTGCGCCGCCTGTCCGCGCGCCTTCCGCCAGCGCCGCGCGCTGCGGCATCACGTGCGCCGCGTGCACGACGCGGAACCTCTCGACGTCGTCTACAACGTCACGCACTACTAG
- Protein Sequence
- MDVVYGTEAFSKTGLFWWLELVKSSGETKTNPPNVTIKSSPSVGDEAQSKLFYTSVRNALIDFHIDLEEDDTDVEFVCQKCAEKPALTTVHSLAEHIRHDHSPDILNNTVKTFITNYITFEQVPVEDSDRETQSYTKEKSQIVLPSLHCPFCASVFSSATRLVYHLNKHVEVNLAAGAMCCDLVYSHKKHFVQHLQEAHVDRTADEKVPVCVSCGFTAHHAEEMRQHYKDAHNDLKSAKEKKVESPNNQKYIPAVCPECNKTFSNKYNMFAHMRSHTHTAVYPCDKCTRIYRNRGNLTHHKRLAHQGILNFICVECGEAFPSRLERVIHARIHSGETPYKCRHCGKSYRAKNTLTRHLEIHTGIRKYLSPCDLPEELRSAPSDPSEVSDDEPLATFATKKPAKLYTNFYRALVNFRDHFVNDQHYEDYPDFTDSSVSDAEKNDVDRFDDLTQCNMRRDRLDEETRLELREVQNKIDNKTYYTCKICSKNLSSAHTYLFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERVRRYNCSLCTKNFANSQNLKQHLRIHTGEKPFVCPHCGKRFTQSGSLHVHLKIHSEQFPYECAECGAKFRLRSGLVRHRLKHTGERPHVCATCGKGFRQRHELTTHGLAHSGAAPHACAACPRAFRQRRALRHHVRRVHDAEPLDVVYNVTHY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01230874;
- 90% Identity
- iTF_00123588;
- 80% Identity
- -