Basic Information

Insect: Corythucha ciliata
Gene Symbol: -
Assembly: GCA_038030265.1
Location: CM075938.1:18388407-18404833[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 6.5 1.3e+03 1.4 2.2 1 23 93 116 93 116 0.94

2 22 0.094 18 7.2 4.9 1 23 123 146 123 146 0.97

3 22 0.0072 1.4 10.8 0.1 1 23 217 240 217 240 0.97

4 22 2 3.8e+02 3.1 4.5 1 23 246 268 246 268 0.97

5 22 0.048 9.3 8.1 0.9 2 23 274 295 273 295 0.96

6 22 0.21 40 6.2 1.4 1 23 301 323 301 324 0.95

7 22 0.2 38 6.2 3.9 2 20 607 625 606 626 0.95

8 22 6.8 1.3e+03 1.4 1.4 1 23 761 783 761 783 0.79

9 22 1.6 3.1e+02 3.3 0.5 1 21 789 809 789 810 0.91

10 22 0.00016 0.032 15.9 0.9 1 23 1007 1029 1007 1029 0.98

11 22 0.12 24 6.9 2.1 1 23 1039 1061 1039 1061 0.98

12 22 0.42 81 5.2 0.2 1 23 1070 1092 1070 1092 0.96

13 22 0.02 3.8 9.4 3.0 1 23 1103 1125 1103 1125 0.97

14 22 7.5 1.4e+03 1.3 1.3 1 23 1168 1190 1168 1190 0.84

15 22 0.0074 1.4 10.7 0.4 2 23 1210 1231 1209 1231 0.96

16 22 0.0026 0.51 12.1 2.2 1 23 1320 1342 1320 1342 0.99

17 22 0.099 19 7.2 0.1 1 23 1429 1451 1429 1451 0.95

18 22 0.00057 0.11 14.2 1.5 1 23 1457 1479 1457 1479 0.95

19 22 0.0053 1 11.2 2.6 1 23 1568 1590 1568 1590 0.97

20 22 0.00079 0.15 13.8 2.4 1 23 1596 1618 1596 1618 0.98

21 22 4.3 8.4e+02 2.0 2.3 2 21 1716 1735 1716 1737 0.91

22 22 0.0032 0.62 11.9 2.6 1 23 1744 1766 1744 1766 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	6.5	1.3e+03	1.4	2.2	1	23	93	116	93	116	0.94
2	22	0.094	18	7.2	4.9	1	23	123	146	123	146	0.97
3	22	0.0072	1.4	10.8	0.1	1	23	217	240	217	240	0.97
4	22	2	3.8e+02	3.1	4.5	1	23	246	268	246	268	0.97
5	22	0.048	9.3	8.1	0.9	2	23	274	295	273	295	0.96
6	22	0.21	40	6.2	1.4	1	23	301	323	301	324	0.95
7	22	0.2	38	6.2	3.9	2	20	607	625	606	626	0.95
8	22	6.8	1.3e+03	1.4	1.4	1	23	761	783	761	783	0.79
9	22	1.6	3.1e+02	3.3	0.5	1	21	789	809	789	810	0.91
10	22	0.00016	0.032	15.9	0.9	1	23	1007	1029	1007	1029	0.98
11	22	0.12	24	6.9	2.1	1	23	1039	1061	1039	1061	0.98
12	22	0.42	81	5.2	0.2	1	23	1070	1092	1070	1092	0.96
13	22	0.02	3.8	9.4	3.0	1	23	1103	1125	1103	1125	0.97
14	22	7.5	1.4e+03	1.3	1.3	1	23	1168	1190	1168	1190	0.84
15	22	0.0074	1.4	10.7	0.4	2	23	1210	1231	1209	1231	0.96
16	22	0.0026	0.51	12.1	2.2	1	23	1320	1342	1320	1342	0.99
17	22	0.099	19	7.2	0.1	1	23	1429	1451	1429	1451	0.95
18	22	0.00057	0.11	14.2	1.5	1	23	1457	1479	1457	1479	0.95
19	22	0.0053	1	11.2	2.6	1	23	1568	1590	1568	1590	0.97
20	22	0.00079	0.15	13.8	2.4	1	23	1596	1618	1596	1618	0.98
21	22	4.3	8.4e+02	2.0	2.3	2	21	1716	1735	1716	1737	0.91
22	22	0.0032	0.62	11.9	2.6	1	23	1744	1766	1744	1766	0.99

Sequence Information

Coding Sequence: ATGTCTTCAGCTCGCCCAGCGGCTATTCGTAACGGGGACAGCCTACTAGTCAAAAACATATCAAGCGGAGGCGCTCAGTTCTACAAAGAGACGATCTCGAAAGGACTCGCGGATGACAGCCAAGAAGAAATCAAAGGCGACCGAGGAGGTCGAACTGACGAGGAAGATTTTGAAAATGATGACGGCGAGGAAGATGACGACGTCGACGGAGGTGTCGCTGGTGGTGACGGTGACGATGACGACGACCGTCTCCCTCAGTGCAAGATCAAACGGAATTACTCCTGCGTCAAATGCGATTATTACACGCAAAATCCTCGCTTCTATCTGTACCATCAGAAAGAGACTCATGgcgagaagatgaaaatttACGAGTGCGCTCATTGTTTGTACGCGAGCAAGCACAGTCAGAAACTTCAAAGGCACATTCATATGGTTCACGTGATGGGTGGTGGTAAAAAGAGAAGCAAAGGGAGTGACTCCTCATGGCCTCCGGGGATTCCGAACAAGAAAACGAGGTTGAATCCTCCGTCCTTGATTCCACCGCCCCCACCGCCGACTTCACTTCCTTCTCAGAGCGATATTTATCAAATTGAAGAATCGGCCGGGGAAATCGAAGACCCGATCTACGGACCGGACGGAACGCAAATATTTAAGTGTTCAGTTTGCGATATGACAGCCAAGACTCAGGGCTTGATTGCTCGCCACGAGCGTATCGTTCACCTAAAGAAGAAATTCTTTCGCTGCGGTAAATGCAACTACGTCACTCATATGAAAGCCCGCTACACGAAACACGTCAAATATCATTCGATGCCGATGATCAAATGTGATATGTGCGACTTTAAAACGCCTTACAAGTGGAATTTGGATCGTCACAATAAGAACCATACGGGCGATGGCCCCTTCAAGTGTTCCATCTGTAAtttcaccgctgaaattaaaCAATCGTTGACGGTGCATGAAATGAATCATCACGTTCCGCCCGTCGGTCATTTTATACCGCCGAGTCGGCGACGGTTGAAAGTGGGCGCTTCCGACACGATGGGCATGGTGACGGAAGAGGATCAGATCGATCAGAGTGAATTGGAGTTGCTTCGCATGGAACGTGAAGGCGCCTACGAACAGAATCCGGCGGATTTCGTTCAGGCTCAACTCCACATACCGAGTGAGTCGACCACCATAACGAGCATCGCCGCCTCCGCCgtcatcaccaccaccacctccacctCTAGTCGAACTAAGCAAGAGCCATCCTCAACTCAAGCCACCCCTTCGTcgtcgccgccgccgccgcctcctCCCGTCGAGGCGTCACCACCTCCAACACCCCCACAGCCGCCGACCGCTCCCTCTGTCCCCGCCTCAGCACCCgtcgttgaaaagaaaaaaccgCCTCGACCGATCCCGAATTTAATTCCAATCAAATCACTTCACTCGCTGAATggcggtggcggtggtggtggtggctcCCCAGAGGATTCGTCAACGCTAAAAGATTTTGCTTCGATAGTGACGACAGCAGATGAAATCTCGCGAGAGGCGTCGTGTCAACAATTCCCACGCCCCGACAAAAAGACGTGCGACAgtttcaaaaagaaaaacgcctctttctttgACAAACTGAAGGAGAAATTGATGTCGAGCTCGTCTGAGGGCAATTTAACTTGCTCGCTTTGCGgATATGAAGCGAAGTGTCTGTCAGAACATATGAAACATCAAAAGTCTCATGTTCGTCTTAATGACGCTGACGGCAGCGAGGGCAGTCGTAGTCCACCGAATGAAATATCGTCGCAATCCACCATGGAGACGTCGTCCTCGACTCGGTGCCGCCACTGTAGGCAACGTTGTAAATCAAGTTCGGATCTGGTTCAACATTTAACCTGTTGCCCGGCTCTAGTTCGGGACGAGGaggtggaagaagaagaagaagaggaggaggaagaggaagaagaagaagaggaaaaaaagcaGGAAGTTGGCGAAAAGGCGGTGGTGGCGGCCGAACCGCCGCCGGCGCATAAGGCGAAGCTGGAGGATGAAACTAACAACAACCAGGTTCATCCGATGGAGAATCGGGTGTTCGTCTGGAATACGGTTGGTAAAGAAGAGCATTACACACCAGCGCCCCTACCACCACCCTTGTACCCGCTGGAAGACCGGCGCCGTGAGACGGTTGATGAAAAAGTGTACGTTGGCATCGAAGTCAAGCCAGGCTATGGTACCACGACAGCCAAGGGTCCAAGCAATGACATCACACCTCGCGATGTCAATACGAAAAAgGTGTTTAAATGCCCGCACTGTTCATTCTGGGCCTCAACCGCCTCACGTTTTCACGTTCACATCGTTGGTCACCTCAACAAGCGACCATTCCAGTGCTCACTCTGTCACTACAGCTCGAATTGGCGTTGGGACATCACGAAACACATACGCCTTAAATCGATTCGTGACCCAGGCCACGAAAAAGCCAAAGTCCTTCTCACGGATGAGGCCGGCCGTCGAAACTATTCGAAATACAACCAGTACCTGACGACGATGAAAATGGAAAATCAACAGACGGCGGCCAAACCACCCCGACGGATCCTCCCGAAAGATTTGAATTCGTCCAAAAGTGGCGTGAAACGCCCGCAGGAGGAGTCTGAAGAGGACGCCGAATTGTCTTCAGTGAAGAAAAAACCTCACCTCGAGAATAAAAAAACGATGTGGAAATGTAAAAAGTGTTACTTTCGCGACAATGATAGAGAAGTCGTTCTTGAGCACGTTCGCGACCACTACAGAAATTCAACTGGAAAGCGGAAGAAACCCATCGACGAAAATTCATCGCCACTGTCGTCGTCGTCCTCCCTCTCGCGGAATCAACCGCTTTTAGCCAAAGTGGAAACTCGTCAGTCGACTCCATCGGCCTCCGAtaatgacgacgacgacgacgatgatgatgatgacgacgacgGTGAAGATGAGCAGGAAGTTTTCGGTGATCATCGTCACGGAACGGCCGACGATACGGGCGATCTGTGTCCGGATTTTATGTGCGAAACCTGTCCGTATGTGTGCGACACTTGGAAAGAATTGGAGACTCACATGGAGAAGCATTTTGTTTGCACCGTCAGTGGGAAGCATTTTAAATGTCAGCACTGTTCTTACTTCGCGCAGGATAAAACtgaactgtCAGAACACATCGATTCTCACAGAGACCACCCGGACGGACCAACTTTCGCCTGCTACGACTGTCCATACATGGCCGTCTCTCGCCCTCAACTCGTTTATCATTCAAAACGGCACAACCGTGACGGCACCGATGCTGCCGACCAGCACCGCTGTCACAAGTGCTCCTATTCAGCTCGCAATAACACCGCCCTCGCTCTTCACGTTCGCCTTCACGGACGCACCAATCAGTCCGACTGCCAATCTTCCAAAGCCCTGCCTgatgTCAGCGGCGTCGACACGAGTAAACATCAGGACATCCCTCTCGTATGGGTGTCCAAACCGATGGGAATATCGAAAATGTACAAATGTCGTCACTGTCCTCAAATCAATAGCCGGAAAAGTGTCATCCTGTCGCACGAAAAGGGTCACAGTGACTTTCGTTCTAACCAATCGCCAAAGGCGGACATCGGTGGTGTCGAAATTTTACGATGTCCCGAGTGTAATTGGACCTGTACAGGTCCGACGCCTCTGTCGGCTCATTTGAAATTTCATCAGGGACTGTTTGGACAAGTTGTGGGAGTTGTTGAGACGGGTCGTTCTGATGAGGAACAAATgaatgaactgaaggataagGTTAACCAACGGGAGAAACAAGTCAACCAGGAAAACGCGATTCcggaagaaaaggaaaaagcgagACTTGAAAAGAAGGACAAAGAGAACAGAATGATTCATTTTTGTTCGATTTGTCCTGCCAGGTTTCTCTTTTCCACTGAAATGGACATTCATACGAGATTTCATGAAATGAAATTACCGTACAGATGTGACTCATGCTCTTACACAGCTCGACAGAAACAACATCTTATGGCCCATCTAAAGGTCCATACTGACGAATATCAGGAACGGACGAGCGTGCTTACTGAACTGTATCAAATCGCCTCAGGGAGCCCACGTCCTAAAATTGCTATCGTATTGGGAGGTAAAGACTCGAATGAGTCTGTTTGGGTGGTTGTGCCTAACGAGGATGCCTCCAAAGGTGACGATGTGCCATGCGACAACGTCTCCGATGATCAACAAATAAAAGAGGAAGAGGCTGCCTATTTGAACAACAACAATAACGTTAGCAGTAAATCGGGAAAGCGTTTCGCCTGCAGTAAATGTCCCGCGGAATTTATAAAAAACGATCCGCTCGTCTACCATCAAACGTTGCACGGCGGTCCGGGACCGCACCGGTGTAAATATTGCGACTACGCTGTCAAAACATACGGTAATTTGATTCGTCATGAGTACGTTCACAAAACCGCCGGATCTCATAAACGACAGCCTTCGGAGCCCGTACCAACCTCGGGCACGGACCTGTTCAAACAGAAAAATGAAGCGAACTCGGCGGCAGCGGCGGTGGCCGCCTCTACTGTTGTGGCCCCCGCCATAGTTGCCAAACCACTGTCACCACCCCCCGCTCAACTCTACATGGACCCTGAATTTGGGATTCTGATACACGGGAGCCCCGAATTTATTTATCCTACGTACCTGAAGAATGGAAAAACGAAGGAGAAGCGTTATAAGTGCCATAAGTGTCCGTCGGCTTTTGAAAAACGTGAACAGTATAAGATACACTTGTCGTTGCATGGGTCGAAGCAAAGGTACAACTGTGAAAGATGCGATTATTCGGTGAAATACTACGCGAATTTCACTCAGCACATGAAAAAACACGAAGAGTGCGAGGCCAATAGGAAAAAACTTGCGGAGACACCCAGTGCGTCCGACGACAGTGCCATCGATGCCACCACCCATGAAGCGTCTACCGATGAGTCGTCGTCGAAAACGGTGGCCGTCGGTGAGCCGGCACAGCGGCGTAGCTGCGCCGCCGCCAAAACTATGAAAATGTCGACGGCCGAACAACAAACGTTGATGATCCTTCAACAGAGGCGAATAGCGGCAGGGGGCGCCGTTGGCAGCTCTACAACAGGCGGTGGTGACCACCGTGACGCTCCCGCCATTAATCGTTGTCCTCACTGTCCGTATACGAACAGTCGGAAGGACGGTGTTGCGAGCCACGTTCGTTGTCATGCCGACAAAGGAGCAGCTTATACCTGCAAATACTGTGACTACAACGTGCCTCAGCTTCATTTTCTCAGGGAACACGTCAAGACTCATTTTATGGCGAGCAAATACGTCAAACCCGACGCTTACATGAAAATTGAACGAATGGAAATATGGGCCGAACCACTAGTAACAACCCCCGACCAACAACACCCACCTCAATCAAACGCCAAATTTCTCGTTTTTAAAGACCAAGGTGACACCCAAAAAAACCCCCAAAAACGATTCCTTCCCCATTCAACACATCTCGTCGCCTCCGATGACGCCACCTCAGGTCGCGTCTATATCAATTTAAAAACCGGCGAAGAAGCGGTTGAAATGGACGAAGATGACACGAAGTTGGCGCAAGACGACAACACGGAGGTGAACGACGAAGAGATTGTGGATGAGGGGGAGGAGTGCTGCAGTGTCCCCGAGAAGAAACAAAGATTAGAGTTAAGTGAAAAGGATACCACCGATAATTCTAACGTTGACTCCGCCGAGGAGGCCTCCGAGTCCGAACATTTTGACTTCGGAGAGTCTCACTAA
Protein Sequence: MSSARPAAIRNGDSLLVKNISSGGAQFYKETISKGLADDSQEEIKGDRGGRTDEEDFENDDGEEDDDVDGGVAGGDGDDDDDRLPQCKIKRNYSCVKCDYYTQNPRFYLYHQKETHGEKMKIYECAHCLYASKHSQKLQRHIHMVHVMGGGKKRSKGSDSSWPPGIPNKKTRLNPPSLIPPPPPPTSLPSQSDIYQIEESAGEIEDPIYGPDGTQIFKCSVCDMTAKTQGLIARHERIVHLKKKFFRCGKCNYVTHMKARYTKHVKYHSMPMIKCDMCDFKTPYKWNLDRHNKNHTGDGPFKCSICNFTAEIKQSLTVHEMNHHVPPVGHFIPPSRRRLKVGASDTMGMVTEEDQIDQSELELLRMEREGAYEQNPADFVQAQLHIPSESTTITSIAASAVITTTTSTSSRTKQEPSSTQATPSSSPPPPPPPVEASPPPTPPQPPTAPSVPASAPVVEKKKPPRPIPNLIPIKSLHSLNGGGGGGGGSPEDSSTLKDFASIVTTADEISREASCQQFPRPDKKTCDSFKKKNASFFDKLKEKLMSSSSEGNLTCSLCGYEAKCLSEHMKHQKSHVRLNDADGSEGSRSPPNEISSQSTMETSSSTRCRHCRQRCKSSSDLVQHLTCCPALVRDEEVEEEEEEEEEEEEEEEEKKQEVGEKAVVAAEPPPAHKAKLEDETNNNQVHPMENRVFVWNTVGKEEHYTPAPLPPPLYPLEDRRRETVDEKVYVGIEVKPGYGTTTAKGPSNDITPRDVNTKKVFKCPHCSFWASTASRFHVHIVGHLNKRPFQCSLCHYSSNWRWDITKHIRLKSIRDPGHEKAKVLLTDEAGRRNYSKYNQYLTTMKMENQQTAAKPPRRILPKDLNSSKSGVKRPQEESEEDAELSSVKKKPHLENKKTMWKCKKCYFRDNDREVVLEHVRDHYRNSTGKRKKPIDENSSPLSSSSSLSRNQPLLAKVETRQSTPSASDNDDDDDDDDDDDDGEDEQEVFGDHRHGTADDTGDLCPDFMCETCPYVCDTWKELETHMEKHFVCTVSGKHFKCQHCSYFAQDKTELSEHIDSHRDHPDGPTFACYDCPYMAVSRPQLVYHSKRHNRDGTDAADQHRCHKCSYSARNNTALALHVRLHGRTNQSDCQSSKALPDVSGVDTSKHQDIPLVWVSKPMGISKMYKCRHCPQINSRKSVILSHEKGHSDFRSNQSPKADIGGVEILRCPECNWTCTGPTPLSAHLKFHQGLFGQVVGVVETGRSDEEQMNELKDKVNQREKQVNQENAIPEEKEKARLEKKDKENRMIHFCSICPARFLFSTEMDIHTRFHEMKLPYRCDSCSYTARQKQHLMAHLKVHTDEYQERTSVLTELYQIASGSPRPKIAIVLGGKDSNESVWVVVPNEDASKGDDVPCDNVSDDQQIKEEEAAYLNNNNNVSSKSGKRFACSKCPAEFIKNDPLVYHQTLHGGPGPHRCKYCDYAVKTYGNLIRHEYVHKTAGSHKRQPSEPVPTSGTDLFKQKNEANSAAAAVAASTVVAPAIVAKPLSPPPAQLYMDPEFGILIHGSPEFIYPTYLKNGKTKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYNCERCDYSVKYYANFTQHMKKHEECEANRKKLAETPSASDDSAIDATTHEASTDESSSKTVAVGEPAQRRSCAAAKTMKMSTAEQQTLMILQQRRIAAGGAVGSSTTGGGDHRDAPAINRCPHCPYTNSRKDGVASHVRCHADKGAAYTCKYCDYNVPQLHFLREHVKTHFMASKYVKPDAYMKIERMEIWAEPLVTTPDQQHPPQSNAKFLVFKDQGDTQKNPQKRFLPHSTHLVASDDATSGRVYINLKTGEEAVEMDEDDTKLAQDDNTEVNDEEIVDEGEECCSVPEKKQRLELSEKDTTDNSNVDSAEEASESEHFDFGESH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -