Ccil000802.1
Basic Information
- Insect
- Corythucha ciliata
- Gene Symbol
- lola
- Assembly
- GCA_038030265.1
- Location
- CM075937.1:4804632-4829384[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9e-13 6.3e-10 39.8 0.0 3 39 809 846 807 850 0.90 2 4 8.4e-12 5.9e-09 36.7 0.0 1 39 861 899 861 902 0.95 3 4 3.2e-16 2.3e-13 50.9 0.0 2 45 917 961 916 961 0.98 4 4 1.1e-15 8e-13 49.1 0.0 1 40 968 1008 968 1010 0.95
Sequence Information
- Coding Sequence
- ATGAGCGACCAATATTGCCTAAAATGGAACAACCATCACACGACGATTGTGGCCGTATTCGACAAATTGTTCGAGTGCGAGTCATTAGTGGACTGCACCCTGGCCGCCGAAGGCAAATATCTCAAAGCTCACAAAGTTGTTCTCTCGGCGTGTAGCTCGTACCTTGAGGATCTTTTACAAAGTCATGAAGATAAGCATCCCATCCTGATTTTCAATGACATTTCCTACGTTGAACTCAAAGCTATGCTGGAGTACATGTACCGAGGCGAAGTCAACGTGTCTCAAGATCAACTTAACACGTTTCTCAAAGCCGCCGAGGCCCTTCGAATCAAAGGTTTAACAACAGATCAGGGTGGTGGAGGAGGCGGAGGTGGATCGTCGTCCGACGGTGATGGCGGTGGCAACGAGCTGAAGCGAAAAGCTTCCAAGAAAGAGCCATCATCCGGTGGCAACGCCAGCTCGTCAGCTCGAGCCCATAGTCCAGCCCTTGGAACAACAACGACGACGTCGAACGATCGACCCTCGTCGCCCAAAAGGAAACGACGAGCTTCATCGCGCGACGAGAATTTTGCCAACGACTCCAATTCTTACGACACCGCTCCGACGCCTCCTTCCTCAGGACAGAACGCAGTTACCAAACTGGAAGAAAAGCTGAGATTAAAACGTGAAAGTTCGGAAACCCCTTCGGCCGCCAGTTCTCACGGTGGCGTACCTCATAAACTCCTTCAACCCAAGACTGAATTCATTGAGGATCCTAGCAATGTCGAAGACGTTTCTTTAGAGGATGAAGAGGATTATGGTCCAAATCCTGGCACTTCGCAGGCCTCGTTCTCTAGCCAAGACTTTAATAGTTGGCAGATGGGCGAGACGACGGGTGATGAGGTTTTTATGGGTCAACATGAAATGAATAATACGGCTGGTAACTCTCAAGCCTCCACTAATAACACTCTACCAGCCACTGTTGTCGTTCATCAACAACAACGCACCACCGCTGACGACGACTCGTCATCCAGTGGCGCCGTTGATATGGTTTGCGGAAGTCAGGCATCGGCCGCCGTGACCGCGGCTGAAACTGCTGGCGAAGCCACCGGTCAACACTATTGTCTACGATGGAACAACTATCAAtcgaatatgacgtcagtttttCATCATTTGCTTCGAACTCAGGCCTTCGTTGACGTGACTCTCGCCTGTGATGATCAGTCCTTGAAGGCTCACAAAGTGGTGTTGTCCGCTTGTTCTTCCTACTTTCAAAAATTACTCTTGGAAAACCCATGCAAGCACCCTACGATTATAATGCCCCAGGACGTTTGCTACGCCGATTTAAAATTTATCATTGAGTTCGTTTACAAGGGGGAAATAGATGTGTCTCAAACTCAACTCCAGTCACTACTGAAAACGGCCGATCAGCTCAAAATCAAAGGCCTGTGCGAGGTGCCAGACGGCAAGTCCGGTGCTGAAGTGACGCCGCTTATCTTACCCGCGTCGCCGCCTCCCTCGTCGCATCGGTTGTCTGGTTGTTTGAACGGCGTGAGCGGGGGAGGGAGAAGTGACGGTGTTGGGATGATTGGTGCCAGTTCGGCTAGCGgtggggtggtggtgggtggtCGCCGGCGACGACTCAGCTCGAGCTGTGCTGGTGGATCAGGACCGGGAGTTGGAGCGAAACGTCGTTTGTACAGGGACCGCCCGAATCATCATTTGAGAGATGATGGAAATTCGAATGAGGGAATTGAAGGCCATCCCGTCGACATAGCCGAGGAAGCTGGAGACGGTAAGGACCGACTTGCTCCGCAGCTGGTGGTAGTTGACCCTCAAGGAAGACTAGCCGAGGCTATCGTTCTGACGACGGCCAGTTCAGCACAATCTGCGGCTCCTCATCATCATATTCAACAACCTTCTCAAGCCCAGGCCCATACGACCGCTGCTCAGTCAACTTCCAAAAGTGAACACCACGATTCGTCGTCCCGTTTGGCTACTGAGGAACAGCTGATATCTGTGGAAAGACAGAACGGCGTTGTTATTGATCCACTGGATGCGCCAACGTCTGAACCTCCCGCACCATCGGCCACTTTGGTGTCCACTCAAATAGAATTGCCTCAACCCGAATCGACTACGCGGCGTGACATAGCAATCGATTCGAGTGACTTGAGCATAGAAGAAAACGGTGGAGTGAAAGTAAAATTCGAAACATTAAGAGCTATGGAACATCATCACCACATGGATATGGAAGCGGCCGCCCGTATGAGTGACGAAGGAGACCATCATGGCATGCACACAATGATGATCACACCCGAACTTCTTGGTTTGATCCCATCTTCTAACTCGGAAAGCAGCGAAACGGACTCGAAGTCTCATTCAAACTCATCCACAATGGCTTCATCCTCAATGACTCCTGGCGTCGGTGGAAAAACTTGGAGCTCAGAAGATATGGACGCAGCACTGGAAGCTCTTCGTAAACAAACTATGTCTTTAAGTAAAGCCTCAGCTCTCTACGGCATTCCGTCAACCACACTTTGGCAGCGTGCACACCGGCTCGGTATTGACACACCGAAAAAAGAGGGCCCAACCAAGTCGTGGACTGAAGACAATTTGAACACGGCTCTGGACGCCCTTAGGACTGGTACGCTGTCAGCCAACAAGGCGAGTAAAGCTTTCGGCATTCCTAGTAGCACTCTGTATAAAATCGCGCGCCGCGAAGGAATACGACTGGCAGCGCCGTTCAATGCTGCGCCCACATCCTGGGTCCCAGAGGATTTAGAAAGAGCACTCGAATCAATACGTTCTGGCCAGTATACCGTTCAAAGAGCCGCGACTGAGTATGGCATTCCTTCTGGAACTCTTTACGGACGTTGTAAACGCGAGGGGATAGAACTGTCTCGGAATAATCCAACTCCTTGGAGCGAAGACGCCATGATGGAAGCACTAGAAGCCGTCCGTCTGGGTCACATGAGTATCAATCAAGCGGCCATACACTACAACCTGCCCTATTCATCCCTCTATGGCCGATTTAAACGAGTTAAATTCGATCCTGACGGCGTTCCAACGGGTGGCATGCACGGTGACAGTGAAGGAAGCACCGGTGATGTTATCACTGGGCCGCAACCTCCTCAAGCTCAGCCGGCTCCATCTGGACAGTCTCAGTCACAACAGCAGGCTACAACTTCGGCTCCTTCCCAACAACCGTCTCATCAAACCACCCCTCAAATCATGCTCGTCCAATACCAGCAACCCCTACATATGTATCAGTCGGCAACATGA
- Protein Sequence
- MSDQYCLKWNNHHTTIVAVFDKLFECESLVDCTLAAEGKYLKAHKVVLSACSSYLEDLLQSHEDKHPILIFNDISYVELKAMLEYMYRGEVNVSQDQLNTFLKAAEALRIKGLTTDQGGGGGGGGSSSDGDGGGNELKRKASKKEPSSGGNASSSARAHSPALGTTTTTSNDRPSSPKRKRRASSRDENFANDSNSYDTAPTPPSSGQNAVTKLEEKLRLKRESSETPSAASSHGGVPHKLLQPKTEFIEDPSNVEDVSLEDEEDYGPNPGTSQASFSSQDFNSWQMGETTGDEVFMGQHEMNNTAGNSQASTNNTLPATVVVHQQQRTTADDDSSSSGAVDMVCGSQASAAVTAAETAGEATGQHYCLRWNNYQSNMTSVFHHLLRTQAFVDVTLACDDQSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYADLKFIIEFVYKGEIDVSQTQLQSLLKTADQLKIKGLCEVPDGKSGAEVTPLILPASPPPSSHRLSGCLNGVSGGGRSDGVGMIGASSASGGVVVGGRRRRLSSSCAGGSGPGVGAKRRLYRDRPNHHLRDDGNSNEGIEGHPVDIAEEAGDGKDRLAPQLVVVDPQGRLAEAIVLTTASSAQSAAPHHHIQQPSQAQAHTTAAQSTSKSEHHDSSSRLATEEQLISVERQNGVVIDPLDAPTSEPPAPSATLVSTQIELPQPESTTRRDIAIDSSDLSIEENGGVKVKFETLRAMEHHHHMDMEAAARMSDEGDHHGMHTMMITPELLGLIPSSNSESSETDSKSHSNSSTMASSSMTPGVGGKTWSSEDMDAALEALRKQTMSLSKASALYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEDNLNTALDALRTGTLSANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTSWVPEDLERALESIRSGQYTVQRAATEYGIPSGTLYGRCKREGIELSRNNPTPWSEDAMMEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRVKFDPDGVPTGGMHGDSEGSTGDVITGPQPPQAQPAPSGQSQSQQQATTSAPSQQPSHQTTPQIMLVQYQQPLHMYQSAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00373221;
- 90% Identity
- iTF_00373221;
- 80% Identity
- iTF_00373221;