Cpyr002971.1
Basic Information
- Insect
- Cosmia pyralina
- Gene Symbol
- -
- Assembly
- GCA_946251865.1
- Location
- CAMIUE010000086.1:19577-21904[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.024 19 6.7 2.6 18 43 9 31 5 32 0.93 2 19 0.036 29 6.2 0.2 17 44 36 60 32 60 0.81 3 19 0.0023 1.9 10.0 0.1 18 43 68 90 65 91 0.87 4 19 0.00015 0.12 13.8 0.9 17 43 98 121 95 122 0.90 5 19 0.015 12 7.4 4.0 18 44 129 152 127 152 0.94 6 19 0.00014 0.11 13.9 1.4 14 43 156 182 153 183 0.89 7 19 0.0097 7.9 8.0 0.5 18 44 189 212 185 212 0.90 8 19 0.0065 5.3 8.5 0.5 17 43 219 242 214 243 0.85 9 19 0.4 3.2e+02 2.8 0.1 17 43 253 276 244 277 0.79 10 19 0.91 7.4e+02 1.7 0.5 14 43 298 324 281 325 0.73 11 19 0.41 3.3e+02 2.8 0.0 15 27 358 370 354 384 0.80 12 19 0.032 26 6.3 4.3 16 43 404 428 396 429 0.86 13 19 0.55 4.5e+02 2.3 4.4 14 29 431 446 427 458 0.73 14 19 0.057 46 5.5 6.5 13 43 459 486 451 494 0.74 15 19 0.73 5.9e+02 2.0 2.7 18 44 493 516 489 516 0.83 16 19 1.2 9.3e+02 1.3 0.8 18 28 523 533 519 546 0.82 17 19 0.00014 0.11 13.9 1.9 5 43 604 641 603 642 0.85 18 19 7.4 6e+03 -1.3 0.3 15 39 659 685 653 693 0.81 19 19 2.7 2.2e+03 0.1 0.2 13 28 687 702 677 704 0.83
Sequence Information
- Coding Sequence
- ATGTATCAAAATCAATTAGATTTCGTTTGCGACTACTGCTCGAGGacttttacaagaaaatataacTTACAAACTCATATTGAAAACTGTCATATTAACTCTTCATGCCACTGTGATATTTGTGGCCAGAATTTTGGCAGTCCGGCTGGATTGATACAACATTTATCCAGAGGCCATAACAATTATGGCCAGCCCTTCCCAGAATGTGAActatgcggacgaatttttacTAGAAAACAGAACATAACGTCACATATGATTACTGTGCATTTACAAGGTCTTGGCTATGAAATTCGGTGTCGGTTTTgcgaaaaaacttttactacagaaCGGAATTTGAAAAGGCATGTCAATCAATTGCATAATCCTGATGTTGAGTATCCTACGTGTAACGAATGTCAcaaggtttttaaaggaaaacacTCGCTGATAACACATATACACTCAGTACATAAAATAAGCGAGAGAGACGCTATCAAATGCCATTTGTGCGAAAAAGTGTACACGAATAACAGGAACCTGAAACGACATATAGAAATGTTTCATGGCGTAAAAGGGGAGTTTAGATGTGATATCTGCCCGAAGGTATACACTTCGAACCAGAGTTTGAGACGGCATGCAAGGACACGGCACAACACCGACAGTCAGGAACATATGACATGCAACTTCTGCATGAAAGTTATAATCGGGCGAGAAAATTTCGACAGCCATATACAGTTCCACCACCAAGACACCGAAATGGAAGGTAGAAACGAATATGTGTGCGAATCTTGCCACAAAACCTTCGAAGAAGAGTTTTATTTGAGACAACACGTAAAATCAGAACATTCGTTTAAAACTTTCTATAAGTATTGCAGGAAATCGTTACTCAAACAATACGGAATGGACACGCAAAATATATACAACTGTGAATATTGTGACAATTCTTTTTTAACTGTCTACGAGCTTAAAGATCATATGCGCATCAACCACGACACTGAGTATTCGCTATCAACTTGCAACGTCtgttttaataagtttttttgtaaagaaactATGTCTGCGCATAGAAATGTGTGTCTGCCACCGCCAAACGTGAACACATGCAGTCACTGCGACAAACTCTTCACTGATATTTCAAGCTTAGAATTTCATACGAGAATCTTTCACCCCCAAGCGCAAATCGCTGATTCTAACATTTCATCTACAAACATTGATGAAGACGCTGTTTCGTTCAAATGTGAGCATTGTGAGCGCATCTATTACAGCGACAGATCCCTCAGGCATCATATGAAGCTAAAACACACGACAGACGAAGAAGTAGAATGTGAATTGTGTGGAAAAATCTGCAGTAACAAGTATTATTTAGCTTCTCATATAAAAATCGTCCATAACAACGACTCTTGGTCGAGATGCGAATATTGTGATAAACAGTTTAAATCGAAAAGGAATATCAGAAGGCATATTGAATACACTCATTTGGGCATGCAGCGACACAAGTGTATTGAGTGTGAGACGTTGTTTAAGGAAAAACGGAGCTTGAGAAAACATGTTCGGACGAAGCATCCTAATTCGGCGGCTTTTCCTCAGTGCCACATATGTCACAAACGATTTGAGTCGGCCAAGTCTTGCAAGATACATCTTAAACTGTTGCATTCTTTCAACATGAACACCTACCCGTGTCACCTCTGTTCCGTATCGTTCAGTTCGAATGAGGcgctaaatatacatttagagacgAAACATTTAGCCGAAGATCAAATATACAAATGCGAGGAATGCAATTTAGTCTTTAAAGGGCAAGAAAAGTTTGACGCTCACAACGATGTCTGCCACGTCAATTTAGTCCCTACGATCAAGCAGAAAGTTCTTCCTAGATGCATTCTTTGCATGAAAGATTTTAGCACAAGGAAAactttgaagcggcatataaagAAATTTCACGAAGATTTTGATGTGGATGAATTAGCGACTTATGGGTCGAGGCGAAGAACGTTTACAGTTGAATGTGAAGAGTGCATAAAAAGTTTCAACGATGATTTTCATTTGAGCGTGTATAATCAGTTAAAGCATTTGAGTGATTGGGAAGTTTTTAAGTGTGGGACTTGTTTTGAGACATATAACTCCTTGGAGTTCGCGATACAGAGGTATAAGGTAACCAACGCCGATGCtactaaaagcaaaatgattCTGAGCGAACTTTGTACCGCTGAGATGAGTGAAGAAGAGCATGACTTCTCTAACTTCGGCGCTCTGCATGATATGTTGCCGGAGAGTACTACCGATGATTTACAAGTCAAATTAGAAGATTTGGAGACTGACATCAAGACGGAGCCAGCGTCGCCGTAA
- Protein Sequence
- MYQNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCDICGQNFGSPAGLIQHLSRGHNNYGQPFPECELCGRIFTRKQNITSHMITVHLQGLGYEIRCRFCEKTFTTERNLKRHVNQLHNPDVEYPTCNECHKVFKGKHSLITHIHSVHKISERDAIKCHLCEKVYTNNRNLKRHIEMFHGVKGEFRCDICPKVYTSNQSLRRHARTRHNTDSQEHMTCNFCMKVIIGRENFDSHIQFHHQDTEMEGRNEYVCESCHKTFEEEFYLRQHVKSEHSFKTFYKYCRKSLLKQYGMDTQNIYNCEYCDNSFLTVYELKDHMRINHDTEYSLSTCNVCFNKFFCKETMSAHRNVCLPPPNVNTCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNIDEDAVSFKCEHCERIYYSDRSLRHHMKLKHTTDEEVECELCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRHKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALNIHLETKHLAEDQIYKCEECNLVFKGQEKFDAHNDVCHVNLVPTIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEDFDVDELATYGSRRRTFTVECEECIKSFNDDFHLSVYNQLKHLSDWEVFKCGTCFETYNSLEFAIQRYKVTNADATKSKMILSELCTAEMSEEEHDFSNFGALHDMLPESTTDDLQVKLEDLETDIKTEPASP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447464;
- 90% Identity
- iTF_00072251;
- 80% Identity
- iTF_00374458;