Basic Information

Gene Symbol
Kdm5b
Assembly
GCA_038030265.1
Location
CM075938.1:19004572-19016588[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-20 1.2e-16 62.0 0.0 3 88 260 340 258 341 0.94

Sequence Information

Coding Sequence
ATGGGTGGGGGTGTTGTTGGCGGCTCCAGTGGTGTCGGTGGTCCTACCATTTCGGGGAATATGGACGCGACCAAAACTAAACTTTTGAAGCGGTCACAATTACGACGATTCTTCACAAAAGCTTGTAATGAGTTTGAAACGATCGCCCCTGATGAGACAACATCGCCGCCCAAATTATTGGACGCTTGGCGCCAGGTTGAGGAGAAAGCGAGTCGCCTATTTCAATTGGACGATGAAGTGAGGGAAATGTTGTACGTGGAGCACTCGGGGGATGATAAACGACTGGAGGATGAGCTGGGTAAAGAGTTGGACGCAACTAGAATCTACCGTGATCGATGGGAGAGCATTAAAACTATTTCTGAGAAAGCGCTTAAGCGATTTGACGACATCGAAGACTTCAGGCGAGCGGCTTACGCGGCACCCAGTGGCGACTCTCTTCAGAATGACGCTGAATCCGACGAACATGTCCCTGATCTCACCTACTACCATCAAATGGACTACAGCAGTCCCGTCAAAAACCCTTCGCCTCGTAAATCGAAGCCCAGATTTGAATTCGTTCCACCCAAGGAGTGTCCAGTGTTTCGGCCTACACTTGAAGAATTCCAAGATCCACTAGAGTACATCAGTAAAATTAGACCGGTGGGTGAAGCCTGCGGAATTTGTAAAATCATTCCACCGACGGGTTGGCGAACGCCTTTCGCCATCGATATGGACAAGCTAAAGTTCACGCCGCGAATTCAAAGAATTAACGAGCTTGAGGCGAGGACAAGAATCAAACTGAATTTTAACGATCAGTTGACCAAGTTTTTCGCCCTGAGCGGGAAGACTTTTCAAGTGCCTGTGATGGAAAAAGCGGCCGTAGACCTTTGGACGCTTCACAGGACTGTGAAAGAGCTCGGAGGGATTAATGCGGTGAACCGGAATAGGTTGTGGACGGAAATTGCTACGCGGATGGGTTACGTTGGAAAGGCGGCCGGGTTTTGCTTGAAAAATCACTACGATAATTTGATTTTACCGTTTCTTTTGGCTCAAAAAGAACGGATCGATGAGaataaaaagaaggaaaacgGCGATAATAGCATTGGTGATAGCACGGACAAAGTAATGGATTTGATCGTAATAGATGACGACGTCGAGAATGGACACAGGAGCGGTGAAATTAAAGCCTGTATCACCACCCCGAGGTTATCGCAAAGAACCTTGTCTGTGCGGCGTGAGTTGAAAAGTTTGAGGTTTCTCGGCCCGGGCCCTAAGATGCCTGTATGTGAAGGTGGTGAGGACGACATCATGAAGTCAACGAGGACTCGAGGAAAGAAAATTATGTACGAGTTCGACCCCCTGGCTAGGTATTTGTGCAAAGGATGTCGAAAGGGAGACATCGAAGAAACTTTGGTCACGTGCGTTTCCTGCGAAGACCGTTACCACTGTTCATGCCTGATGCCTCCGTTGAACGCCAAAAACCCACCCGTGACCTGGCGGTGCCCCAAATGTGCCGCCTCTGACTCGTACAAACCCTTGGAAGAGTTTGGGTTTGCTCAAGCCGAGCGCGAGTACACTCTTCGTGAATTCCGTGAAATGGCGAATAAATTCAAAGAAGATTACTTCAAGACGGATTCGGATCAAGTTGCGACGAGTCGAGTTGAGCAGGAGTTTTGGAGGGTGGTTTCGTCTATTGAAGAGTCAGTCGTTGTGGAGTATGGAGCTGATCTTCACGTCATCGAGCACGGCTCCGCGTTCCCTCGCAAGGACCAGCCCTGCATCGTCGGTCTCGACCAACGCCTTTTCAACAAATACGCCGACTCAGCTTGGAACTTGAACAACCTCCCCGTTCTGAAATCCTCCGTTCTGCGGCACATCTCCGCCGATATTTCCGGCATGAAAATCCCCTGGATGTACGCCGGCATGTGCTTCGCTACCTTTTGCTGGCACAACGAGGACCACTGGAGCTATTCAATCAACTATCTTCATATGGGCGAGCCGAAGACTTGGTACGGTGTGCCTGGGTCGTGCGCCGAAGAGTTTGAAAAAGCCATGCAAGACGCCGCTCCTGAGCTTTTCGAGTGTCAACCAGACCTTCTTCACCAATTAGTGACGATAATGAACCCGAACGATTTCATAAACGCGGGAGTTCCGGTCTATCGAACGGATCAGAAAAAGGGAGAATTTGTCGTAACTTTCCCCCGCGCCTATCACGCTGGGTTCAACCAAGGTTTTAACTTCGCCGAAGCCTGCAATTTCGCTCCCCCCGACTGGCTTCACATCGGTCGCGAGTGCATCTCGCACTACTCCCAACTCGGACGATACTGCGTATTCTCCCACGATGAACTCGTTTGCAAGATGGCGATCAACTTTAAAGATTTAACGTCGGAGGAAAGTGAGGCTCTTGTCAAAGACCTGTCAATTATGGTTTCGACGGAGAGGCTGCGCAGAAATCGCGCACTTAAATACGGCGTCGGACAGGCTTTGAGCGTTCAGTTTGACAAACTCGCAGATGACGAGAGACAGTGTTGCGTGTGTAACACGACGGTTTTCCTTTCTGCTATTTGCTGCGACTGTAGCCCACGCCTCGTCTGCCTCGATCATATCAACAAATTGTGTAGCTGCAAGCCCGAAAACTATACAATGAAATATCAATTCAAACTTGACCTTCTCAACCAGATGGTCGCACTGCTGACAAAGCAGCTTTACAGGCTCGACGAGTGGAATGAAAAAGTTGTCGACGCCTTTAACAGGAAACCTCCAGACGAAAAACTCGACTTGAAAAATTTCACCGAGCTTCTCATGGTCGCGAAAGACAAGGATTTCCCCAATAGTGAACTTCTCACTCTTCTCGACTATCACGTTCGTCGAGCCCTAGAGTGTTCCGCCGTTGCCAAAGCCATCATCAACAACACGAACAATCACGAACAGAGTAAGATCACCGTCGAAGATTTAGAAATGTTCGTCGAAGAGCTGAACAATCTCCCCTGCAAGATCAGTGAGGAGGGTTTTATTGTCGAACTGTTGGACAAAAGTAGAAAATTCAGGCGAATGGTTCAGAAAGTGCTCAGACTTAAAATCGTGTCTAAATGGCGTGTcatggctcttttaaaaatggGGAAATCCTTGTGTTTGGATTTTCCAGATTTGGATGTGCTTGAAAAGAAACTTTGCGAGATTGAATGGTCTCAGAAAGTTGATGCTTCCATGAACCCCGGAAATTCGGGTATATCTGTAGAAACTTACGACAACCTAGTGAGGCAGATGAAAACCCTTCCATCATCCCCCTTAGTGAAGCGTAAAAAGCGAATTTTCCTCGCCTTTCTCAATTCGAGGGATTATCTCAGGAAACGATTCGCTGAAATTCTCCCGAATCGACCTCGATTTGAGCCGGTGGTACGGCCTGAAGTTATAGATCTGGACGTTGACGAACCTGAAGAATCGGTTGAATCGGACAAACATGCCTCTCAACCGGTTAGAACTCCCCCTAAGGTCGTGGATTTGGATGAGCGAGTGATTGAAGAATCAATTGAAACAGTCGAAATACCCGAAGAGCCGGATGACGTCACACCAAGTACGCTTCAAGAGCCCGAGCCTATTACGATAAGCAGCGCCGAGCCAGTCCCGCCGATTGCCTGCGTGACGCCTCAAGAAATTGAAATCGTCGATTGTGGACCTCCTCTCAGCAGCGCCTATCccccttctcctcctcctcctcctcctcaatcTGTAGTAGCCCTCcctccgccgccgccgccggtgAAGAAGAAACGTCGCCCGCGAAAGAAGAAGGTTGTAGCCGAAGACCCGAAGGAGTTCGTCGTTCGACTCATGTATCCCCCTCCTCCTATGGAACCTCCCGAAGAGATCGAAGCTCGGATCAAAGCAGTCCTTGACGGCTCTCTCGTCCTCTACTTGACTGACCTTGAAGAACTGCTCATCTGCGCCAAATATGTCCCTGTTCACAATCTCATGGAATTCGAGGACGCTGTCGCTCAGGTGCGCAACTGGGTCAATTCGGTGGGTAAAATCTTCTTGAAGGGCAACCGAGGGGGGACACTGATGCAATGCCTCTGGCCTCGTCTGTTCCTACCGAGAAACCGGCAACTCCAGCCCGATCAAATTATCGGCACGGCGGCGAACAACATGGAGGATCAAATTGAATTCAACGGCACCGATTTCCTGTTTGAAAACTTCAAAGCCGCCTATACGCGACAGTACAAATCGTTGTGTAGTGTTCGATACGCGAACGTGGTCGCGCGACGAGACGGCGAGCCTTCGTGTGTTTGCGGCGGTGTCATCAAAGAGTCCTCGTGTATCGTCTGCGAGCTGTGTCGAACTCACTTTCACAAAGTTTGTTTTAAACAGACGCTCGACTCTCGCTCCGTGTATTGTTTTCGATCTCGGAACATCTGTTCGTTTTGTAAACGAACCAACCGGCCACATTTGGACGACCTGTATGTGTGGGCGTCCACAGCTTTGAACTTGAAAGTGAAAATCCCCGAGTGTTACGCTCTCAACTATAATATTTTTTGCGTTGAAAAGTGGGAGAATGAAGTTAAAGCGCTAATGAGTGATGAAGAGATCAGTCGTTGCCTCAAGTCGGTCGTTGATTTCGTGGAAAACGCGTCGAAAAAAGATGAAATGCCCTTAACCGGTTTGTCATCTCTTCCACAAATCCGAAACTACGCGCATATCGAACTCCGTCAACATCTTATGATTGGTGACATGTTTGAAATTTCCTCGGTATATAAAGACCAACTGTGGCTCCTCGTCGATTCGCAAGCCCTCCGTCTTGAGCCGGATAGGATCATTCTCCAGTTGAGCCCGACCTCGTGCGGTGTCACCGACAAATCCAAAACTCTTTATCCCCATATGTTTACCGAGTCATCATCAACTGGGTCACTGTCGCCACCCCGTAAGAAACCCGGTCCTAAACCGAAACGACCCGCCGGCGATGGTGCTCCACGTGAGCGACGGAAAAAACGTACGTTTTCTGGCGTTCCTcgtaaaaaagttaaaaaaactcGGCAGAGTCTCCCCGACATTTTGGAAACGTCGTCTTCGGCTTGGGAAGAGCACGAACCCGAGTCGAACTGTGCGGCAGTTCATTGTCTCAAACCTCCGGATATGAATGTCGATTGGGTTCAATGCGATGGTCAGTGTAAACAGTGGTTTCACATGAAGTGCATCGATCTGGACAATGTTTCCGAAGAGGAGGAGTATGTATGCACGGCCTGTATCGAAACTCGCGTCTGCGAACAGGTCATCGAGGGTTTGGCCGATGGCGGTGATATTTTTGCCCTGTCGAAAACGCCGGCGATTGACGTCGTCGCCACCGTGACAAATGAGACTCCGATCGATTTGACGGACGATTTGATGACTGTcgaagatgatgatgatgacgatgatCCAGTCATCGTAGAGGAGCGCGTAAAGTCACCTTCAATTGACGTCCTGCtctattgttttgtttcagaCTATTTTCGTCATTTCGTCCACAAACTCGAAAATCCTGAACTCGACCTCCACAACGCCCTCAGCAAAATCCTTCCAGTGACCGAACAACTGGCCAGACTCAGCGACGGTATTATTCTGTTAGACAAGGAATTGCAAAGTCAAGTGTTAGACAAACACGAAGATTTAGTCTCGCAGGCCACCTGGGTTGATAAATTACAAGGGGTCCTATCGATAATGCACATTCATGTTCAGAGTCTTTTAAGCTCCGTCGAAAGGGTTCGCGTCAAAGTCATTGATCCATTCAATCAACTTGAGACGCAAACTCTCGTACTGTCACGACTCCACGAAACCACGGACCTGTTGCGGCGAGCGTCGCGAATTCAACAATTAGCTAAAAAACTCCCTGGACTCGACGCTTTGCGAGCGTCGCGTATTTTGTCAGAATTAGACGAACTCTACAAAGATGCCGACTTCGGAGATCTTGATATACTCGAAGAGGAGAGGAAGCAAATTAAAAAAGAAGCGGCTGCTGTTGAGAAAGAGGCTGTGAAAATGGTCGAAGGAGGTCTTACAAAGTCGGACGTGGACCTTGTGGCCGTCGGCGTGGAAATAATGGTAAACCGCGGTATTGCGGATGTTGAAATTCAGCGAATAATGGACTCCAGTTTGGAGAAAGTCGACCATGCGATACGAAAGGCCCTGGACATGGACAATCTGGTCCCTGTTACTACTCGAGGTGGTGCAGGTAGAGCTGCCGGTGTTAACATTCCGAGCAACATTCAGAATTTTCGGAATAAACTGTGGTCTAGCTGGGAGAATGTGTTGAATTCAGCCGTGCACTCAGCCTGCACTCAGATCGCTGTAATTCAAAAAGTGTTGAACGATGGTAAAGGGACAGACTACAGGAATGGTGGGCAGCGGTCGACGACAAGCGAAGTGGGTCACATTTTTTGGACTCAGGTAGATGACACTTTGAAGCGTCACTTGGTTCAAGCGGCTCAAGggtcatcTTATATGAAACAAGCGCTTGAAGGGGAATATCCGAAACTCCTACGGCTCCATCTTGATCtgcacaaaaaattgaaactctTGAATCCTACAGAAACCAGCTCGAAACATATTTTCCCCAATATgGGTAAATGCGTCAAACAGTTTGAAACAGCTTATCTCAGCCGCTCAGTGATGCTCATTCTGGACGCTGTTCGTGAAATGTTCCCTGAAGCGTCGGACTCGTCGTCACCATCGTCCACGGCCTCCGGTTTACCTTCATCAACCTCCTCATCATTATTATCAACACTCTCCTATAAACCACCGTCGACTGATCAAGTCGACGCGCTCGTCAAAACAATATCGAGTGAATTGAGCGTGTCGCTCGTCGACGAAGCGTTGACGGCTCCCGTCGCTAAAAATGTCTCCAAAGGGATTTCACTGTTTTGTCAAAAGAGCGAGGGGATGGTTGCGACAACGTCGGAAGCTACGCAAGTCATCGAATCGCCGAACTCCGCTCAAAAATTGAACGTTGAAATCGCCAATATCGTTTATTACATGTGTGAACAGGTTAAAAGCGTCGTCAACAACATGGGTTTGAATAAAAGCGTCGCGTCGAGCCTTCAAACGGCTCTCGCGGCTGCTGAAAATTTGACTCAGCAAATCCTAAATCCGCTTCTCGCTTCGATTCTCGTTGCTATTGAGTCCATCATACTGACAATTCACAAAGAGGACTTTAGCATaCAAGAATACAGCGGAAGTGTATCGCTGTACATGAAAGAACTACACGATTTTACCGCCCGTTCCGTCTCCACCTATTTAGCGCCGTACCAGAACCAAAAACAAGTGACTAATTCGTGCACTGAAGTTGCTTCCAGAGCTGTAGAATTCTTTCTAAGGCACGCAACTCTACTTCGTCCGTTGAGTGAGGCCGGCCGTAGGAAACTAGTTGCTGATTTTAAATTCTTTGAAGACGCCATCGCTCCCTTGTGCGTTCAATTGAGTGAGCTCGGAGCTGTTTATAGCGCGCTTCGATCCATTCGTCCCCTGATCATCGCTCCTATTGACGAAGTGACGTCATCCCCTGTCCTGGGGCAAGTCCTCCCCTACAGTTTGGTCATAACTCTGTTGTTTTCTCGAGGTCCTCCGGAACTACCATCGCCACATCAGaGCGTGGGCTGGCCCGTGAGCAAACTTTCGGAGTGGTTGGACAATCATACGAGCGAGAGGGATCGCCTCGAATTGCTGGCCGGTGCTTTGAAAAAGTACGAACAGAGTGTTTGCAGTCAGAATCGAGCGTCATTCCACGAGATTTATCCAGCGATTAAGTCGCTTTTGGAGAAGGCCACCAATAGCGTTTTCATTAAAAACCGTTAA
Protein Sequence
MGGGVVGGSSGVGGPTISGNMDATKTKLLKRSQLRRFFTKACNEFETIAPDETTSPPKLLDAWRQVEEKASRLFQLDDEVREMLYVEHSGDDKRLEDELGKELDATRIYRDRWESIKTISEKALKRFDDIEDFRRAAYAAPSGDSLQNDAESDEHVPDLTYYHQMDYSSPVKNPSPRKSKPRFEFVPPKECPVFRPTLEEFQDPLEYISKIRPVGEACGICKIIPPTGWRTPFAIDMDKLKFTPRIQRINELEARTRIKLNFNDQLTKFFALSGKTFQVPVMEKAAVDLWTLHRTVKELGGINAVNRNRLWTEIATRMGYVGKAAGFCLKNHYDNLILPFLLAQKERIDENKKKENGDNSIGDSTDKVMDLIVIDDDVENGHRSGEIKACITTPRLSQRTLSVRRELKSLRFLGPGPKMPVCEGGEDDIMKSTRTRGKKIMYEFDPLARYLCKGCRKGDIEETLVTCVSCEDRYHCSCLMPPLNAKNPPVTWRCPKCAASDSYKPLEEFGFAQAEREYTLREFREMANKFKEDYFKTDSDQVATSRVEQEFWRVVSSIEESVVVEYGADLHVIEHGSAFPRKDQPCIVGLDQRLFNKYADSAWNLNNLPVLKSSVLRHISADISGMKIPWMYAGMCFATFCWHNEDHWSYSINYLHMGEPKTWYGVPGSCAEEFEKAMQDAAPELFECQPDLLHQLVTIMNPNDFINAGVPVYRTDQKKGEFVVTFPRAYHAGFNQGFNFAEACNFAPPDWLHIGRECISHYSQLGRYCVFSHDELVCKMAINFKDLTSEESEALVKDLSIMVSTERLRRNRALKYGVGQALSVQFDKLADDERQCCVCNTTVFLSAICCDCSPRLVCLDHINKLCSCKPENYTMKYQFKLDLLNQMVALLTKQLYRLDEWNEKVVDAFNRKPPDEKLDLKNFTELLMVAKDKDFPNSELLTLLDYHVRRALECSAVAKAIINNTNNHEQSKITVEDLEMFVEELNNLPCKISEEGFIVELLDKSRKFRRMVQKVLRLKIVSKWRVMALLKMGKSLCLDFPDLDVLEKKLCEIEWSQKVDASMNPGNSGISVETYDNLVRQMKTLPSSPLVKRKKRIFLAFLNSRDYLRKRFAEILPNRPRFEPVVRPEVIDLDVDEPEESVESDKHASQPVRTPPKVVDLDERVIEESIETVEIPEEPDDVTPSTLQEPEPITISSAEPVPPIACVTPQEIEIVDCGPPLSSAYPPSPPPPPPQSVVALPPPPPPVKKKRRPRKKKVVAEDPKEFVVRLMYPPPPMEPPEEIEARIKAVLDGSLVLYLTDLEELLICAKYVPVHNLMEFEDAVAQVRNWVNSVGKIFLKGNRGGTLMQCLWPRLFLPRNRQLQPDQIIGTAANNMEDQIEFNGTDFLFENFKAAYTRQYKSLCSVRYANVVARRDGEPSCVCGGVIKESSCIVCELCRTHFHKVCFKQTLDSRSVYCFRSRNICSFCKRTNRPHLDDLYVWASTALNLKVKIPECYALNYNIFCVEKWENEVKALMSDEEISRCLKSVVDFVENASKKDEMPLTGLSSLPQIRNYAHIELRQHLMIGDMFEISSVYKDQLWLLVDSQALRLEPDRIILQLSPTSCGVTDKSKTLYPHMFTESSSTGSLSPPRKKPGPKPKRPAGDGAPRERRKKRTFSGVPRKKVKKTRQSLPDILETSSSAWEEHEPESNCAAVHCLKPPDMNVDWVQCDGQCKQWFHMKCIDLDNVSEEEEYVCTACIETRVCEQVIEGLADGGDIFALSKTPAIDVVATVTNETPIDLTDDLMTVEDDDDDDDPVIVEERVKSPSIDVLLYCFVSDYFRHFVHKLENPELDLHNALSKILPVTEQLARLSDGIILLDKELQSQVLDKHEDLVSQATWVDKLQGVLSIMHIHVQSLLSSVERVRVKVIDPFNQLETQTLVLSRLHETTDLLRRASRIQQLAKKLPGLDALRASRILSELDELYKDADFGDLDILEEERKQIKKEAAAVEKEAVKMVEGGLTKSDVDLVAVGVEIMVNRGIADVEIQRIMDSSLEKVDHAIRKALDMDNLVPVTTRGGAGRAAGVNIPSNIQNFRNKLWSSWENVLNSAVHSACTQIAVIQKVLNDGKGTDYRNGGQRSTTSEVGHIFWTQVDDTLKRHLVQAAQGSSYMKQALEGEYPKLLRLHLDLHKKLKLLNPTETSSKHIFPNMGKCVKQFETAYLSRSVMLILDAVREMFPEASDSSSPSSTASGLPSSTSSSLLSTLSYKPPSTDQVDALVKTISSELSVSLVDEALTAPVAKNVSKGISLFCQKSEGMVATTSEATQVIESPNSAQKLNVEIANIVYYMCEQVKSVVNNMGLNKSVASSLQTALAAAENLTQQILNPLLASILVAIESIILTIHKEDFSIQEYSGSVSLYMKELHDFTARSVSTYLAPYQNQKQVTNSCTEVASRAVEFFLRHATLLRPLSEAGRRKLVADFKFFEDAIAPLCVQLSELGAVYSALRSIRPLIIAPIDEVTSSPVLGQVLPYSLVITLLFSRGPPELPSPHQSVGWPVSKLSEWLDNHTSERDRLELLAGALKKYEQSVCSQNRASFHEIYPAIKSLLEKATNSVFIKNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-