Basic Information

Insect: Cosmia pyralina
Gene Symbol: -
Assembly: GCA_946251865.1
Location: CAMIUE010000076.1:106965-125095[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9.8e-05 0.012 17.4 2.2 1 23 425 447 425 447 0.97

2 20 0.0051 0.6 12.0 0.6 1 20 453 472 453 475 0.94

3 20 2.6e-05 0.003 19.3 5.6 1 23 494 516 494 516 0.98

4 20 0.00012 0.014 17.2 4.1 1 23 522 544 522 544 0.99

5 20 4.5e-05 0.0053 18.5 5.3 1 23 550 572 550 572 0.97

6 20 6.6e-07 7.7e-05 24.3 5.2 1 23 578 600 578 600 0.98

7 20 8.7e-07 0.0001 23.9 2.9 1 23 606 628 606 628 0.97

8 20 0.00012 0.015 17.1 6.7 1 23 634 656 634 656 0.97

9 20 0.00012 0.014 17.1 6.5 1 23 662 684 662 684 0.97

10 20 6e-07 7e-05 24.4 1.9 1 23 690 712 690 712 0.98

11 20 1.2e-05 0.0014 20.3 7.7 1 23 718 740 718 740 0.98

12 20 3.1e-05 0.0036 19.0 6.6 1 23 746 768 746 768 0.98

13 20 2.4e-06 0.00028 22.5 4.2 1 23 774 796 774 796 0.98

14 20 2.6e-05 0.003 19.3 5.0 1 23 802 824 802 824 0.96

15 20 2.6e-06 0.00031 22.4 5.0 1 23 830 852 830 852 0.98

16 20 3.7e-06 0.00044 21.9 6.0 1 23 858 880 858 880 0.98

17 20 7.2e-05 0.0085 17.8 7.9 1 23 886 908 886 908 0.97

18 20 3e-05 0.0035 19.1 7.7 1 23 914 936 914 936 0.98

19 20 0.00089 0.1 14.4 0.3 1 23 943 965 943 965 0.96

20 20 0.38 45 6.1 4.9 1 23 977 999 977 999 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9.8e-05	0.012	17.4	2.2	1	23	425	447	425	447	0.97
2	20	0.0051	0.6	12.0	0.6	1	20	453	472	453	475	0.94
3	20	2.6e-05	0.003	19.3	5.6	1	23	494	516	494	516	0.98
4	20	0.00012	0.014	17.2	4.1	1	23	522	544	522	544	0.99
5	20	4.5e-05	0.0053	18.5	5.3	1	23	550	572	550	572	0.97
6	20	6.6e-07	7.7e-05	24.3	5.2	1	23	578	600	578	600	0.98
7	20	8.7e-07	0.0001	23.9	2.9	1	23	606	628	606	628	0.97
8	20	0.00012	0.015	17.1	6.7	1	23	634	656	634	656	0.97
9	20	0.00012	0.014	17.1	6.5	1	23	662	684	662	684	0.97
10	20	6e-07	7e-05	24.4	1.9	1	23	690	712	690	712	0.98
11	20	1.2e-05	0.0014	20.3	7.7	1	23	718	740	718	740	0.98
12	20	3.1e-05	0.0036	19.0	6.6	1	23	746	768	746	768	0.98
13	20	2.4e-06	0.00028	22.5	4.2	1	23	774	796	774	796	0.98
14	20	2.6e-05	0.003	19.3	5.0	1	23	802	824	802	824	0.96
15	20	2.6e-06	0.00031	22.4	5.0	1	23	830	852	830	852	0.98
16	20	3.7e-06	0.00044	21.9	6.0	1	23	858	880	858	880	0.98
17	20	7.2e-05	0.0085	17.8	7.9	1	23	886	908	886	908	0.97
18	20	3e-05	0.0035	19.1	7.7	1	23	914	936	914	936	0.98
19	20	0.00089	0.1	14.4	0.3	1	23	943	965	943	965	0.96
20	20	0.38	45	6.1	4.9	1	23	977	999	977	999	0.99

Sequence Information

Coding Sequence: ATGAATCAGGATCACCATAATATGAATACGGGTGGTGGCCAGCCTCCGGGAAGTTCTGAGGGCCAAAGAGTTCAAGTTACCCAGCAGCAACAGCAGAATAACTTGCCTGCCACGACATCTGCTACTGATCTGCGAGTGAACTCGGCCGCAGTGAACGTTGCTTTGTCTAGTGTCGCGAAATATTGGGTGTTTACAAATTTATTCCCCGGACCGATACCGCAAGTGTCTGTGTATGGATTGCCTGCCGGTGCCAGAATTGAAAATGGAAAGCCTGTCCAAGATCTTGGTCAAGCTCATGCCAGTATACTGAATGGGGATCCAAATATCATACTTGGGCACCATGCGGGCCAGTCCCAAGTTACGGTATCTGCTCCTGGTGGTCAGCAGATACCAGTTTCACAGATCATCGCTACACAGTCTGGACAAACTCATGAAGCACTTGTTGCCCATAATCAGCAGCAAGCTGAGCTGGCGGCAGCCCAGGGCTCCGGCAACAACGCCCAGGTGTCAGTTAGTGCCGGCCAGGCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGCCACCATTCTCAACAACACATAATGCAGCAGCAACTTATGGCGCAGGCGCGGCCAGATCACAACAACCAACAGATCCAACTAACGGTAAGCGAGGACGGCATAGTGACGGTGGTGGAGCCGGCGGGCACAAAGATGGTCGACAAGGAGGAACTCCATGAGGCCATCAAGATGCCCAACGACCACACGCTCACCGTGCATCAGCTGCAGCAGATAGTCGGCCAACAGGTATTAGACAGCGTAGTACGCATAGAGCAAGCGACCGGTGAGCCGGCGAACATCTTGGTGACCCACAACCCTGATGGCACAACCTCCATCGAAGCCAGTGCTGCCGACCCTCTAATTGTCAAGGACGAGAAGAGTGCTAACAAAATTGAGACCGCACAGTTCGCTATACCTGCTGAGATAAAGGATATAAAGGGAATTGATTTGAAGAATGTAGGAGCCATGGGTATGGAAGGTGCAGTAGTGAAGATTTCAGCCGGTGCGTCAGAACACGACCTCCACGCGATGTATAAAGTCAATGTAGAAGATCTTTCGCAACTGCTTGCTTACCACGAAGTGTTCGGAAAACTTAATGCGGAAGGCCAGCAACAACAAGCTAAGGTAATAAGCGAGGTGGAAGTAGAAGTGGAAGCCGGCACCAGCGCAGCCATGGCTGAAACAGAATCCTCGCCCGGCCACCACTCATGTGATATCTGTGGAAAAATATTCCAGTTCCGATACCAACTTATTGTACATAGGCGTTATCACGGCGAAAGTAAACCATTCACGTGTCAAGTTTGCGGTTCCGCATTTGCAAATCCTGTTGAATTGTCGAGGCATGGAAAATGTCATCTTGCTGGAGACCCAAACGAAAGACACGCCAAGAGAATGGCACAAGATAAGCCATATGCTTGCACTACTTGCCACAAAACTTTCTCACGTAAAGAACATTTGGACAATCACGTTCGAAGTCATACCGGAGAAACTCCATACAGATGCGAATTCTGCGCGAAGACTTTCACCCGCAAAGAGCACATGGTCAACCACGTACGAAAACATACGGGCGAAACTCCGCACCGATGTGATATTTGCAAGAAGAGTTTCACCAGGAAAGAGCACTTCATGAACCATGTTATGTGGCACACAGGTGAAACGCCGCACCAATGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGATACTCCGTTCCGATGCGAATTGTGCGGCAAGTCGTTCACGAGAAAAGAACACTTCACCAATCACATACTGTGGCATACGGGCGAAACCCCGCACCGCTGTGACTTCTGTTCCAAAACGTTTACTCGTAAGGAGCATCTCCTGAACCACGTCCGTCAACACACGGGCGAGTCGCCTCACCGCTGCAACTTCTGCAGCAAATCATTCACACGCCGGGAACACCTTGTCAATCACGTGCGACAACACACTGGGGAAACGCCGTTCCAGTGCGGATACTGTCCTAAAGCGTTCACAAGGAAGGACCATCTCGTGAACCACGTCCGTCAGCATACAGGTGAATCCCCACACAAGTGCTCTTACTGCACAAAGTCCTTCACTCGTAAGGAACACCTGACGAATCATGTGCGACAACACACGGGCGAGTCTCCTCACCGATGTACTTACTGCGCCAAGTCCTTCACGAGGAAGGAACACCTCACAAACCACGTTAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTACTGTCCGCGGGCCTTCGCGCGCAAGGAGCATCTCAACAACCACATCCGACAGCACACCGGCGTCACGCCGCACGCCTGCTCCTACTGCAGCAAGAGTTTCACCAGGAAGGAACATCTCGTTAACCATGTTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTACTGTTCAAAGTCGTTCTCTCGTAAGGAGCACCTCACGAACCACGTGAACCTTCACACAGGAGAAACACCCCACAAATGTCCCTTCTGCACAAAAACATTTTCCAGAAAGGAACACTTAACCAACCACGTCAGGATTCATACGGGCGAGTCTCCGCATCGCTGCGACTTCTGCCAGAAGACGTTTACTCGTAAGGAGCATTTGACGAATCATCTGAAGCAGCATACCGGCGATACCGCACACGTCTGCAAGGTGTGCTCCAAGCACTTCACCAGGAAAGAACATCTTGTCACACACATGAGGTCGCACAGTTGTGGCGAGCGTCCATTCAGTTGCGGCGAGTGTGGAAAATCTTTCCCGTTGAAAGGTAACCTACTATTCCACGAACGATCACATGCCAAGAACAATGCTAATGCTGCCAATAAGCCGTACCGATGTGAAGTCTGTTCCAAGGAATTCCTCTGTAAAGGCCATTTAGTGTCTCATCGGCGCACACACGCGGAATGGGTCGAAGGTACCGCGACTGGCGAAGCACCTGCTGAAACAGAAGACTGTACTGATAATAAGTGTATCAAAGTTGAGCCAGAACGAAATGAAGTAAAACATGAAGTCAGGACGACAGTCGAAACGAGACCAGCTGAGACCAATGTCGCACAAACTCAGCCAAACACAGCAACTGTGATGATAACCAATAATCAACAAGTGCGCGCGGCGACGGTGAGCGCGGTGAACGCGGTGGGCGCGGGCAGCGCGGGCGTGGCGGCCACGTTCGCGCACACCGTGGCTGCGCAGCACCACGCCGGCGCCAACATCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNQDHHNMNTGGGQPPGSSEGQRVQVTQQQQQNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAPGGQQIPVSQIIATQSGQTHEALVAHNQQQAELAAAQGSGNNAQVSVSAGQATHQQVPNNRVEFVQHHNIDMGHHSQQHIMQQQLMAQARPDHNNQQIQLTVSEDGIVTVVEPAGTKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKSANKIETAQFAIPAEIKDIKGIDLKNVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNAEGQQQQAKVISEVEVEVEAGTSAAMAETESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHQCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGVTPHACSYCSKSFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHAKNNANAANKPYRCEVCSKEFLCKGHLVSHRRTHAEWVEGTATGEAPAETEDCTDNKCIKVEPERNEVKHEVRTTVETRPAETNVAQTQPNTATVMITNNQQVRAATVSAVNAVGAGSAGVAATFAHTVAAQHHAGANIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -