Cpyr025122.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cosmia pyralina
Gene Symbol
-
Assembly
GCA_946251865.1
Location
CAMIUE010000931.1:191194-193503[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-13 3.2e-11 44.1 0.0 1 38 14 50 14 53 0.94

Sequence Information

Coding Sequence
ATGCCTCGTCCAGAAAAGCCACGCACCATCGGGAATCATTCGGAAGAAAGTATGAAGCAAGCTCTTCATAGCATTCAGGGCGGAATGAGTGTTAGGAAAGCTTCTAAGATCTTCAATATACCTTTTACAACTTTAAGgcgttattttaataaatttaaaagttttGGGTCTGTGGAAACAATGCGCTTAATCCCTAATTATGAAGTAAGAAAAGTTTTTGATAATAAACAAGAAGAAAGCCTTaaagaatattataaatattgttcCTCAATATTTTACGGGTTGTCGGAAAAAGAGTGCAGGAGAGTAGCCTACCAAATGgcggaaaaaaataatataaagatgCCTGATAACTGGGTGAACAATAAAATAGCTGGAAAGGAATGGTTCAGGAAATTCAGGCAAAGGCACAAAGACCTCAGTTTGCGGAAGCCCGAGCCATGCAGTCTTGCAAGAGCCACGGCCTTCAACCGAACTAATGTggagattttttataaaaatctagAAAGTTTATTGCAGAGGTTTCCCGCTTTTAACGATGGAACTCGTATCTTTAACCTGGATGAAACATCGACCACTACAGTTCAAAAACCGCAGCGTGTCATTGCACCAAAAGGCCGCCGAAACGTTGGTAAAGTAACTAGCGGAGAACGTGGCACATTAGTCACTACGTGTTGCATAATAAGTGCAGGAGGAATAGCACTTCCTCCCGTTATGGTATTTCcacgaaaaaattttaaatcttACATGACGAAGAACACTCCTCCAGGAACATTGGGGCTGGCTGCGCCTAGTGGATGGATGAACACCGATATATTTCCAGACGTCATAAAACATTTCATCAAGAATACCAATTCTACAGTAGAAAACCCTACTTTACTTATATTAGACAATCATGAGTCTCATTTATCATTGAATGCTTTGGACTTAGCGAAGACTTCGGGTGTTCATATTTTGACCTTACACCCACACACTTCCGCAAAGTTACAACCACTTGATGTCGGTATATATGGACCATTTAAATCTTACTACAATGCAGCCATTGACTCGTGGATGCTGCGAAACCCGGGCAAACCTATTACTATATATGAAATAGGTGAAATTGTGGGTGTTGCTTTCCTTAAAGTAATGACGCCTGTAAACATAATCAACTCATTCAAGAAGTGTGGAATTTATCCGTTTGACCGCAATTTATTTACTGACGATGATTTTATGCCAAGTTCCGTAACTGATCGCCCGTATCCTGACGATGAAGAACAAAGGCCAAGTCAGATCGTGATGTCAAGTGTCGTTGCTGGAACAGACCAAACTCACATTAGAGATGAAGCTAATGCCGTGCAGCGAATTCAAAGAGTGCAATCGGATGACACTGTGTGTTCAAAAAGTGACGAAGATCTTGTGCCTGTCGATGCAACAACTATCCACATTCCAGCGAACGAAGACGGTGACACTTCCGGTCAGTCAACTACATTGCAGATAAATGCAGAAAGGGAAGGTTCACCTTCAATACTTGACTCTGTGAGCCAAGATGACTTTGCAAGAACAGTTTTACAAATTGAACCAGAAGTAACACCCGGGACATCTTATATGTCCGCATTACTGGAACTTCCAAGTTCTCCAGCCATTACGCCTAAAACTCCTGAAAAAAATCAAGTTCCGCTTAGTTTGATCAGCACAAATAATGTTAGTTTCATATCGCCGTTCGTATTCCGAGATCCAATTAAAGCCGGGCCAAGAAAATCAATTCGAAAACCTAGAAAATTAGGTCGAAGTATGATAGCTACCGATACTCCCGAAAAAACCATGATCGAGTTAGCTAAAGCCAAGACCACTAGACAGAGGGATGTCAAACGAaagaaaattgttaaaaaagtgCTGCAAGATGATTCCGATGAAGAAAATGATGAGGCTGTAGTTCAATATCAGGAATCAGACGAAGATAGCGAGTGGCTTGAAGAAGACGTAGACATGGAAATTGCTGCCATGACTGAACGTGATTTAAAAAGGCCTTTACTTCGACCTCCGATGGAAGGCGAATATGTTCTGGtagaattttcaacaaaaaaacagAAACTGTTTTACATTGGAAAAGTGTTGGAAAGCAGAAATGAACATATGGAATATTACATCAGTTTTTTAAGGAAGAAAACTCCAGGCAAATTTTATATGCCTACGGTGCCGGATCTGTCACTTGTTAAAGAAGCTGACATCAAATCTATATTGCCGAAACCCTCTGTTGGTGGCAGCACGACACGTCAACAGTCTTATTACTATTTTTCAATTGATTTATCTCAATTGAATGTGCAGTAG
Protein Sequence
MPRPEKPRTIGNHSEESMKQALHSIQGGMSVRKASKIFNIPFTTLRRYFNKFKSFGSVETMRLIPNYEVRKVFDNKQEESLKEYYKYCSSIFYGLSEKECRRVAYQMAEKNNIKMPDNWVNNKIAGKEWFRKFRQRHKDLSLRKPEPCSLARATAFNRTNVEIFYKNLESLLQRFPAFNDGTRIFNLDETSTTTVQKPQRVIAPKGRRNVGKVTSGERGTLVTTCCIISAGGIALPPVMVFPRKNFKSYMTKNTPPGTLGLAAPSGWMNTDIFPDVIKHFIKNTNSTVENPTLLILDNHESHLSLNALDLAKTSGVHILTLHPHTSAKLQPLDVGIYGPFKSYYNAAIDSWMLRNPGKPITIYEIGEIVGVAFLKVMTPVNIINSFKKCGIYPFDRNLFTDDDFMPSSVTDRPYPDDEEQRPSQIVMSSVVAGTDQTHIRDEANAVQRIQRVQSDDTVCSKSDEDLVPVDATTIHIPANEDGDTSGQSTTLQINAEREGSPSILDSVSQDDFARTVLQIEPEVTPGTSYMSALLELPSSPAITPKTPEKNQVPLSLISTNNVSFISPFVFRDPIKAGPRKSIRKPRKLGRSMIATDTPEKTMIELAKAKTTRQRDVKRKKIVKKVLQDDSDEENDEAVVQYQESDEDSEWLEEDVDMEIAAMTERDLKRPLLRPPMEGEYVLVEFSTKKQKLFYIGKVLESRNEHMEYYISFLRKKTPGKFYMPTVPDLSLVKEADIKSILPKPSVGGSTTRQQSYYYFSIDLSQLNVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01085069;
90% Identity
iTF_00373840; iTF_01085067; iTF_01085069; iTF_00924520; iTF_01424972; iTF_00758061; iTF_01424973; iTF_00758062; iTF_01085070; iTF_01424974; iTF_01085071; iTF_01424975; iTF_01085072; iTF_01424976; iTF_00667285; iTF_00850549; iTF_00745554; iTF_00745553;
80% Identity
iTF_00373840;