Ccil030507.1
Basic Information
- Insect
- Corythucha ciliata
- Gene Symbol
- nfxl1
- Assembly
- GCA_038030265.1
- Location
- CM075942.1:41240813-41252615[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.75 3.2e+04 -3.7 1.9 14 19 154 159 154 159 0.83 2 18 0.031 1.4e+03 0.7 0.5 4 10 190 196 189 196 0.96 3 18 8.9e-09 0.00039 21.6 16.9 1 19 204 221 204 221 0.99 4 18 0.51 2.2e+04 -3.2 0.9 6 10 247 251 246 251 0.81 5 18 7.8e-11 3.4e-06 28.2 11.7 1 18 257 274 257 275 0.98 6 18 0.28 1.2e+04 -2.4 0.9 5 10 299 304 299 304 0.94 7 18 8.7e-07 0.038 15.3 12.3 1 19 310 329 310 329 0.98 8 18 4.8e-10 2.1e-05 25.7 14.5 1 18 366 383 366 384 0.98 9 18 5.1e-05 2.2 9.6 14.7 3 18 420 435 418 436 0.91 10 18 4.4e-10 1.9e-05 25.8 13.8 1 19 445 463 445 463 0.98 11 18 0.3 1.3e+04 -2.4 0.8 5 10 491 496 491 496 0.93 12 18 8.3e-05 3.6 8.9 12.0 8 19 510 521 509 521 0.90 13 18 0.00036 16 6.9 6.7 1 12 530 540 530 540 0.96 14 18 1 4.3e+04 -4.8 3.4 14 18 566 570 566 571 0.84 15 18 0.44 1.9e+04 -3.0 3.7 9 18 588 601 587 602 0.78 16 18 0.00062 27 6.1 5.5 1 12 607 618 607 618 0.95 17 18 0.0019 84 4.6 16.1 1 18 645 661 645 662 0.93 18 18 1.7e-06 0.076 14.3 9.3 1 15 707 720 707 727 0.94
Sequence Information
- Coding Sequence
- ATGTCCTCCCGAAATCGAAATAAGTCGGTCAAGGTGGAAAACTCTGAAACACGCAATGGTAGAACGACTACGGAAGAAAAGTTCAACGCTGCCAGGGCTCGAATGCAACAGTCAGTCCAGAAACACTTGGATCAAGAACTGGAACAGTCGTCTGAGGAGGAGGACCTCGAGTCGGATGCGATATTCGATTCCGTGATTAAAAAGTACTCGACTCTCggtggcaaaaatgaagacTTGGGACGAACCCAAAATTTTCTCGAAAATGCATTCCAGTCAGGCGCTGCCGTCTGTCTCATTTGCATCGCTACTGTTAAACGCTCAGAATCGATTTGGAGCTGTGACTCTTGCTACGGATTTTTCCACTTGTTCTGCGTTCAACGATGGGCTAAAGACAGTATTGCCCACCAGAAATTAGCTGATGAAGATCGGCAGCGTACGCGTACGGATAGCTACTTCTGGCAATGCCCCAAATGCAGAAAGGACTACAATTCTGCAAGCGTCCCTTATCGCTATGAATGTTTTTGTGGTCAGAAGCAGGACCCGGAATTTCAACCGTGGCTCGTGCCTCACTCATGCGGTCAAGTGTGCAGCAAACCTCTGGAGCCGAAATGCGGGCACACGTGTCTTCTTTTATGTCACccagGTCCGTGTCCACCGTGTCCAAAAATGATCAAATCGAACTGTTTTTGTCTggcaaaaagagagaaaacggtACGCTGCAGTCAGAAGTACTGGTCGTGCGCACAACCTTGTCGAAAAAAACTCCTGTGTGGTAAACACGCGTGCGAACTTGTTTGTCATGACGGCGACTGCCCTCCGTGCGATAAAACATCGTCAGTAAAGTGTGACTGTGGACGAGAATCTAAGTCGATCCCTTGTGCTCAGTTAACTTGGAAATGCGACAAAGTTTGCGGCAAGCCGTTCAATTGCGGCCTTCACTCGTGCGAAATTGTCTGCCACCCAACTGGCGAATGCGGTGTCTGTCCTAGATCCCTGCCCAGGTCTTGCCCGTGTGGTAAGGAGACCGTGGACGTTGTGACGTCGTGCTCTGAGGAAGTGAACACTTGTGGTGGTACTTGCGACAAGCTGTTAGATTGTGGAATGCATACGTGTTCCCAGCGGTGTCATCGAGGGCCGTGTGGGCCTTGTAtggaatttttgaacaaataCTGCCGTTGTGGGTTGCACGTAAAAGAATTACCTTGCACCAAAGAGTTTCTCTGTGAAACTAAATGCAAAGGAATGCGGGACTGTATGGTTCACCCGTGCAGCAGAAAGTGCTGTGACGGACGGTGTCCCCCCTGTGAAAAACCGTGCCGAAAGACTCTAAGTTGTGGAACTCACAAATGTACATCCGTGTGTCATCGTGGACCTTGCTACCCCTGCCAGGTCACTAAAACTATATCCTGTCGTTGTGGCTCGACCGTTGTGACCGTCCCATGTGGAAcgccgaaaagaaaaaaaaacttacgcTGCAATAAATTATGCGACATACCGCCAGATTGCCATCACGATAAACGGGAAGAGCATAAATGTCACCAAGGTCCCTGTCCCCCTTGTCCACTTATCTGCGGTAAAAAAAGATTCTGCGGCCACCGTTGTACACTGCCCTGTCACTCGGCCGTTCTCGTTTCCGTCCAGAAAACAGCTCAGCCGTGGGGAAAACCGAGCCCTACCACAGAAATCAAAGAAATGCCTTGTCCAGACTGCACAGTACCGGTCCCTGTGTGGTGCCCCGGTGGTCACGAAAAGCTTCACTTCCCCTGTCATCGTGCCGTTTCACAACCTTGCGGCCGACCCTGTGGTCGACTTCTGCCCTGCACTAATCACAGTTGTTCTCTTCCGTGTCACAAAGTGTCGAATCCCAAGGGTGAAAATCTTGCAGGGGATGAATGTGATGAATGTACAGAAGACTGCGATGCCGAGCGTCCCTGTTCGCATCCTTGTCCTAGTATCTGTCATCCCCCACCATGCGCTCCCTGTAATATCACTTTGAAACTTCGTTGTCACTGTGGATTAAATTTCACCTATTCGAAGTGTTCAACCTGGCTCGACTCCGACGATGATTCTCGGAACGCGGCTCGTTCTTGTGGCAATCAGTGTCCTAAAAACTATCCCTGCGGGCATCGGTGTACGGCAAGTTGTCATTCAGGTGAATGCACTGACGCGATTTTGtgcaaaaagaaaataaaagtcaCCTGCCCTTGCAAACGAATAAAAAAGCTCGTCAACTGCCATTTGACGAATGACAATATAATTTTTTGCAACGAAGAGTGTAAATCTGAAAAACTCGAAAGAAAGCAAAAAGAGGACAAGGAAAAAGAGGAGGCTCGTCGGGCTGAAGAGAGACGGCAGCGTGAGGAAtttgaaaaattcgagaaaaaacttCAGGGTGGTGGTAAAAAACAAAGACCTCCGCCCAGGGAACGAGTCTCGAGCGATGGAGAATCTAAAAGTTTCTGGTCAAGGAATAAATATTTTTTGGCGTCCTTAGGTTTCGCCAGCGTTGCATCATTGCTTGGAGCCTATttagcttataaataa
- Protein Sequence
- MSSRNRNKSVKVENSETRNGRTTTEEKFNAARARMQQSVQKHLDQELEQSSEEEDLESDAIFDSVIKKYSTLGGKNEDLGRTQNFLENAFQSGAAVCLICIATVKRSESIWSCDSCYGFFHLFCVQRWAKDSIAHQKLADEDRQRTRTDSYFWQCPKCRKDYNSASVPYRYECFCGQKQDPEFQPWLVPHSCGQVCSKPLEPKCGHTCLLLCHPGPCPPCPKMIKSNCFCLAKREKTVRCSQKYWSCAQPCRKKLLCGKHACELVCHDGDCPPCDKTSSVKCDCGRESKSIPCAQLTWKCDKVCGKPFNCGLHSCEIVCHPTGECGVCPRSLPRSCPCGKETVDVVTSCSEEVNTCGGTCDKLLDCGMHTCSQRCHRGPCGPCMEFLNKYCRCGLHVKELPCTKEFLCETKCKGMRDCMVHPCSRKCCDGRCPPCEKPCRKTLSCGTHKCTSVCHRGPCYPCQVTKTISCRCGSTVVTVPCGTPKRKKNLRCNKLCDIPPDCHHDKREEHKCHQGPCPPCPLICGKKRFCGHRCTLPCHSAVLVSVQKTAQPWGKPSPTTEIKEMPCPDCTVPVPVWCPGGHEKLHFPCHRAVSQPCGRPCGRLLPCTNHSCSLPCHKVSNPKGENLAGDECDECTEDCDAERPCSHPCPSICHPPPCAPCNITLKLRCHCGLNFTYSKCSTWLDSDDDSRNAARSCGNQCPKNYPCGHRCTASCHSGECTDAILCKKKIKVTCPCKRIKKLVNCHLTNDNIIFCNEECKSEKLERKQKEDKEKEEARRAEERRQREEFEKFEKKLQGGGKKQRPPPRERVSSDGESKSFWSRNKYFLASLGFASVASLLGAYLAYK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -