Ccil009365.1
Basic Information
- Insect
- Corythucha ciliata
- Gene Symbol
- pnr
- Assembly
- GCA_038030265.1
- Location
- CM075938.1:37927794-37939250[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3 9.3e+03 -2.4 0.1 9 14 71 76 70 80 0.74 2 3 3.7e-18 2.7e-14 53.7 2.6 1 34 97 129 97 131 0.96 3 3 6.3e-19 4.6e-15 56.2 5.3 1 35 156 189 156 190 0.98
Sequence Information
- Coding Sequence
- atgtttcacggTTCAACTAATGCGATGGCGTCTACAAGTTACATGGACACCCCTAACCATAacTTGTACGGCAGCAGCGGTGGGCCCGTATACGTACCGACTCGAGCCACGACCGCCTGGCAAGACCCTTATCATCAAAATCACCAtcaccaccatcatcatcaccaaCAACATCAACTGGCGCCAACGACGGCCAACTCCTTTTACCCCACGATGATGTGGAGGTCCTACGAGCACCACTATCGATCGTATGaaaacggtGGCATGGAAGTTGGTGAGGGTCGAGAGTGCGTCAATTGCGGCGCCATTTCAACTCCCCTGTGGAGGCGAGACGGCACGGGGCATTATCTGTGCAACGCCTGCGGGTTGTATCACAAAATAAATGGAATGAATCGGCCGTTGGCCAAACCAGCCAAAAGACTAGTCACACCTCATACGacGACAACACGGCGGCTCGGACTTTGTTGCACTAACTGTGGAACCGGAACGACGACACTCTGGAGGCGAAACAATGACGGCGAGCCTGTTTGTAACGCTTGTGGCCTCTATTTCAAACTGCACGGCGTTAATCGGCCGCTGGCGATGCGGAAGGATGGCATTCAAACGAGAAAACGAAAACCCAAGAAATCCTCCCAAGACGCTCCATCCGCAGGAACGCCGAGCAGTGGGTCAAACCCTTCTCACGTTCCAACAAGCGAAAAATTAACGAATTCAGCCGCGCCGGCGGAGATCCCATATTTGGGTCACACGTCACTACTCCTAGGCAACAGTGGCATCAAATCTGAGCCATCATCACACAACCAGTACAACGACTATATGGCCGAGTCCTACTATCAAACGCATCAGGTTCAGTACGGACATGGTCTTCATCAACACACGGACCATCTTGGTAATAAGTTGTTGGCGTCGACGTAA
- Protein Sequence
- MFHGSTNAMASTSYMDTPNHNLYGSSGGPVYVPTRATTAWQDPYHQNHHHHHHHHQQHQLAPTTANSFYPTMMWRSYEHHYRSYENGGMEVGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKINGMNRPLAKPAKRLVTPHTTTTRRLGLCCTNCGTGTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSSQDAPSAGTPSSGSNPSHVPTSEKLTNSAAPAEIPYLGHTSLLLGNSGIKSEPSSHNQYNDYMAESYYQTHQVQYGHGLHQHTDHLGNKLLAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -