Basic Information

Insect: Corythucha ciliata
Gene Symbol: L
Assembly: GCA_038030265.1
Location: CM075940.1:4668597-4679167[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.5e-05 0.0029 19.2 0.9 1 23 83 105 83 105 0.98

2 19 0.071 14 7.6 6.5 1 23 111 133 111 133 0.97

3 19 1.1e-06 0.00021 22.8 4.1 1 23 139 161 139 161 0.99

4 19 1.4e-05 0.0028 19.2 0.2 1 23 167 189 167 189 0.98

5 19 4.7e-05 0.0091 17.6 0.1 1 23 204 227 204 227 0.96

6 19 0.77 1.5e+02 4.4 0.0 1 23 293 316 293 316 0.87

7 19 0.15 29 6.6 1.0 2 23 326 348 325 348 0.92

8 19 0.086 17 7.4 0.3 3 23 408 428 407 428 0.98

9 19 0.00044 0.085 14.6 0.1 2 23 449 470 449 470 0.96

10 19 0.016 3.2 9.6 0.6 3 23 480 501 478 501 0.94

11 19 0.0011 0.21 13.3 0.6 1 23 606 629 606 629 0.98

12 19 4.8 9.3e+02 1.8 0.1 9 23 706 721 698 722 0.81

13 19 0.0027 0.53 12.1 3.9 2 23 732 753 731 753 0.96

14 19 0.035 6.7 8.6 0.4 1 23 763 785 763 785 0.96

15 19 0.33 63 5.5 0.2 2 23 793 814 792 814 0.95

16 19 0.051 9.9 8.1 0.2 2 23 888 910 887 910 0.94

17 19 1.1 2.2e+02 3.9 0.0 2 23 933 954 932 954 0.95

18 19 0.00068 0.13 14.0 0.1 1 23 962 984 962 984 0.97

19 19 3.1 5.9e+02 2.5 2.1 1 23 991 1013 991 1013 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.5e-05	0.0029	19.2	0.9	1	23	83	105	83	105	0.98
2	19	0.071	14	7.6	6.5	1	23	111	133	111	133	0.97
3	19	1.1e-06	0.00021	22.8	4.1	1	23	139	161	139	161	0.99
4	19	1.4e-05	0.0028	19.2	0.2	1	23	167	189	167	189	0.98
5	19	4.7e-05	0.0091	17.6	0.1	1	23	204	227	204	227	0.96
6	19	0.77	1.5e+02	4.4	0.0	1	23	293	316	293	316	0.87
7	19	0.15	29	6.6	1.0	2	23	326	348	325	348	0.92
8	19	0.086	17	7.4	0.3	3	23	408	428	407	428	0.98
9	19	0.00044	0.085	14.6	0.1	2	23	449	470	449	470	0.96
10	19	0.016	3.2	9.6	0.6	3	23	480	501	478	501	0.94
11	19	0.0011	0.21	13.3	0.6	1	23	606	629	606	629	0.98
12	19	4.8	9.3e+02	1.8	0.1	9	23	706	721	698	722	0.81
13	19	0.0027	0.53	12.1	3.9	2	23	732	753	731	753	0.96
14	19	0.035	6.7	8.6	0.4	1	23	763	785	763	785	0.96
15	19	0.33	63	5.5	0.2	2	23	793	814	792	814	0.95
16	19	0.051	9.9	8.1	0.2	2	23	888	910	887	910	0.94
17	19	1.1	2.2e+02	3.9	0.0	2	23	933	954	932	954	0.95
18	19	0.00068	0.13	14.0	0.1	1	23	962	984	962	984	0.97
19	19	3.1	5.9e+02	2.5	2.1	1	23	991	1013	991	1013	0.93

Sequence Information

Coding Sequence: ATGAGTGATTCCGTCGTCCTCTTCAAGGGCAATAGTTCGAGACTTCAACTTCTTATCGAGAAAATACAGGCGAACAAGGAGAATCATAATGTCAGTGAGCAGGATATTAAAGATGCTCTCGCAACCGAGGGAGCATCCTCATGGAGCTCCGAGGGACGTAGCTCACCACCATCTACGCCCAATTCAGCAACCGATCTGGCCGACTCAGATCTCGCTTTCACTGTGGGTGTAACAGACGTCACACCGTATCCTTGCCAATTCTGCGAAAAGGCATTCCCAAGACTTAGCTACCTTAAGAAACATGAACAGAGTCACTGTGAGCACCTACCGTTCATATGCGAATTTTGCAAGAGGAGATTTAAACATAAAAGAAGCAAAGACAGACATTTAAAGCTTCACACTGGGGACAAGCGCTACAAATGCACTCATTGCCAGGCAGCCTTCGCCCGGAGCGACCATTTAAAGATTCATATGAAAACTCACGACAACCAAAAGCCATTTCAGTGCACTGTGTGCAATCGGGGGTATAACACAGCGGCTGCTTTGACCTCTCACATGCAAAATCATAAGAAGGCAGTCGAAGCCGAGGTGTCTGCGGGTGGAAGTTTATTTAAATGCCTTGAGTGCTCTGAGGTCTTCGCTAAACCTGAGGATTTGACCAATCACATGGCCAACGAGCATGCGAATGAGTCGAAGAAACGTTCCAGTACGCCTTCTAGATCTCTCCTCACGTGTATCTATTGTACTAAAGACAATTTTACTTCGCTTGAATCCCTTCAACTCCACGTTCAAGCTATGCACGCATCAATGTTAAACGGAGGGCACCCATACAATGCAAGGAACTTACTCCTTGTCAATTGTCTAACCAGCACGGGGTTCCCCTGCCGCCTCTGCACGATGGTATTCCCATCAGCCGTCATCCTTCAGGCTCACGCTTTGGCCGCCCACGGAATCGCTGACGCTAAAACTGACATTCAATGCCCTCATTGTCGAATGGCTTTCTTTTCGATCAACAGCTTCGCCGAGCATTACTTTTCAATGCACGGCGCACATCTACCGAAAGCGAAAAGCCCAATCGACCAAGTTTTACCTACAGATCTGACGGTGGTAAGACGGGACCACGAAAATAAACCGTCAATGGCGAAAAAGAGCCGTTATTTCCCATCTACCCCTGATATTAATCGAAATATCTCGCAATACGACCATCAGGGCATTCTTCTCTGCAATCAGTGCAACGCCGCACTCCCTGACTTCGAATCGTTCCGTAATCATTTAAAATCACATTTGGAAGAGTCTTCGTTCCTTCCCACGCTTCCTCTTCGCCACGCTCAACCTCAACCCGGCGTTTGCCCCTACTGCGGCGTGCATTTCACGTCACCCGAAGACGCTGCTCGACACATTGGCTCGCATTTCGTCTCGGTTGTGACTGAATACGGCTGTCAGAGTTGTTACAAATTGTATACGAAATCCGACGACCTTCAGAAACATCTCATGGAAATGCATACGCATCATTTGTACAAATGCGTTTTATGCAAGGATTTATTCGAATCAAAAGTAGCGATTCAGGTTCACTTCGCTGTGAAACACTGCAGTGAAACTAAGCAATACAAATGCACGATTTGCCCTGATGGTCCCGCCCTGCATTCCGAAATAGAATTCAATCTTCACGTTCGCACATCCCACTGCAACTTCAGCATACCTTCACCCAAGCCAACCTGCGTCTCCCCCCCTAGAATTCAGCGATGCATTTTCTGTAACATGACATTTAACACAGAAATCGAAATGCAATTTCACCTCTCAGTCCACACGAAACAGTTTCAGTGTACCATGTGTCCAGAGGCATTTCACGTGGAGTACCTCCTGGACAAGCACATTCAAATGAATCATCCAAGTCAGCATCACGCTGTGTCGAAAGAAGAGGAATCTCGCGACTCGGACAAGCCTCTTCTCAACGGGTTCTCGCATCCACCCGGTTTTGTTCCCGCTTCGACCGCTCAGTCGGGCAACAGTAACAGTAGCTCATCGATTGAAACGAACAGGAAAATGGACAGTTCACAGGCTTGCGCGAACAACAATAATAACCCCCCTGGTCCCTGCGATCTGTGCGAAGCGGGTGAATTTTCGTCTGAGGCTGAATTGAGTGCGCATAGGAAATTAGTTCATCATACAAAGACTTCTTCGAAAGTGACTCTTCACTGTGCTTACTGCAAGGAGAACTGTAAATCACGGGCTGAACTTGAAACTCACATGAAATCCCACTGTCAAGCTGCAGCAGGGGCGAGTAAACATAAATGTAATATTTGTGATGAAATATGTATATCAGCAGCCGTGTTGGCCGAACATAAGCTTAATCATTGCAAGGTTATGTATGGCTCCACTTGCGTCAGCTGTAAAGTGTCCATCACAAATGAAGAAAGTTTCATTCGTCACATCATTCAGCACGCGAATCCTCCAGGCAGTGGACAGCAATTGACTCTGCCCGTCGCCTGTGTCATATGTCGGCGAACTCTATCGAGTGAGCTGGAAACCCGTCTTCACGCGAAGTTCCATCTTCAAATGGAACTAGCTCAATGCTCAATGTGCCTTCAAAGTTGCGAACGCGGGTTGATTGTTGAGGGCCTCTGTAGACAGTGCAACGCAGCAGCGAAATCTTCTCCGTTGAAATGCAGTCAGTGCTACCTTAAATTTGAATCGATTTCCTCTCTCGACTCACATTATATCGTCGCtcataaaaaccaaattttgaatGATGACGCTATGGAAACCGAAACGACCGAGTCCCAAGAAGAAGAAATCAAGTGTCGCCTTTGTTCAATCATTCTTCCGTCAGTTGGCCAGCTACAAATTCACTTGATCGAACACACTTTCGCTGGGTGCTCGACCTTTTCGTGTTACATTTGCAGTTCTGTATTCACGACGGCCGTCGGCCTTCAGAGTCACATTATGGAGCACGGTCCTTCGGCTCGACCGTATGACTGCTCTAGGTGCTCTTCAAAGTTCTATTTTAGAGCCGAACTCGACAACCACAGTTTTTCCCATTCCGATAACTCTAACGAATCAAAACACGGGTATGACTACCAGAGTCGTCGAAAAAATGACACTGACTCTTCAAGGCACAAAATGTACGGCTACGCTCGATCTGAAAAGAATTCGCCACCCGAGGAACCTTCGGCCCAGCCGTCTGACTTGAGCTTAGCCAGCTCCGAAGCCAAAAAAGCTCTCGGAGAGAGTGAGAGCGACCAAGTTATAAAAGAGGAGACTCAAGATTAA
Protein Sequence: MSDSVVLFKGNSSRLQLLIEKIQANKENHNVSEQDIKDALATEGASSWSSEGRSSPPSTPNSATDLADSDLAFTVGVTDVTPYPCQFCEKAFPRLSYLKKHEQSHCEHLPFICEFCKRRFKHKRSKDRHLKLHTGDKRYKCTHCQAAFARSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKAVEAEVSAGGSLFKCLECSEVFAKPEDLTNHMANEHANESKKRSSTPSRSLLTCIYCTKDNFTSLESLQLHVQAMHASMLNGGHPYNARNLLLVNCLTSTGFPCRLCTMVFPSAVILQAHALAAHGIADAKTDIQCPHCRMAFFSINSFAEHYFSMHGAHLPKAKSPIDQVLPTDLTVVRRDHENKPSMAKKSRYFPSTPDINRNISQYDHQGILLCNQCNAALPDFESFRNHLKSHLEESSFLPTLPLRHAQPQPGVCPYCGVHFTSPEDAARHIGSHFVSVVTEYGCQSCYKLYTKSDDLQKHLMEMHTHHLYKCVLCKDLFESKVAIQVHFAVKHCSETKQYKCTICPDGPALHSEIEFNLHVRTSHCNFSIPSPKPTCVSPPRIQRCIFCNMTFNTEIEMQFHLSVHTKQFQCTMCPEAFHVEYLLDKHIQMNHPSQHHAVSKEEESRDSDKPLLNGFSHPPGFVPASTAQSGNSNSSSSIETNRKMDSSQACANNNNNPPGPCDLCEAGEFSSEAELSAHRKLVHHTKTSSKVTLHCAYCKENCKSRAELETHMKSHCQAAAGASKHKCNICDEICISAAVLAEHKLNHCKVMYGSTCVSCKVSITNEESFIRHIIQHANPPGSGQQLTLPVACVICRRTLSSELETRLHAKFHLQMELAQCSMCLQSCERGLIVEGLCRQCNAAAKSSPLKCSQCYLKFESISSLDSHYIVAHKNQILNDDAMETETTESQEEEIKCRLCSIILPSVGQLQIHLIEHTFAGCSTFSCYICSSVFTTAVGLQSHIMEHGPSARPYDCSRCSSKFYFRAELDNHSFSHSDNSNESKHGYDYQSRRKNDTDSSRHKMYGYARSEKNSPPEEPSAQPSDLSLASSEAKKALGESESDQVIKEETQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -