Ccil031745.1
Basic Information
- Insect
- Corythucha ciliata
- Gene Symbol
- pnr
- Assembly
- GCA_038030265.1
- Location
- CM075942.1:58931986-58952475[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6 2.6e+04 -3.9 0.4 21 26 56 61 51 62 0.71 2 2 6e-18 4.3e-14 53.0 6.8 1 35 374 407 374 408 0.97
Sequence Information
- Coding Sequence
- ATGTGTGACGTTCCGCCGAAGTTCTACGAACTCTGTCGCCTTTGTTTATCGCGAGACGGAGCTAAATTGTCCATTTTCAAAGACGAAGGCGCCAGACGGAATCTTCCCCAGAAAATCGGTGTCTGCCTTCCCATTACGGTGGAGGAAGACGACAATTTGCCGAACGTCCTCTGTGAATTGTGCTACAACAAACTAGAAGCTCTCAATAATTTCAGAGAGGTCGCcttaaaatcagaaaaagcgttgaaagTTTTCTTGCAGTCTCCAGACGATGTCCCACCAGAAGATGCCGACGACCAACTGAAAAGCATATACGTCAACATCAAAGGATGGCGAAGCATCAAAGACTCTCCGGACCTGAGCCAGGACCGGCTCGAAGAGAGCCTCGAAGTTGGCAAAGAGGAGTGCGTCGTGTCGACCGTTCACGAGGACTACGAGGAGGGCGATCCATTGGAGTCGATGAACGGCGGCGACGGCGAAGACTCCGACTGTGATAGGTTAGTTATCAAACAAGAACCGCCGTCCTCCGCCGATCACCTCCACTCAGATGACCAGTTGATCGCCACTGGCGGGCAGATCAACACCGCCGGTGGCATCGGTCCACTCACCGAATCACCGACTAGGCGTCACCAAGAATTTATCAGACAGGTCATCGGCATCAATAACAACAGAATGACGGAAGCCAACAGCTTACTTCGCTCACTAATGTCCACCCCTCAAAACTACCAAGGACGTCCTGTTATACTCATGAGAGAAGAAGTGAGGTGGCCGCAACCGGGTTCACCGTCTCACAATGACGTACTTATGAACAGAACCAACATACCCAACAATAGAGTTagccACGAAGTCGTCGTTAGCACTGAAACCCGCTCACCGACGGTGACGCGGAGAAAACAAAGTTACCCGTCCCGTGCCGGCGACTCATATCAGACTCCGTCAAATAAAGGGCGGTCGACGGAGGCCATATCTCAATTGTTGGAGGCGGCCAATTACACCGGTGACGGTGATTTAGAAGTAAATGAACACGACTCGGGCGAGGATTCATTCAACAATACCTGGTCATCAGTCGACAATATATTGCGTACCAACAATAGGGTACCGAAGAGAATGCAAGTGGCCTGTACGAACTGCGGCACTCGCACCACAACAATCTGGAGGAGAAACCCGAACGGTGAAATGGTTTGCAATGCCTGCGGTCTCTACTATAAATTACACAATGTCAACAGACCAGCGACGATGCGCAGGGATACGATACACACGCGTCGTCGTCGTCCCAAATCAGAAAAACCCAGGATCAAAGTAGTGGAGCCCCCACCATTGGAGTCGCCGACAGAGTGCGCCAGCAGTGGCGGTAATTCAGGCAGCGAAGAGTGCGACGACATGCTCATCGCCCTTCGACGACAAATACAACCGCAATTTATGATGGCCGCCCTTCAACAGCACGTTACAACGAGTACCGTGACGACCGACGAGAAGCCTTTGAATCTCGTCGCGGGCTCTCACTAA
- Protein Sequence
- MCDVPPKFYELCRLCLSRDGAKLSIFKDEGARRNLPQKIGVCLPITVEEDDNLPNVLCELCYNKLEALNNFREVALKSEKALKVFLQSPDDVPPEDADDQLKSIYVNIKGWRSIKDSPDLSQDRLEESLEVGKEECVVSTVHEDYEEGDPLESMNGGDGEDSDCDRLVIKQEPPSSADHLHSDDQLIATGGQINTAGGIGPLTESPTRRHQEFIRQVIGINNNRMTEANSLLRSLMSTPQNYQGRPVILMREEVRWPQPGSPSHNDVLMNRTNIPNNRVSHEVVVSTETRSPTVTRRKQSYPSRAGDSYQTPSNKGRSTEAISQLLEAANYTGDGDLEVNEHDSGEDSFNNTWSSVDNILRTNNRVPKRMQVACTNCGTRTTTIWRRNPNGEMVCNACGLYYKLHNVNRPATMRRDTIHTRRRRPKSEKPRIKVVEPPPLESPTECASSGGNSGSEECDDMLIALRRQIQPQFMMAALQQHVTTSTVTTDEKPLNLVAGSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -