Basic Information

Insect: Corythucha ciliata
Gene Symbol: -
Assembly: GCA_038030265.1
Location: CM075938.1:21787254-21790738[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.48 92 5.0 0.9 1 20 415 434 415 437 0.93

2 15 0.016 3 9.7 2.2 1 23 494 516 494 516 0.96

3 15 0.33 63 5.5 0.2 2 23 527 549 526 549 0.94

4 15 3.6e-07 6.9e-05 24.3 0.1 1 23 572 595 572 595 0.94

5 15 0.0042 0.8 11.5 0.6 1 23 607 630 607 630 0.96

6 15 0.01 2 10.3 0.0 2 23 652 674 651 674 0.95

7 15 0.0045 0.86 11.4 0.5 1 23 687 709 687 709 0.95

8 15 0.13 24 6.8 1.3 1 23 730 752 730 752 0.94

9 15 0.1 19 7.2 1.0 2 23 759 780 758 780 0.94

10 15 1.6e-06 0.00031 22.3 2.1 1 23 795 817 795 817 0.98

11 15 2e-07 3.9e-05 25.1 0.7 1 23 823 845 823 845 0.98

12 15 0.00071 0.14 13.9 0.4 1 23 851 873 851 873 0.98

13 15 0.09 17 7.3 5.0 1 23 879 901 879 901 0.98

14 15 0.00015 0.03 16.0 3.2 1 23 907 929 907 929 0.99

15 15 4e-05 0.0078 17.8 0.6 2 23 936 958 936 958 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.48	92	5.0	0.9	1	20	415	434	415	437	0.93
2	15	0.016	3	9.7	2.2	1	23	494	516	494	516	0.96
3	15	0.33	63	5.5	0.2	2	23	527	549	526	549	0.94
4	15	3.6e-07	6.9e-05	24.3	0.1	1	23	572	595	572	595	0.94
5	15	0.0042	0.8	11.5	0.6	1	23	607	630	607	630	0.96
6	15	0.01	2	10.3	0.0	2	23	652	674	651	674	0.95
7	15	0.0045	0.86	11.4	0.5	1	23	687	709	687	709	0.95
8	15	0.13	24	6.8	1.3	1	23	730	752	730	752	0.94
9	15	0.1	19	7.2	1.0	2	23	759	780	758	780	0.94
10	15	1.6e-06	0.00031	22.3	2.1	1	23	795	817	795	817	0.98
11	15	2e-07	3.9e-05	25.1	0.7	1	23	823	845	823	845	0.98
12	15	0.00071	0.14	13.9	0.4	1	23	851	873	851	873	0.98
13	15	0.09	17	7.3	5.0	1	23	879	901	879	901	0.98
14	15	0.00015	0.03	16.0	3.2	1	23	907	929	907	929	0.99
15	15	4e-05	0.0078	17.8	0.6	2	23	936	958	936	958	0.96

Sequence Information

Coding Sequence: ATGAAGTTCACCCTGGACATTCATCCAAACGAAACTTTCGCCGATTTGAAACGACGCGTGGAAATAGAGTCGGGAGTCTCCCTTGACTTCCGGGATATAACCGCCAATAACAGTCAGACTATTAATGAACATCAAAACGTCGTCAGCTATTTCAGCGGTGGCATGGACGGAGGAGGTGGTAGTCTGGGTGGTGGAGGCGTGTTTGACCAAGTACAGGAGGTGGTGTGTGCCGTTCCCAGTTGCGGTAATAAGAAGTCGAAAAATCCGGACAAGtcttttTTTGATTTCCCGGACGAGGAGATTCGGTGTCATCAATGGGTGCTGTACTGTCGTCGAATTGCAGCCGAGATAAGTTCAAACGCGGCAAACGCCACGAAATTCCCCATATCCCCCTCGTCGTCGACTCAAACAGCTGCTCATTTGGCTCGAATCAGTCAAACGGACAACATCGCCGGACCAGGTTCAGCGATTTGCTCTGATCACTTTAAAGCCGATCAATTTGTCAAAAACACGACGAGCCTCCTCAAACGTACCGCCGTTCCCAGTATCAACCCCGAGATGCCAGCCTCGGTGGTCGGGTTCGCCTCGCCTGGAGCCTCTCGACCGCTTACATCTTCTTCTCCGCCCGTCGGTAAAATCACACCATCGGCGGCGACGAGAACGTCCTCATTCAAACCTCAAAGGACAACCCGCCCAATCGACGCTCTTTACCTCTGTCGAATGTGTGCCAAACCGAGTCGAAACACTGTGTTCATCTACTCAGCCGAGGGTCAAAAATTGCAACTCGCCGAGAAAATCAATACGAACCTTCCCATTCAAGTGAAAATGACCGACTTCCTGCCCAAACAGATATGTCAGTCCTGTATCAAATCCTTGAACCATTCGCATCGCCTGATTGAAAAAGCCGTTGAGACCGACTCAAAACTAAAAGAAAAGTTTAAaacgagaaaagaaaaacaaaacttgaCCGAGCACTGCCTATTGTGCCTCAAAGGGCAGCTCAAAATTGTTTTGGAGCCAGAACCTGCTGCGTCGACCCCATCGTCGCATCAAGAAAATGGTGTCGCAGCCAAGGTTGTTTCGTCCAATGTGGAGGAAGAGGATGAAGACGACGGTCAGTTGCTGGAAGAAGTGGATGACACTGCGGATGATGAGATATACTCGTGTCGTTTGTGTGGACTTGAACTTTTGGAACTGGGTCCTGCTTTGGAGCACGCTATCTCACACTCGGAGGCTGGACTGTTTCAGTGTAGCGTTTGCGAGAACGCTTACGTGAGCACTGAGGAGTTGGCTGAACATTTTAATTGTCACAGGCCCGGATACAGCGCCGATAGAGACTTCACCTGTTTCAAGTGCTGTTCATCTTTCAAAACTGAGTCTCTTCTGTACGACCACGCGTGCACCGAGGTGACGCTATTTCCAACCGTCCCGTCATCGACGCGTCCGTCAGTCTCACCGCCTCGCTCGTCACCGCTCAATCACCGTTGTACCATTTGCTACAAGTTTTTCCCGACGGAAATCCTCCTCGACGTCCACACTAAGTTTCACACGGACGCCGCCGCTGCCGGCACGCCTCTCCCGTGCGACTACTGCTCCTCCAAATTCGACGACGAGACTAAAATGTACGAACACGTTCGTCTGGAGCACCCTTTTCTAACTAAGTTGCCTCAGACGTCATCATATGACTCATCGCAGGTTGATCGTCAAATGGCATTCCCCTGTGACATCTGTGGGAAAAGTTTCCCCAAAAAGGCGCAACTTCGAAACCACATGAGTGCTGCGCACTTTTTCCGTACGAACAAAGGCGAGAAGCCTTGTTTTTCTTGCAAGATTTGTTTCGAAACTTTCCCATCGACCGGCCACGCCGTCGTACACATGGAGTCGAGCCATTCAGACTCCACCCAGGACCAGACATCGTACAGCTTTGAGATGATGAATTTATTCAAGCTGCTCATCTGTGAATATTGTGAAAAGATTTATGGAGAAGCTGTAGCTTTGAATAAACACAGAGACACCGTTCATTTGTCAAGCTCCATCGACGACATCAAAGTCGACTCGTTTGAGTGTAAATGGTGCAAAAAAGGGTTTCCAACCTACGAGTCCATGAGTGACCACAAGTTGGGACACAGTGCGACGGACGACGTGCCGAGTGAGTATACGGGTGACGCGTCACACCTCCCCGTCTATTTCCTTTGTCAGTTCTGCGACCGCCCCTTTATGAACTACATGAAATACACGGAACACACGACCATACACTTTGGTCATGAACCGTTCCTATGCCGGACCTGTTTGAGCCGGTTTAAGACGCTGGACGAAGTGATAGCCCATAGAAAGACTCACGGTAACGTCGAACCGGTGGAAGACTATGATTCTAATCGACCTCACGAGTGTCATTATTGTGATAAGTCGTTCGCTATTGAGGATGCTCTGACGAAACATATAAGAATGCATACAGGGGAGAAGCCTTTCACCTGTAATATATGTGGAAAAGGGTTTTCTCAGAGTTCTGgTTTAAACACCCACAAAAAAGTTCACTCTGAAGAGCGCCCTTTCAAATGCGTTATATGCCCTCGATCGTTTAAAATCAAAGGCGACCGAGACGTTCACATTCGTAAACATAGCGGAGAGCGTCCATTCAAGTGTGAGTTCTGTTTCAAAGCCTTCATGACTCAGCACGTCTACAGTCAACACAAGAAAATCCACACGGGAGAACGCCCCTACAAATGCGACGTCTGTCACGTCGCCTTCCGGCGTTCGCACGTTCTAACCGTTCACAAAAGAATTCACACGGGTGAAAAACCCAACGTGTGCGATGTATGCGGCAAACGTTACCGTCAAAAAGGCGATATGCTCAAACACAAAAGATCCGTCCACGGTGGCCAATCGACCGGTTCAGCCCTGTTTCCTTTAACCTCAGTCTCGACGCAAAGCGTCACGGATTTAACTCTAATGCCGACGCCCCAGGCGGATGCTTTCGTTTCTACTGAAGTTCCAATTATCTCGGCAGACACCCTCAGAGATGCTCAGATTTTATTCGattgttga
Protein Sequence: MKFTLDIHPNETFADLKRRVEIESGVSLDFRDITANNSQTINEHQNVVSYFSGGMDGGGGSLGGGGVFDQVQEVVCAVPSCGNKKSKNPDKSFFDFPDEEIRCHQWVLYCRRIAAEISSNAANATKFPISPSSSTQTAAHLARISQTDNIAGPGSAICSDHFKADQFVKNTTSLLKRTAVPSINPEMPASVVGFASPGASRPLTSSSPPVGKITPSAATRTSSFKPQRTTRPIDALYLCRMCAKPSRNTVFIYSAEGQKLQLAEKINTNLPIQVKMTDFLPKQICQSCIKSLNHSHRLIEKAVETDSKLKEKFKTRKEKQNLTEHCLLCLKGQLKIVLEPEPAASTPSSHQENGVAAKVVSSNVEEEDEDDGQLLEEVDDTADDEIYSCRLCGLELLELGPALEHAISHSEAGLFQCSVCENAYVSTEELAEHFNCHRPGYSADRDFTCFKCCSSFKTESLLYDHACTEVTLFPTVPSSTRPSVSPPRSSPLNHRCTICYKFFPTEILLDVHTKFHTDAAAAGTPLPCDYCSSKFDDETKMYEHVRLEHPFLTKLPQTSSYDSSQVDRQMAFPCDICGKSFPKKAQLRNHMSAAHFFRTNKGEKPCFSCKICFETFPSTGHAVVHMESSHSDSTQDQTSYSFEMMNLFKLLICEYCEKIYGEAVALNKHRDTVHLSSSIDDIKVDSFECKWCKKGFPTYESMSDHKLGHSATDDVPSEYTGDASHLPVYFLCQFCDRPFMNYMKYTEHTTIHFGHEPFLCRTCLSRFKTLDEVIAHRKTHGNVEPVEDYDSNRPHECHYCDKSFAIEDALTKHIRMHTGEKPFTCNICGKGFSQSSGLNTHKKVHSEERPFKCVICPRSFKIKGDRDVHIRKHSGERPFKCEFCFKAFMTQHVYSQHKKIHTGERPYKCDVCHVAFRRSHVLTVHKRIHTGEKPNVCDVCGKRYRQKGDMLKHKRSVHGGQSTGSALFPLTSVSTQSVTDLTLMPTPQADAFVSTEVPIISADTLRDAQILFDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00373149;
90% Identity: iTF_00373149;
80% Identity: iTF_00373149;