Basic Information

Insect: Corythucha ciliata
Gene Symbol: Znf711
Assembly: GCA_038030265.1
Location: CM075941.1:49809831-49810835[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.7 3.2e+02 3.3 0.2 1 11 74 84 74 97 0.77

2 9 0.0003 0.058 15.1 0.4 3 23 109 129 107 129 0.96

3 9 5e-05 0.0097 17.5 0.5 1 22 135 156 135 159 0.90

4 9 6.6e-07 0.00013 23.5 0.5 1 23 165 187 165 187 0.98

5 9 5.6e-05 0.011 17.4 3.9 1 23 193 215 193 215 0.99

6 9 8.5e-05 0.016 16.8 0.6 1 23 221 243 221 243 0.98

7 9 1e-05 0.002 19.7 1.7 1 23 249 271 249 271 0.99

8 9 0.00037 0.072 14.8 2.0 1 23 277 300 277 300 0.94

9 9 0.00087 0.17 13.6 2.0 1 23 306 329 306 329 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.7	3.2e+02	3.3	0.2	1	11	74	84	74	97	0.77
2	9	0.0003	0.058	15.1	0.4	3	23	109	129	107	129	0.96
3	9	5e-05	0.0097	17.5	0.5	1	22	135	156	135	159	0.90
4	9	6.6e-07	0.00013	23.5	0.5	1	23	165	187	165	187	0.98
5	9	5.6e-05	0.011	17.4	3.9	1	23	193	215	193	215	0.99
6	9	8.5e-05	0.016	16.8	0.6	1	23	221	243	221	243	0.98
7	9	1e-05	0.002	19.7	1.7	1	23	249	271	249	271	0.99
8	9	0.00037	0.072	14.8	2.0	1	23	277	300	277	300	0.94
9	9	0.00087	0.17	13.6	2.0	1	23	306	329	306	329	0.96

Sequence Information

Coding Sequence: ATGAAATCACTGCACTATCTCAACCCTTCCACCACTTATCCATGTATTTTCAGTGAAAATGACTTGGGTTTCCATGAAATTAAAATTGAGCTGGACGAGGGGAAGCTGAAATCACCAGAAACAGGAGTGTGCGTGGTTATGAAAAAGGAGAATTTAATAGAAAACACCTCGCATGAGACGGCAAGGGACGATGACCGTCGTCAGAAGTACGGTAAGATTTTCACATGCAGCGTCTGCGACTATCAGACAGCGTTCAAACCTCGAATGGCCCCGCACCTGGCCGTTCACAAGAAGAGCAGGGCCAAACGAGTCGCTAAGGTGATTTGCTTGGAATGCGGCTACGTGTGCTCCTATCCGTTCGACATGAAACGTCACGTCATGTCGCACACAGGTGAGAAACCGTTTGCTTGCCCCATGTGCTCATTTTCCACGGCACGACCGTACGATCTGAGACGTCACATGACGTCCTCGCGTCACGGTCTCGTTGAAAATTTCACTTGCTACGACTGCGGTTATGCCAGCCCTCGTAAAGATCTTCTAAAACGTCACATGAAAGTACACAACCAGGACAACCCGTATAAATGCTCCGAGTGTGGTTATTCGTGCGGACGTAAAGAAGTTCTTCACCGTCACTGGCGCATGCACACTGGGGAGCGACCCTATCGCTGTGACGTCTGCGAATATTCGGCAACGCGCAAAGACCTCCTTAGAATGCACAAACGAGGTCATTCAGGTGTTCGTCCCTATCAGTGCGGCCACTGTGACTTCACCGCTTCACAAATGAGCACCCTTAAGATACACATTCGCACGCACACCGGTGAGCGACCCTACGAGTGTCCACACTGTCAGTATAGAGCGGCTCAAAAGTCGGCACTAAAAAATCACGTCGTCTCGTGTCACTCGGGCGAACGTCCtcacaattgttttttttgtccaagCTCATACGGCCGCAAGGCCGATCTGAATAAACACATTAAGAAAGTCCACAAAGTCGTCGATAAATAG
Protein Sequence: MKSLHYLNPSTTYPCIFSENDLGFHEIKIELDEGKLKSPETGVCVVMKKENLIENTSHETARDDDRRQKYGKIFTCSVCDYQTAFKPRMAPHLAVHKKSRAKRVAKVICLECGYVCSYPFDMKRHVMSHTGEKPFACPMCSFSTARPYDLRRHMTSSRHGLVENFTCYDCGYASPRKDLLKRHMKVHNQDNPYKCSECGYSCGRKEVLHRHWRMHTGERPYRCDVCEYSATRKDLLRMHKRGHSGVRPYQCGHCDFTASQMSTLKIHIRTHTGERPYECPHCQYRAAQKSALKNHVVSCHSGERPHNCFFCPSSYGRKADLNKHIKKVHKVVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -