Basic Information

Insect: Cosmia pyralina
Gene Symbol: -
Assembly: GCA_946251865.1
Location: CAMIUE010000500.1:13277-16806[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4e-06 0.00047 21.8 1.7 1 23 215 237 215 237 0.98

2 9 3.8e-08 4.5e-06 28.2 1.6 3 23 245 265 243 265 0.98

3 9 0.00013 0.015 17.0 0.3 1 23 271 293 271 293 0.98

4 9 1.4e-05 0.0016 20.1 1.7 1 23 299 321 299 321 0.99

5 9 2.9e-05 0.0034 19.1 1.7 2 23 502 523 501 523 0.96

6 9 3.7e-09 4.4e-07 31.3 1.6 1 23 529 551 529 551 0.98

7 9 0.0031 0.37 12.7 0.6 3 23 559 579 557 579 0.97

8 9 8.1e-05 0.0095 17.7 1.5 1 23 585 607 585 607 0.99

9 9 0.025 2.9 9.9 0.8 1 23 613 637 613 637 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4e-06	0.00047	21.8	1.7	1	23	215	237	215	237	0.98
2	9	3.8e-08	4.5e-06	28.2	1.6	3	23	245	265	243	265	0.98
3	9	0.00013	0.015	17.0	0.3	1	23	271	293	271	293	0.98
4	9	1.4e-05	0.0016	20.1	1.7	1	23	299	321	299	321	0.99
5	9	2.9e-05	0.0034	19.1	1.7	2	23	502	523	501	523	0.96
6	9	3.7e-09	4.4e-07	31.3	1.6	1	23	529	551	529	551	0.98
7	9	0.0031	0.37	12.7	0.6	3	23	559	579	557	579	0.97
8	9	8.1e-05	0.0095	17.7	1.5	1	23	585	607	585	607	0.99
9	9	0.025	2.9	9.9	0.8	1	23	613	637	613	637	0.95

Sequence Information

Coding Sequence: ATGGACGTAGACACGACAACACCGTACGTCCTCTACAAAGATGGCGTGGAGCGAGCCCCCCCGGGCACGCAGTGGGGCGGCGGAGTGCTGGACGGCGGCTACCAGCCCATGCAGCATCAGAGCCCTGGCGGACCCTCACCGCAGCCTGAGCCCCAGCTCGCGTCGCCTGCGCCCTCACCCTACCCCCCTGCGCCGCCTCCCCCAGACCCCACCGGGGCCGCAGAGGACGCCGCCCAGCAACTCGCTCAACAACAGGCACAGCAACAAGcgcaacaacaacagcaacagcagcaacaacaacaacaaacttcTCCCGAACACATGCAAGTGGAGCAACAGCTCCAGAGCCAATCTCAGCCCCAGCCTCCCTCGCAGGACCACCTCGACCGCACGCCGTGCTTCGTCCCGCAGCCGGACCTGCAGCAGCAGTACTCGCCGTACTTCAAGGAGGCGCGACCAGCGAGCCACATGCTCGGCACCGGCGGCTTCCCGTTACACTACCTGAAACAAAACGGTGGTGTGCTGTCCCTCGAAGGCCCTCTAGACCAGTACTCAGCGCCCGACCTACGCCACTTACCAGACATAGTGCAACCTGAGCCGCCGAAGCCGCGGAAGCACAACCCGAACTCAGAGCTACGCTTGTTTAAGTGCCTGACGTGCGGCAAAGACTTCAAGCAGAAGTCGACGCTGCTACAGCACGAGCGGATCCACACAGACTCGCGGCCTTACGGCTGTCCGGAGTGCGGCAAGCGGTTCCGGCAGCAGTCTCACCTGACGCAGCACCTGCGCATCCACGCGAACGAGAAGCCGTACGCGTGCGTGTACTGCCCGCGCTCGTTCCGGCAGCGCGCCATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATACCCCCCGGCCCccgcgcgcgccgcccgcacTGACCGTGCGGTCACTGCCGCCGGCGCCCGCGCTCCCCGCCGCCCCCCGCACCGTCGATTCGGTCTCGCATCCATTGGCCTTCCTATCAAAACAAATTCTCGGTTCCCTCATCGCCCGTAGAACGCAGGGCGCCCGCGAGACGCGGAACCGACCGCCGGACGCTTCCGTAACCGTTCCCAATGTTTCGCCGCATCTCATCTTCAAGAATGGAACAACGCCGACGCTGTGGCCCCAGGATGTACCATTCCCAGCTGATGAGAACAAAGAAGAGATCCAGTCGACGTTCGGCGACGCGGACGGACAGAACGGTGACCCGCGCGGCTCTTGCTTCTCACCTGGCGACACGGCGCAGTACCCTGCTTACTTCAAAGATACGAAAGGTCTCAATCACTCAGTCTTCAGCTCGGGGCTTTCTCTGCAATATTTGAAAGGCGGTAAGCTACCAGACGTACTCGGAGGGCGAGCGATGCCCCTGTACGTGCGCTGCCCGATTTGCCAAAAGGAGTTCAAACAGAAGTCAACGTTGCTACAACACGGGTGCATTCACATAGAGTCACGTCCATACCCCTGTCCCGAGTGCGGCAAGCGCTTCCGGCAGCAATCGCATCTGACGCAGCACCTGCGGATCCACACCAATGAGAAGCCATACGGCTGCGTTTACTGTCCGCGGTTTTTCCGTCAGCGGACCATCCTCAACCAGCACTTGCGCATCCACACCGGGGAGAAGCCGTACAAGTGCACCCAGTGCGGCAAGGACTTCAGACAGAAGGCAATCCTCGACCAGCACACGCGGACGCACCAGGGCGACCGGCCCTTCTGCTGCCCCATGCCCAACTGCCGGCGGCGGTTCGCCACGGAGCCGGAGGTGAAGAAGCACATCGACAACCACATGAACCCGCACGCCGCCAAGGCGCGGCGCGCGGACGCGTCCAAGACGCCGCGCCCGCtgccgcccgccgccgccgtggtGAAGCCCGAGCTGTACTTCCCGCAGTGCTACGCGCCGCCGTTCCAGCAGTTCCCCGGGCCCGAGTTCAAGCCGGTGGTGGGCGCGGGCGCGCCGGGCGCCTGCCTGCCGGCGCAGTga
Protein Sequence: MDVDTTTPYVLYKDGVERAPPGTQWGGGVLDGGYQPMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDPTGAAEDAAQQLAQQQAQQQAQQQQQQQQQQQQTSPEHMQVEQQLQSQSQPQPPSQDHLDRTPCFVPQPDLQQQYSPYFKEARPASHMLGTGGFPLHYLKQNGGVLSLEGPLDQYSAPDLRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYTPRPPRAPPALTVRSLPPAPALPAAPRTVDSVSHPLAFLSKQILGSLIARRTQGARETRNRPPDASVTVPNVSPHLIFKNGTTPTLWPQDVPFPADENKEEIQSTFGDADGQNGDPRGSCFSPGDTAQYPAYFKDTKGLNHSVFSSGLSLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADASKTPRPLPPAAAVVKPELYFPQCYAPPFQQFPGPEFKPVVGAGAPGACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00772240;
90% Identity: iTF_00888518;
80% Identity: -